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The map label for this gene is yaaA [C]

Identifier: 17546728

GI number: 17546728

Start: 2188431

End: 2189204

Strand: Reverse

Name: yaaA [C]

Synonym: RSc2009

Alternate gene names: 17546728

Gene position: 2189204-2188431 (Counterclockwise)

Preceding gene: 17546731

Following gene: 17546727

Centisome position: 58.91

GC content: 66.15

Gene sequence:

>774_bases
ATGATCATCGTCCTCTCGCCGGCCAAGTCGCTGGACTACGATACACCGCCGCGCATCAAGACCCACACGCTGCCCGATTT
CATCGAGCGCTCCGCTGTCCTGATCGAAACGCTGCGCAAGCTTTCCCCGGCCCAGATCGGCACGCTGATGCACATCTCCG
ACCCGCTGGCGGTGCTCAACGCCAACCGCTACGCCGACTGGTCCACCGAGTTCACCGCCGACAACAGCAAGCAGGCCGTG
CTCGCCTTCGACGGCGATGTCTACGGCGGGCTCGATGCCAACACGCTGTCGGCCGACGATCTGCAGTTCGCGCAGCAGCA
TCTGCGGATCCTGTCGGGCCTGTACGGCGTGCTGCGCCCGCTCGACCGGATGCAGCCGTACCGGCTCGAGATGGGCACGC
GCCTGGCCAATCCGGGCGGCAAGGATCTCTACGCGTTCTGGGGCGACGACGTCACGCTCGCGCTCAACGCGCTGCTCCAG
GCGGACGACGACCCGGTCCTGGTCAACCTGGCCTCCGAGGAGTACTTCAAGGTGGTGCGGCCCAAGGTGCTGAAGGCGCG
CATCGTCACGCCCGTCTTCGAAGACTGGAAGGGCGGCCGGTACAAGATCATCTCGTTCTATGCCAAGCGGGCGCGCGGGC
TGATGGCGCGCTATGCGATCGAGCACCGCATCGCCGATCCGCGCAAGCTCAAGCACTTCGACGCGGAAGGCTACGCGTTT
GCCGCCGAAGCCTCCGACGATGAGCGCTGGGTCTTCCGCCGCAAGGCCGCCTGA

Upstream 100 bases:

>100_bases
CAGGTCGACCCAGATATTCGAGTCGAGGACCACCCGCGGGACGGGGGCGGCGGTGTCGGCCATTCGATACAATCCAAGAC
TTGTGAACCGCGATTCTGAC

Downstream 100 bases:

>100_bases
TTTCTCCCGCATCGCGCACCACAGGATTGCCCATGACCGCCACCCAGCCGTATCTCTCCAGCACGTTCGACAGCGGCGCC
ATCGAGATCGTCGATGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MIIVLSPAKSLDYDTPPRIKTHTLPDFIERSAVLIETLRKLSPAQIGTLMHISDPLAVLNANRYADWSTEFTADNSKQAV
LAFDGDVYGGLDANTLSADDLQFAQQHLRILSGLYGVLRPLDRMQPYRLEMGTRLANPGGKDLYAFWGDDVTLALNALLQ
ADDDPVLVNLASEEYFKVVRPKVLKARIVTPVFEDWKGGRYKIISFYAKRARGLMARYAIEHRIADPRKLKHFDAEGYAF
AAEASDDERWVFRRKAA

Sequences:

>Translated_257_residues
MIIVLSPAKSLDYDTPPRIKTHTLPDFIERSAVLIETLRKLSPAQIGTLMHISDPLAVLNANRYADWSTEFTADNSKQAV
LAFDGDVYGGLDANTLSADDLQFAQQHLRILSGLYGVLRPLDRMQPYRLEMGTRLANPGGKDLYAFWGDDVTLALNALLQ
ADDDPVLVNLASEEYFKVVRPKVLKARIVTPVFEDWKGGRYKIISFYAKRARGLMARYAIEHRIADPRKLKHFDAEGYAF
AAEASDDERWVFRRKAA
>Mature_257_residues
MIIVLSPAKSLDYDTPPRIKTHTLPDFIERSAVLIETLRKLSPAQIGTLMHISDPLAVLNANRYADWSTEFTADNSKQAV
LAFDGDVYGGLDANTLSADDLQFAQQHLRILSGLYGVLRPLDRMQPYRLEMGTRLANPGGKDLYAFWGDDVTLALNALLQ
ADDDPVLVNLASEEYFKVVRPKVLKARIVTPVFEDWKGGRYKIISFYAKRARGLMARYAIEHRIADPRKLKHFDAEGYAF
AAEASDDERWVFRRKAA

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=254, Percent_Identity=58.6614173228346, Blast_Score=310, Evalue=5e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2009_RALSO (Q8XXV4)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_520130.1
- GeneID:   1220849
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc2009
- NMPDR:   fig|267608.1.peg.2009
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- ProtClustDB:   PRK02101
- BioCyc:   RSOL267608:RSC2009-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 28974; Mature: 28974

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIVLSPAKSLDYDTPPRIKTHTLPDFIERSAVLIETLRKLSPAQIGTLMHISDPLAVLN
CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCEEEECCCCHHEEE
ANRYADWSTEFTADNSKQAVLAFDGDVYGGLDANTLSADDLQFAQQHLRILSGLYGVLRP
CCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LDRMQPYRLEMGTRLANPGGKDLYAFWGDDVTLALNALLQADDDPVLVNLASEEYFKVVR
HHHCCCCEEHHCCEECCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHH
PKVLKARIVTPVFEDWKGGRYKIISFYAKRARGLMARYAIEHRIADPRKLKHFDAEGYAF
HHHHHHHHCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEE
AAEASDDERWVFRRKAA
EECCCCCCHHHEEECCC
>Mature Secondary Structure
MIIVLSPAKSLDYDTPPRIKTHTLPDFIERSAVLIETLRKLSPAQIGTLMHISDPLAVLN
CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCEEEECCCCHHEEE
ANRYADWSTEFTADNSKQAVLAFDGDVYGGLDANTLSADDLQFAQQHLRILSGLYGVLRP
CCCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LDRMQPYRLEMGTRLANPGGKDLYAFWGDDVTLALNALLQADDDPVLVNLASEEYFKVVR
HHHCCCCEEHHCCEECCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHH
PKVLKARIVTPVFEDWKGGRYKIISFYAKRARGLMARYAIEHRIADPRKLKHFDAEGYAF
HHHHHHHHCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEE
AAEASDDERWVFRRKAA
EECCCCCCHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852