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The map label for this gene is mmgC [H]

Identifier: 17546764

GI number: 17546764

Start: 2218315

End: 2219511

Strand: Reverse

Name: mmgC [H]

Synonym: RSc2045

Alternate gene names: 17546764

Gene position: 2219511-2218315 (Counterclockwise)

Preceding gene: 17546765

Following gene: 17546763

Centisome position: 59.72

GC content: 65.58

Gene sequence:

>1197_bases
ATGGATCTGAACTACTCGGCGGCCGACGATGCGTTCCGTCAGGAAGTCCGCGGCTGGCTGGAAGCCGAACTGCCCAAGGA
CATCCAGGACAAGGTGCTGAACCACCGCCGCCTGAACCGCGACGATTTCGTCCGCTGGCACAAGGCGTTGGCGGCCAAGG
GCTGGTCGGTGCCGCACTGGCCGGTCGAGTGGGGCGGCACCGGCTGGAGCCCGATCCAGAAGCACATCTGGGACGAGGAA
TGCGCACGCATCGGCGCGCCGGGCGTGCTGCCGTTCGGCGTCAGCATGGTGGCGCCCGTCATCATGAAGTACGGCAACGA
GGCACAGAAGCGCTATTACCTGCCGCGCATCCTCGACTGCACCGACTGGTGGTGCCAGGGCTACTCCGAGCCCGGCTCCG
GCTCCGATCTCGCTTCGCTCAAGACCCGCGCCGTGCGCGAGGGCGACCACTACATCGTCAACGGCCAGAAGACCTGGACC
ACGCTCGGCCAGCACGCCGACATGATCTTCTGCCTTGTGCGCACCGATCCGCAGGCCAAGATGCAGGAGGGCATCTCGTT
CCTGCTGATCGACATGAAGACGCCGGGCATCACCGTTCGGCCGATCATCATGCTGGACGAAGAGCACGAAGTGAACGAGG
TGTTCTTCGACAACGTGCGCGTGCCGGCCGAGAACCTGATCGGCGAAGAGAACCGTGGCTGGACGTACGCCAAATACCTG
CTGGGCCACGAGCGGACCGGCATCGCGCGCGTGGGGCATTCGAAGCGCGAGCTGGCGTTCCTCAAGCGCGTCGCCCTGCA
GCACCAGAAGAACGGCAGGCCGCTGCTGGAAGACCCGGTGTTCGCGGCCAAGGTGGCATCGCTGGAGATCGAGCTGATGG
CGCTGGAGATCACTGTGCTGCGTGTGGTGTCGAGCGAGGGCGTGGGCCGGGGGCCGGGCCCCGAGGCGTCGCTGCTCAAG
ATCAAGGGCACGCAGATCCAGCAGATGCTGACCGAGCTGATGGTCGAGGCGGTGGGCCCGTATGCGCAGCCGTTCGACCC
GGACTACCTGGAAGGCGAGACGCCGCGCGCCGTCACCGGCGACAACGATGCCGCGCCGCTGGCGCCGTACTACTTCAACT
ATCGCAAGACCTCGATCTACGGCGGGTCGAACGAGATCCAGCGCAACATCATCAGCCAGATGATCCTCGGCGTCTGA

Upstream 100 bases:

>100_bases
TCAAGCAGCCTGTGCACTAGTCGCGCGCAATCAGGTCCGCGCCGGTCCGAAGCACGCTCCGCCGGTTGCCGCGGCGGTGG
CGACACCACAGGAGACAGGC

Downstream 100 bases:

>100_bases
CCAGAACGAACAGCGGAGACAACCATGGATTTCTCGTTCACCGACGAACAGAAGCAGCTGGCGGATGCGGTACGCCGCTT
CATCGACAAGGATTACGGCT

Product: acyl-CoA dehydrogenase oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MDLNYSAADDAFRQEVRGWLEAELPKDIQDKVLNHRRLNRDDFVRWHKALAAKGWSVPHWPVEWGGTGWSPIQKHIWDEE
CARIGAPGVLPFGVSMVAPVIMKYGNEAQKRYYLPRILDCTDWWCQGYSEPGSGSDLASLKTRAVREGDHYIVNGQKTWT
TLGQHADMIFCLVRTDPQAKMQEGISFLLIDMKTPGITVRPIIMLDEEHEVNEVFFDNVRVPAENLIGEENRGWTYAKYL
LGHERTGIARVGHSKRELAFLKRVALQHQKNGRPLLEDPVFAAKVASLEIELMALEITVLRVVSSEGVGRGPGPEASLLK
IKGTQIQQMLTELMVEAVGPYAQPFDPDYLEGETPRAVTGDNDAAPLAPYYFNYRKTSIYGGSNEIQRNIISQMILGV

Sequences:

>Translated_398_residues
MDLNYSAADDAFRQEVRGWLEAELPKDIQDKVLNHRRLNRDDFVRWHKALAAKGWSVPHWPVEWGGTGWSPIQKHIWDEE
CARIGAPGVLPFGVSMVAPVIMKYGNEAQKRYYLPRILDCTDWWCQGYSEPGSGSDLASLKTRAVREGDHYIVNGQKTWT
TLGQHADMIFCLVRTDPQAKMQEGISFLLIDMKTPGITVRPIIMLDEEHEVNEVFFDNVRVPAENLIGEENRGWTYAKYL
LGHERTGIARVGHSKRELAFLKRVALQHQKNGRPLLEDPVFAAKVASLEIELMALEITVLRVVSSEGVGRGPGPEASLLK
IKGTQIQQMLTELMVEAVGPYAQPFDPDYLEGETPRAVTGDNDAAPLAPYYFNYRKTSIYGGSNEIQRNIISQMILGV
>Mature_398_residues
MDLNYSAADDAFRQEVRGWLEAELPKDIQDKVLNHRRLNRDDFVRWHKALAAKGWSVPHWPVEWGGTGWSPIQKHIWDEE
CARIGAPGVLPFGVSMVAPVIMKYGNEAQKRYYLPRILDCTDWWCQGYSEPGSGSDLASLKTRAVREGDHYIVNGQKTWT
TLGQHADMIFCLVRTDPQAKMQEGISFLLIDMKTPGITVRPIIMLDEEHEVNEVFFDNVRVPAENLIGEENRGWTYAKYL
LGHERTGIARVGHSKRELAFLKRVALQHQKNGRPLLEDPVFAAKVASLEIELMALEITVLRVVSSEGVGRGPGPEASLLK
IKGTQIQQMLTELMVEAVGPYAQPFDPDYLEGETPRAVTGDNDAAPLAPYYFNYRKTSIYGGSNEIQRNIISQMILGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=340, Percent_Identity=27.9411764705882, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI4557231, Length=343, Percent_Identity=27.6967930029155, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI187960098, Length=343, Percent_Identity=27.6967930029155, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI4501857, Length=402, Percent_Identity=24.8756218905473, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI226958412, Length=229, Percent_Identity=29.2576419213974, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI226958414, Length=180, Percent_Identity=32.2222222222222, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI4557233, Length=344, Percent_Identity=25.8720930232558, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI211971008, Length=308, Percent_Identity=26.9480519480519, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI48976061, Length=308, Percent_Identity=26.9480519480519, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI76496475, Length=212, Percent_Identity=33.9622641509434, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI4557235, Length=212, Percent_Identity=33.9622641509434, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI7656849, Length=358, Percent_Identity=25.9776536312849, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI21361497, Length=291, Percent_Identity=28.1786941580756, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI38505218, Length=310, Percent_Identity=25.1612903225806, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI7669494, Length=238, Percent_Identity=27.7310924369748, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI4503943, Length=238, Percent_Identity=27.7310924369748, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI87081958, Length=356, Percent_Identity=24.7191011235955, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1786223, Length=257, Percent_Identity=26.0700389105058, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17569725, Length=396, Percent_Identity=27.020202020202, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17506239, Length=357, Percent_Identity=27.4509803921569, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17508101, Length=366, Percent_Identity=26.5027322404372, Blast_Score=115, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17570075, Length=409, Percent_Identity=25.1833740831296, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17534899, Length=347, Percent_Identity=27.6657060518732, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=241, Percent_Identity=30.2904564315353, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI32563615, Length=203, Percent_Identity=34.9753694581281, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71990804, Length=193, Percent_Identity=29.5336787564767, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17551932, Length=212, Percent_Identity=29.2452830188679, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI71985184, Length=201, Percent_Identity=31.3432835820896, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=201, Percent_Identity=31.3432835820896, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71982178, Length=228, Percent_Identity=28.5087719298246, Blast_Score=88, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=211, Percent_Identity=28.9099526066351, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17533517, Length=354, Percent_Identity=24.0112994350282, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17534353, Length=265, Percent_Identity=24.9056603773585, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17562446, Length=212, Percent_Identity=26.8867924528302, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24666513, Length=357, Percent_Identity=26.3305322128852, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI21356377, Length=388, Percent_Identity=25.2577319587629, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24660351, Length=354, Percent_Identity=27.683615819209, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI21355753, Length=308, Percent_Identity=29.2207792207792, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI281363737, Length=239, Percent_Identity=29.2887029288703, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24646207, Length=344, Percent_Identity=25, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19920834, Length=295, Percent_Identity=27.1186440677966, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44846; Mature: 44846

