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The map label for this gene is 17546738

Identifier: 17546738

GI number: 17546738

Start: 2197582

End: 2198082

Strand: Direct

Name: 17546738

Synonym: RSc2019

Alternate gene names: NA

Gene position: 2197582-2198082 (Clockwise)

Preceding gene: 17546735

Following gene: 17546739

Centisome position: 59.13

GC content: 72.85

Gene sequence:

>501_bases
ATGCTGCGGGCATCCGTGTTTGCCGTCGTGCCCGCCATGACCTCCGCCGCCAACCTGACCGTGCCGACCGTGCCCGCCGG
CTTCGAGACGCTGGTCAAGCCCAGCCCCTTCCTGACGCTGCTGGGGCCGGTGTACGCACGCGGCATCGGCCCGTCGAGGG
TGATGGGTTTTCACGTGGGCCATCATCACCTGAACCGGCGCGGCATCCTGCACGGCGGCGTGGTCGCCTCGCTGGCCGAT
GCGGCGCTCGGCTACTGCCTGGCCGACCCCGCCAGCGGCGACGGCAGGGACGGCGTGCTCGCCATGTCGACGGCGAGCCT
GACGGTCGACTTCATCGCCTCGGCGGGCGCGGGCGACTGGATCGAGATCACCCCGCAGGGCCTGCGCACCGGCAGCAAGC
TGGCCTTCGCGCAGGCCCTGTTCCATCGCGGCGACCGGCTGGTCGCGCGCGCCAGCGCGGTGTTCGCCGTGCTCGGCGCT
CGCGTGGCCGGCCCGGTTTGA

Upstream 100 bases:

>100_bases
TCAAAGACGACGAACAGGTTGAGGTCGACCCGCGAAATATGCACGATATTGATGGATGGCAATCCACGAAATTCATTTCT
CTTATTTTAGGCGAGCGCTT

Downstream 100 bases:

>100_bases
AGCGCATCGATTTTCGGAGGAGACACCATGCATTTCGACTACTCGCCCAAGGTCAAGGAGATGCAGGCCCGCCTGCTCGA
CTTCTTCGACCGGCACATCT

Product: signal peptide protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MLRASVFAVVPAMTSAANLTVPTVPAGFETLVKPSPFLTLLGPVYARGIGPSRVMGFHVGHHHLNRRGILHGGVVASLAD
AALGYCLADPASGDGRDGVLAMSTASLTVDFIASAGAGDWIEITPQGLRTGSKLAFAQALFHRGDRLVARASAVFAVLGA
RVAGPV

Sequences:

>Translated_166_residues
MLRASVFAVVPAMTSAANLTVPTVPAGFETLVKPSPFLTLLGPVYARGIGPSRVMGFHVGHHHLNRRGILHGGVVASLAD
AALGYCLADPASGDGRDGVLAMSTASLTVDFIASAGAGDWIEITPQGLRTGSKLAFAQALFHRGDRLVARASAVFAVLGA
RVAGPV
>Mature_166_residues
MLRASVFAVVPAMTSAANLTVPTVPAGFETLVKPSPFLTLLGPVYARGIGPSRVMGFHVGHHHLNRRGILHGGVVASLAD
AALGYCLADPASGDGRDGVLAMSTASLTVDFIASAGAGDWIEITPQGLRTGSKLAFAQALFHRGDRLVARASAVFAVLGA
RVAGPV

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Drosophila melanogaster, GI21357897, Length=121, Percent_Identity=33.8842975206612, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 16968; Mature: 16968

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRASVFAVVPAMTSAANLTVPTVPAGFETLVKPSPFLTLLGPVYARGIGPSRVMGFHVG
CCCCHHHHHHHHHHCCCCEECCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHEEEEECC
HHHLNRRGILHGGVVASLADAALGYCLADPASGDGRDGVLAMSTASLTVDFIASAGAGDW
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHEEEHHCCCCCCE
IEITPQGLRTGSKLAFAQALFHRGDRLVARASAVFAVLGARVAGPV
EEECHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRASVFAVVPAMTSAANLTVPTVPAGFETLVKPSPFLTLLGPVYARGIGPSRVMGFHVG
CCCCHHHHHHHHHHCCCCEECCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHEEEEECC
HHHLNRRGILHGGVVASLADAALGYCLADPASGDGRDGVLAMSTASLTVDFIASAGAGDW
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHEEEHHCCCCCCE
IEITPQGLRTGSKLAFAQALFHRGDRLVARASAVFAVLGARVAGPV
EEECHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]