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The map label for this gene is yggA [C]

Identifier: 17546743

GI number: 17546743

Start: 2201462

End: 2202070

Strand: Reverse

Name: yggA [C]

Synonym: RSc2024

Alternate gene names: 17546743

Gene position: 2202070-2201462 (Counterclockwise)

Preceding gene: 17546744

Following gene: 17546737

Centisome position: 59.25

GC content: 61.25

Gene sequence:

>609_bases
ATGAACGCAGCAACCCAAGGATTGATTCTCGGTTTCTCCCTGATCCTGGCCATCGGATCGCAGAATGCCTTCATCTTGCG
GCAGGGCATCCTGGGCCGGCATGTGTTCGTGCTGTGCTCGGTGTGTGCCCTGTCCGACGCCCTGCTGATCGTGGCGGGCG
TGTCGGGGTTCTTTGTGCTGGTCAAGCACACGCCCTATATCGTGGACGTGGCACGGTATGGCGGCGCGGCGTTCATCCTG
TGGTACGGAATCTCGAGATTGCTGTCCGCGCTGCGCGGCGACAGCCAGATGGACATCTCGAAGGCCAAGGAAGCCGATTC
CCTGCCCAAGGCGCTGCTCAGTTGCCTGGCATTCACCTTTCTCAATCCGCATGTCTATCTCGATACGGTCTTCCTGATCG
GGTCGATTTCGGCGCAGTTCGGCGATGAGTCCTGGAAATTCGGCGTGGGCGCGAGCGCGGCGTCGCTGATTTTCTTCTTC
TGCCTGGGGTACGGCGCGGCGTTGCTGCGTCCGCTGTTCTCGAGCCCCGTGGCCTGGCGGATTCTCGATTTCGTGATCGG
CGTCACCATGCTGATGCTGGCGGGCAAGCTGGCGTTCCTGCAGACCTGA

Upstream 100 bases:

>100_bases
GATATCTGATGGCCGAAGACTACAACTACCGCACCTTGATGCACCGGGCCGATTTCTTCCAGCGCCTCGCCATCGCGCAA
CACGACATGTCCGAAGCAAA

Downstream 100 bases:

>100_bases
GCCGCCGGGGCGCCGGGTAGGAGGAAGGCATGGCGCCGTCCGGCGGTCGCGCGGGCGGCACTCGCTTGCGTGGCCGGGGT
CCAACCGGTCACAGGGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MNAATQGLILGFSLILAIGSQNAFILRQGILGRHVFVLCSVCALSDALLIVAGVSGFFVLVKHTPYIVDVARYGGAAFIL
WYGISRLLSALRGDSQMDISKAKEADSLPKALLSCLAFTFLNPHVYLDTVFLIGSISAQFGDESWKFGVGASAASLIFFF
CLGYGAALLRPLFSSPVAWRILDFVIGVTMLMLAGKLAFLQT

Sequences:

>Translated_202_residues
MNAATQGLILGFSLILAIGSQNAFILRQGILGRHVFVLCSVCALSDALLIVAGVSGFFVLVKHTPYIVDVARYGGAAFIL
WYGISRLLSALRGDSQMDISKAKEADSLPKALLSCLAFTFLNPHVYLDTVFLIGSISAQFGDESWKFGVGASAASLIFFF
CLGYGAALLRPLFSSPVAWRILDFVIGVTMLMLAGKLAFLQT
>Mature_202_residues
MNAATQGLILGFSLILAIGSQNAFILRQGILGRHVFVLCSVCALSDALLIVAGVSGFFVLVKHTPYIVDVARYGGAAFIL
WYGISRLLSALRGDSQMDISKAKEADSLPKALLSCLAFTFLNPHVYLDTVFLIGSISAQFGDESWKFGVGASAASLIFFF
CLGYGAALLRPLFSSPVAWRILDFVIGVTMLMLAGKLAFLQT

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=194, Percent_Identity=37.1134020618557, Blast_Score=120, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21651; Mature: 21651

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAATQGLILGFSLILAIGSQNAFILRQGILGRHVFVLCSVCALSDALLIVAGVSGFFVL
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEE
VKHTPYIVDVARYGGAAFILWYGISRLLSALRGDSQMDISKAKEADSLPKALLSCLAFTF
EECCCCEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LNPHVYLDTVFLIGSISAQFGDESWKFGVGASAASLIFFFCLGYGAALLRPLFSSPVAWR
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ILDFVIGVTMLMLAGKLAFLQT
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNAATQGLILGFSLILAIGSQNAFILRQGILGRHVFVLCSVCALSDALLIVAGVSGFFVL
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEE
VKHTPYIVDVARYGGAAFILWYGISRLLSALRGDSQMDISKAKEADSLPKALLSCLAFTF
EECCCCEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LNPHVYLDTVFLIGSISAQFGDESWKFGVGASAASLIFFFCLGYGAALLRPLFSSPVAWR
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ILDFVIGVTMLMLAGKLAFLQT
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]