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNYSAADDAFRQEVRGWLEAELPKDIQDKVLNHRRLNRDDFVRWHKALAAKGWSVPHW
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
PVEWGGTGWSPIQKHIWDEECARIGAPGVLPFGVSMVAPVIMKYGNEAQKRYYLPRILDC
CCCCCCCCCHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHCC
TDWWCQGYSEPGSGSDLASLKTRAVREGDHYIVNGQKTWTTLGQHADMIFCLVRTDPQAK
CHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCEEEEEEECCCHHH
MQEGISFLLIDMKTPGITVRPIIMLDEEHEVNEVFFDNVRVPAENLIGEENRGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHCCCCCCHHHHCCCCCCCCCHHHHH
LGHERTGIARVGHSKRELAFLKRVALQHQKNGRPLLEDPVFAAKVASLEIELMALEITVL
HCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEEEEEEHHHHH
RVVSSEGVGRGPGPEASLLKIKGTQIQQMLTELMVEAVGPYAQPFDPDYLEGETPRAVTG
HHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC
DNDAAPLAPYYFNYRKTSIYGGSNEIQRNIISQMILGV
CCCCCCCCCCEECCEEEEEECCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLNYSAADDAFRQEVRGWLEAELPKDIQDKVLNHRRLNRDDFVRWHKALAAKGWSVPHW
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
PVEWGGTGWSPIQKHIWDEECARIGAPGVLPFGVSMVAPVIMKYGNEAQKRYYLPRILDC
CCCCCCCCCHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCHHHCC
TDWWCQGYSEPGSGSDLASLKTRAVREGDHYIVNGQKTWTTLGQHADMIFCLVRTDPQAK
CHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCEEEEEEECCCHHH
MQEGISFLLIDMKTPGITVRPIIMLDEEHEVNEVFFDNVRVPAENLIGEENRGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHCCCCCCHHHHCCCCCCCCCHHHHH
LGHERTGIARVGHSKRELAFLKRVALQHQKNGRPLLEDPVFAAKVASLEIELMALEITVL
HCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEEEEEEHHHHH
RVVSSEGVGRGPGPEASLLKIKGTQIQQMLTELMVEAVGPYAQPFDPDYLEGETPRAVTG
HHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC
DNDAAPLAPYYFNYRKTSIYGGSNEIQRNIISQMILGV
CCCCCCCCCCEECCEEEEEECCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]