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The map label for this gene is 17546839

Identifier: 17546839

GI number: 17546839

Start: 2297105

End: 2298091

Strand: Direct

Name: 17546839

Synonym: RSc2120

Alternate gene names: NA

Gene position: 2297105-2298091 (Clockwise)

Preceding gene: 17546838

Following gene: 17546840

Centisome position: 61.81

GC content: 66.87

Gene sequence:

>987_bases
ATGACCTCTCCTCGAACGACAGCCATGACCCACAAGAACTATCCGCGCGATCTCATCGGTTACGGCAAGACCCCGCCCGA
CCCCAAATGGCCCGGCGGCGCGCGCATCGCCCTGCAGTTCGTCCTCAACTACGAAGAAGGCGGCGAGAACTGCGTGCTGC
ACGGCGACGCGGGCTCCGAGCCGTTCCTCTCCGAGATCATCGGCGCAGCAGCCTACCCGGCGCGGCACATGAGCATGGAG
AGCCTCTATGAGTACGGCGCGCGCGCAGGCGTCTGGCGCATCCTGCGCGAGTTCGAACAGCGCGGCCTGCCGCTGACGAT
CTTTGGCGTGTCGATGGCGCTGCAGCGCCATCCGGATGTGACGCAGGCCTTTGTAGACCTGGGCCACGAGATCGCCTGCC
ACGGCTGGCGCTGGATCCACTACCAGCACATCGACGAAGCCACCGAGCGCGAGCACATGCGCATCGGCGTGGAGATCATC
CGCGAGCTGACGGGCAGCGCGCCGCTGGGCTGGTACACCGGCCGCGACAGCCCCAACACGCGCCGCCTCGTCGTCGAGCA
CGGCGGCTTCGTCTACGACGCCGACTACTACGGCGACGACCTGCCCTTCTGGACCGAGGTCGAAACCTCCGTGGGCGAGC
GCAAGCCGCACCTGGTGGTGCCCTACACGCTCGACACCAACGACATGCGCTTCGCCAGCCCGCAGGGCTTCAACACCGCC
GACCACTTCTACCAGTACCTGAAGGACGCCTTCGACGTGCTGTACGAGGAAGGCGACCCCGACGGCCTGGCGCAGCCGAA
GATGCTGTCGATCGGCATGCACTGCCGCCTGCTGGGCCGTCCGGCGCGCTTGCGCGCGCTGCAGCGCTTTCTCGACTACG
TGCAATCGCACGACAAGGTGTGGATCTGCCGGCGCATCGATATCGCCCGCCACTGGATCGAACACCATCCGTACGCTGGC
CACCCCGTCCCGAGCACCGCCGCATGA

Upstream 100 bases:

>100_bases
ACCGTCGCCTGGTCACGCTGGAGCTCGGCGCCCATCTGAGCGTTCACCGCAAGCTTGCGCTGGAGCTGGCGCAGACCGCC
CGGGCCGTTCCGGCCTCCGC

Downstream 100 bases:

>100_bases
GCCAGACCGCTGCCCCCCTCGCCCAGCTCAACGCCATGGACACCGCGCAGTTCGTGCGCACGCTGGGCGGCATCTACGAG
CACTCGCCATGGGTGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Uricase; Polysaccharide Deacetylase Domain Protein; Hydrolase; Deacetylase

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTSPRTTAMTHKNYPRDLIGYGKTPPDPKWPGGARIALQFVLNYEEGGENCVLHGDAGSEPFLSEIIGAAAYPARHMSME
SLYEYGARAGVWRILREFEQRGLPLTIFGVSMALQRHPDVTQAFVDLGHEIACHGWRWIHYQHIDEATEREHMRIGVEII
RELTGSAPLGWYTGRDSPNTRRLVVEHGGFVYDADYYGDDLPFWTEVETSVGERKPHLVVPYTLDTNDMRFASPQGFNTA
DHFYQYLKDAFDVLYEEGDPDGLAQPKMLSIGMHCRLLGRPARLRALQRFLDYVQSHDKVWICRRIDIARHWIEHHPYAG
HPVPSTAA

Sequences:

>Translated_328_residues
MTSPRTTAMTHKNYPRDLIGYGKTPPDPKWPGGARIALQFVLNYEEGGENCVLHGDAGSEPFLSEIIGAAAYPARHMSME
SLYEYGARAGVWRILREFEQRGLPLTIFGVSMALQRHPDVTQAFVDLGHEIACHGWRWIHYQHIDEATEREHMRIGVEII
RELTGSAPLGWYTGRDSPNTRRLVVEHGGFVYDADYYGDDLPFWTEVETSVGERKPHLVVPYTLDTNDMRFASPQGFNTA
DHFYQYLKDAFDVLYEEGDPDGLAQPKMLSIGMHCRLLGRPARLRALQRFLDYVQSHDKVWICRRIDIARHWIEHHPYAG
HPVPSTAA
>Mature_327_residues
TSPRTTAMTHKNYPRDLIGYGKTPPDPKWPGGARIALQFVLNYEEGGENCVLHGDAGSEPFLSEIIGAAAYPARHMSMES
LYEYGARAGVWRILREFEQRGLPLTIFGVSMALQRHPDVTQAFVDLGHEIACHGWRWIHYQHIDEATEREHMRIGVEIIR
ELTGSAPLGWYTGRDSPNTRRLVVEHGGFVYDADYYGDDLPFWTEVETSVGERKPHLVVPYTLDTNDMRFASPQGFNTAD
HFYQYLKDAFDVLYEEGDPDGLAQPKMLSIGMHCRLLGRPARLRALQRFLDYVQSHDKVWICRRIDIARHWIEHHPYAGH
PVPSTAA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37432; Mature: 37300

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPRTTAMTHKNYPRDLIGYGKTPPDPKWPGGARIALQFVLNYEEGGENCVLHGDAGSE
CCCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCC
PFLSEIIGAAAYPARHMSMESLYEYGARAGVWRILREFEQRGLPLTIFGVSMALQRHPDV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCH
TQAFVDLGHEIACHGWRWIHYQHIDEATEREHMRIGVEIIRELTGSAPLGWYTGRDSPNT
HHHHHHCCCCEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC
RRLVVEHGGFVYDADYYGDDLPFWTEVETSVGERKPHLVVPYTLDTNDMRFASPQGFNTA
CEEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEECCCCCCCHH
DHFYQYLKDAFDVLYEEGDPDGLAQPKMLSIGMHCRLLGRPARLRALQRFLDYVQSHDKV
HHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCEEEECCCHHHHHHHHHHHHHHHCCCCE
WICRRIDIARHWIEHHPYAGHPVPSTAA
EEEEHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSPRTTAMTHKNYPRDLIGYGKTPPDPKWPGGARIALQFVLNYEEGGENCVLHGDAGSE
CCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCC
PFLSEIIGAAAYPARHMSMESLYEYGARAGVWRILREFEQRGLPLTIFGVSMALQRHPDV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCH
TQAFVDLGHEIACHGWRWIHYQHIDEATEREHMRIGVEIIRELTGSAPLGWYTGRDSPNT
HHHHHHCCCCEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC
RRLVVEHGGFVYDADYYGDDLPFWTEVETSVGERKPHLVVPYTLDTNDMRFASPQGFNTA
CEEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCEECCCCCCCHH
DHFYQYLKDAFDVLYEEGDPDGLAQPKMLSIGMHCRLLGRPARLRALQRFLDYVQSHDKV
HHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCEEEECCCHHHHHHHHHHHHHHHCCCCE
WICRRIDIARHWIEHHPYAGHPVPSTAA
EEEEHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA