| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is atzB [H]
Identifier: 17546838
GI number: 17546838
Start: 2295684
End: 2297108
Strand: Direct
Name: atzB [H]
Synonym: RSc2119
Alternate gene names: 17546838
Gene position: 2295684-2297108 (Clockwise)
Preceding gene: 17546837
Following gene: 17546839
Centisome position: 61.77
GC content: 72.56
Gene sequence:
>1425_bases ATGACCACCCACCGCACCAGCTCCGACCCGCTCCTGATCGCCCGCCACGCCGACGTGCTGGTCACCATGGACGCGCAGCG CCGCGAGATCGCCGACGGCGCGCTGGTGGCGCGCTGCGGCGTGATCGAGTGGGTCGGCGCCACCGCCGACCTGCCCGTGC CCTACCGCGACGCGATCGGCCGCCCCAACGTGCGCGTGCTGGAACTGCGCGACCACGTGGTCACGCCCGGCCTGGTCAAC ACGCACCACCACATGGCCCAGAGCCTGACGCGCGCCCTGCCCGCCGCGCAGGATGCCGAGCTGTTCGGCTGGCTCACCCA CCTGTATCCGGTGTGGGCGGGCCTGACGCCGGAGATGGTGCGCGTGTCGACGCTCACCGCGATGGCCGAGCTGATGCTGT CGGGCTGCACGACTTCGAGCGATCACCTGTATCTGTATCCCAACGGCTGCCGGCTCGACGATGCGATCGAGGCCGCGCGG CAGATCGGCATGCGCTTTCACGCCGCGCGCGGCAGCATGAGCGTTGGCCGCAGCCAGGGCGGGCTGCCGCCGGACCGCGT GGTCGAGGGCGAGCCCGCCATCCTGCGCGAAACCCAGCGCCTGATCGAGACCTGGCACGACGCCGACCGCCATGCGATGC TGCGCATCGTCGTGGCGCCCTGCTCGCCGTTCTCGGTGTCGCGCGACCTGATGCGCGAATCGGCGCGGCTGGCGCGCAGC TACGGCGTGTCGATGCACACCCACCTGGCCGAGAACGACAGCGACATCGCCTACTCGCGCGAGCGGTTCGGCATGACGCC CGCCGAATACGCTGAAGACCTCGGCTGGGTCGGCCACGACGTCTGGCATGCGCACTGCGTCAAGCTGGACGCGCACGGCA TCGAGCTGTTCGCGCGCACCGGCACCGGGGTGGCCCACTGCCCGTGCTCGAACATGCGGCTCGCCTCGGGCATCGCGCCC GTGCGCGCCATGCGCGATGCCGGGGCGCCGGTCGGCCTGGGGGTGGACGGCAGCGCGTCGAACGACGGCGCCCACATGCT CGGCGAGGCGCGCCAGGCGATGCTGCTGGCGCGCGTCGGTTTCGGCCCGGCGGCGATGGGCGCGCGCGAGGCGCTGGAGA TCGCCACGCTGGGCGGCGCCTGCGTGCTCAACCGCGACGACATCGGCGCGCTCGCGCCCGGCATGTCGGCCGACTTTGTC AGCTTCGACCGCCGCCAGGTCGGCTTTGCCGGCGCGGACCACGACCCGGTCGCGGCGCTGGTGTTCTGCGCGCCGTCCGG CGTGTCGCACAGCGTGATCAACGGGCGCGTGGTGGTCGACAACCGTCGCCTGGTCACGCTGGAGCTCGGCGCCCATCTGA GCGTTCACCGCAAGCTTGCGCTGGAGCTGGCGCAGACCGCCCGGGCCGTTCCGGCCTCCGCATGA
Upstream 100 bases:
>100_bases CTGGTGGCGGTGATCCTGAACCTGTACTACAACGGCATGCAGCCGGCCGAGCACGCCATGCGCGCGGCCGCGGCCACCAC GCACAGCGCGGAGTGAGCGC
Downstream 100 bases:
>100_bases CCTCTCCTCGAACGACAGCCATGACCCACAAGAACTATCCGCGCGATCTCATCGGTTACGGCAAGACCCCGCCCGACCCC AAATGGCCCGGCGGCGCGCG
Product: hydroxydechloroatrazine ethylaminohydrolase
Products: NA
Alternate protein names: Hydroxyatrazine hydrolase [H]
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MTTHRTSSDPLLIARHADVLVTMDAQRREIADGALVARCGVIEWVGATADLPVPYRDAIGRPNVRVLELRDHVVTPGLVN THHHMAQSLTRALPAAQDAELFGWLTHLYPVWAGLTPEMVRVSTLTAMAELMLSGCTTSSDHLYLYPNGCRLDDAIEAAR QIGMRFHAARGSMSVGRSQGGLPPDRVVEGEPAILRETQRLIETWHDADRHAMLRIVVAPCSPFSVSRDLMRESARLARS YGVSMHTHLAENDSDIAYSRERFGMTPAEYAEDLGWVGHDVWHAHCVKLDAHGIELFARTGTGVAHCPCSNMRLASGIAP VRAMRDAGAPVGLGVDGSASNDGAHMLGEARQAMLLARVGFGPAAMGAREALEIATLGGACVLNRDDIGALAPGMSADFV SFDRRQVGFAGADHDPVAALVFCAPSGVSHSVINGRVVVDNRRLVTLELGAHLSVHRKLALELAQTARAVPASA
Sequences:
>Translated_474_residues MTTHRTSSDPLLIARHADVLVTMDAQRREIADGALVARCGVIEWVGATADLPVPYRDAIGRPNVRVLELRDHVVTPGLVN THHHMAQSLTRALPAAQDAELFGWLTHLYPVWAGLTPEMVRVSTLTAMAELMLSGCTTSSDHLYLYPNGCRLDDAIEAAR QIGMRFHAARGSMSVGRSQGGLPPDRVVEGEPAILRETQRLIETWHDADRHAMLRIVVAPCSPFSVSRDLMRESARLARS YGVSMHTHLAENDSDIAYSRERFGMTPAEYAEDLGWVGHDVWHAHCVKLDAHGIELFARTGTGVAHCPCSNMRLASGIAP VRAMRDAGAPVGLGVDGSASNDGAHMLGEARQAMLLARVGFGPAAMGAREALEIATLGGACVLNRDDIGALAPGMSADFV SFDRRQVGFAGADHDPVAALVFCAPSGVSHSVINGRVVVDNRRLVTLELGAHLSVHRKLALELAQTARAVPASA >Mature_473_residues TTHRTSSDPLLIARHADVLVTMDAQRREIADGALVARCGVIEWVGATADLPVPYRDAIGRPNVRVLELRDHVVTPGLVNT HHHMAQSLTRALPAAQDAELFGWLTHLYPVWAGLTPEMVRVSTLTAMAELMLSGCTTSSDHLYLYPNGCRLDDAIEAARQ IGMRFHAARGSMSVGRSQGGLPPDRVVEGEPAILRETQRLIETWHDADRHAMLRIVVAPCSPFSVSRDLMRESARLARSY GVSMHTHLAENDSDIAYSRERFGMTPAEYAEDLGWVGHDVWHAHCVKLDAHGIELFARTGTGVAHCPCSNMRLASGIAPV RAMRDAGAPVGLGVDGSASNDGAHMLGEARQAMLLARVGFGPAAMGAREALEIATLGGACVLNRDDIGALAPGMSADFVS FDRRQVGFAGADHDPVAALVFCAPSGVSHSVINGRVVVDNRRLVTLELGAHLSVHRKLALELAQTARAVPASA
Specific function: Catalyzes the deamination reaction of hydroxyatrazine to N-isopropylammelide (dihydroxy-isopropyl-atrazine). The enzyme is also capable of catalyzing some dechlorinating reactions [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=347, Percent_Identity=23.0547550432277, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1789249, Length=431, Percent_Identity=28.3062645011601, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI87082177, Length=416, Percent_Identity=23.7980769230769, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319963, Length=353, Percent_Identity=25.4957507082153, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI24643849, Length=346, Percent_Identity=25.7225433526012, Blast_Score=83, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.99.3 [H]
