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The map label for this gene is ygfY [C]

Identifier: 17546711

GI number: 17546711

Start: 2169743

End: 2170030

Strand: Reverse

Name: ygfY [C]

Synonym: RSc1992

Alternate gene names: 17546711

Gene position: 2170030-2169743 (Counterclockwise)

Preceding gene: 17546712

Following gene: 17546710

Centisome position: 58.39

GC content: 63.54

Gene sequence:

>288_bases
ATGACCGCCGTGAACACTTCGACGTTTTCCCACCAGTCCGATCCGCACAGGCGCGCGCGCCTGCGCTGGCGTGCCCGACG
CGGCCTGCTGGAGAACGACATCATCGTCGAGCGTTTTTTCAACCGCTACGAGACCGAGCTGTCCGATGACGACGTCGGCG
CGCTCACGCAGTTGTTCGAGTTGCCGGACAACGATCTGATGGATCTCCTGCTGGCCCGCAAGGAGCCCGAAGGAGCGCTC
GACGTGCCTTCCGTTCGGCATGTGCTGAGCTTGTTGCGCGCCGTCTAG

Upstream 100 bases:

>100_bases
GGCCATCGGCAAGATCAAGGAACTGATGGTGCGCCGCGCGGTGTAAGCCGCCAGCCCAGCGTCGCCGGAGCGATTGTTCC
GGCGACGCACTTTGTAGAGC

Downstream 100 bases:

>100_bases
GCGTGCTGCGAGAGGTTGCCGCAAGGCGAATCGCTCTGGCCCCCGGTTTTGTGCGATCCGTCTAGCGGGAGACTCCCGAG
TCCATTTTTATAAACAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MTAVNTSTFSHQSDPHRRARLRWRARRGLLENDIIVERFFNRYETELSDDDVGALTQLFELPDNDLMDLLLARKEPEGAL
DVPSVRHVLSLLRAV

Sequences:

>Translated_95_residues
MTAVNTSTFSHQSDPHRRARLRWRARRGLLENDIIVERFFNRYETELSDDDVGALTQLFELPDNDLMDLLLARKEPEGAL
DVPSVRHVLSLLRAV
>Mature_94_residues
TAVNTSTFSHQSDPHRRARLRWRARRGLLENDIIVERFFNRYETELSDDDVGALTQLFELPDNDLMDLLLARKEPEGALD
VPSVRHVLSLLRAV

Specific function: Unknown

COG id: COG2938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0350 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1992_RALSO (Q8XXX1)

Other databases:

- EMBL:   AL646052
- RefSeq:   NP_520113.1
- ProteinModelPortal:   Q8XXX1
- SMR:   Q8XXX1
- GeneID:   1220832
- GenomeReviews:   AL646052_GR
- KEGG:   rso:RSc1992
- NMPDR:   fig|267608.1.peg.1992
- HOGENOM:   HBG730588
- OMA:   KRARLRW
- ProtClustDB:   CLSK2753671
- BioCyc:   RSOL267608:RSC1992-MONOMER
- InterPro:   IPR005631
- Gene3D:   G3DSA:1.10.150.250

Pfam domain/function: PF03937 DUF339; SSF109910 DUF339

EC number: NA

Molecular weight: Translated: 10988; Mature: 10856

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVNTSTFSHQSDPHRRARLRWRARRGLLENDIIVERFFNRYETELSDDDVGALTQLFE
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LPDNDLMDLLLARKEPEGALDVPSVRHVLSLLRAV
CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure 
TAVNTSTFSHQSDPHRRARLRWRARRGLLENDIIVERFFNRYETELSDDDVGALTQLFE
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LPDNDLMDLLLARKEPEGALDVPSVRHVLSLLRAV
CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852