Molecular weight: Translated: 50849; Mature: 50717
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHRTSSDPLLIARHADVLVTMDAQRREIADGALVARCGVIEWVGATADLPVPYRDAIG CCCCCCCCCCEEEEECCCEEEEECCHHHHHHCCHHHHHCCHHEECCCCCCCCCCHHHHCC RPNVRVLELRDHVVTPGLVNTHHHMAQSLTRALPAAQDAELFGWLTHLYPVWAGLTPEMV CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHH RVSTLTAMAELMLSGCTTSSDHLYLYPNGCRLDDAIEAARQIGMRFHAARGSMSVGRSQG HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCC GLPPDRVVEGEPAILRETQRLIETWHDADRHAMLRIVVAPCSPFSVSRDLMRESARLARS CCCHHHEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHH YGVSMHTHLAENDSDIAYSRERFGMTPAEYAEDLGWVGHDVWHAHCVKLDAHGIELFART HCCEEEEEECCCCCCHHCCHHHCCCCHHHHHHHHCCCCHHHHEEEEEEEECCCEEEEEEC GTGVAHCPCSNMRLASGIAPVRAMRDAGAPVGLGVDGSASNDGAHMLGEARQAMLLARVG CCCEEECCCCCCCHHCCCHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCC FGPAAMGAREALEIATLGGACVLNRDDIGALAPGMSADFVSFDRRQVGFAGADHDPVAAL CCHHHCCHHHHHHHEECCCEEEECCCCCCCCCCCCCCHHHHCCCHHCCCCCCCCCCEEEE VFCAPSGVSHSVINGRVVVDNRRLVTLELGAHLSVHRKLALELAQTARAVPASA EEECCCCCCCCEECCEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTHRTSSDPLLIARHADVLVTMDAQRREIADGALVARCGVIEWVGATADLPVPYRDAIG CCCCCCCCCEEEEECCCEEEEECCHHHHHHCCHHHHHCCHHEECCCCCCCCCCHHHHCC RPNVRVLELRDHVVTPGLVNTHHHMAQSLTRALPAAQDAELFGWLTHLYPVWAGLTPEMV CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHH RVSTLTAMAELMLSGCTTSSDHLYLYPNGCRLDDAIEAARQIGMRFHAARGSMSVGRSQG HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCC GLPPDRVVEGEPAILRETQRLIETWHDADRHAMLRIVVAPCSPFSVSRDLMRESARLARS CCCHHHEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHH YGVSMHTHLAENDSDIAYSRERFGMTPAEYAEDLGWVGHDVWHAHCVKLDAHGIELFART HCCEEEEEECCCCCCHHCCHHHCCCCHHHHHHHHCCCCHHHHEEEEEEEECCCEEEEEEC GTGVAHCPCSNMRLASGIAPVRAMRDAGAPVGLGVDGSASNDGAHMLGEARQAMLLARVG CCCEEECCCCCCCHHCCCHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCC FGPAAMGAREALEIATLGGACVLNRDDIGALAPGMSADFVSFDRRQVGFAGADHDPVAAL CCHHHCCHHHHHHHEECCCEEEECCCCCCCCCCCCCCHHHHCCCHHCCCCCCCCCCEEEE VFCAPSGVSHSVINGRVVVDNRRLVTLELGAHLSVHRKLALELAQTARAVPASA EEECCCCCCCCEECCEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9055410 [H]