| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is yetK [H]
Identifier: 17546672
GI number: 17546672
Start: 2131443
End: 2132453
Strand: Direct
Name: yetK [H]
Synonym: RSc1953
Alternate gene names: 17546672
Gene position: 2131443-2132453 (Clockwise)
Preceding gene: 17546669
Following gene: 17546673
Centisome position: 57.35
GC content: 71.12
Gene sequence:
>1011_bases ATGGCTGCCCGGCAAGCCGCGTCCGGCGCCGCTCTTCGTCGATCTTCCATCGTGCCCATCCACGCCCTCTTCCTCATTGC CGCCATGGCCCTGGTCGGCAGCAACGTCGGCTTCGGCAAATCCATCGTCGCCGTGATGCCGGTGATGCTGTTCGCCCTGC TGCGCTTCGTGATCGCCGTCGCCTGCATGGCGCCGTGGTACCGGCCATCGCGCATGCGGCGCGTGACGCGCGGCGAGTGG ACCAACCTGTTCCTGCAGGCGCTCTTCGGCACCTTCGGCTTCACGCTGCTGATGCTCAATGGCGTGCGGCTGACCTCGGC GCTGGCCGCCGGCATCATCACCAGCACCATCCCGGCGACGGTCGCGCTGCTGTCGTGGCTGGTGCTGCGCGAGAAGCCCT CGGGGCGCACGCTGGTATCGGTGACGCTGGCGGTGGCAGGCGTGGCGCTGCTCAACGCCGATCGCGGCGGCGAATTCGCG GGCGCTGCCCCGGCCGATGCGGCCCGGGCCCTGCTGGGCAACGCGCTGGTGATGGGCGCGGTGCTGTGCGAATCGGTCTA CGTGGTCCTGTCGCGCCGGCTGACGCAAACGTTGCCGGCCATCGAGATCTGCGCCTATACCCACCTGATCGGCGCGCTGC TGATGCTGCCGCTGGGGCTGGCGCCGCTGCTCACCTTCGACCTGTCGTCGGTGCCGCCGCACATCTGGGGCCTGGTGGTG TGGTATGCGCTGTCGGCCAGCCTCTTCTCGTTCTGGCTGTGGATGAAAGGCATCCGGCACGTGCCGGCGCATCTGGCCGG CGTGTTCACCTCGGTGCTGCCGATCGCGGCCGCCGCCTACGGCATCATCGCGCTGGGCGAGGCGCCGGGCTGGGCGCACG GCGCGGCGCTGGCCTGCGTGGTGGCTGGGATCCTGGTGGCGAGCTGGCCGGCCCGGCCGCGCCGGACGGTGCCGCGCGGG CGCATGCCCGATCCGCTGGACCCGCTCGACCCGTCGCTGGACCACGACTGA
Upstream 100 bases:
>100_bases AGCCTTACGCAAGCGCGACGTGCGCCGGCCGCCGCAGTGTGTCATGCAACGCATCACTATAATGCGTCACCCGCGTCCGC CGCACTCACCGCAGTGCAGC
Downstream 100 bases:
>100_bases CCATCGGCCCCGCCACAACCTCAGCCGCCCGACAGGCGCGCAACGTTAGAATCACGCGGTTTTCCCGTCCTATCCTTCCG AGCATGAAGTCGCCCATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MAARQAASGAALRRSSIVPIHALFLIAAMALVGSNVGFGKSIVAVMPVMLFALLRFVIAVACMAPWYRPSRMRRVTRGEW TNLFLQALFGTFGFTLLMLNGVRLTSALAAGIITSTIPATVALLSWLVLREKPSGRTLVSVTLAVAGVALLNADRGGEFA GAAPADAARALLGNALVMGAVLCESVYVVLSRRLTQTLPAIEICAYTHLIGALLMLPLGLAPLLTFDLSSVPPHIWGLVV WYALSASLFSFWLWMKGIRHVPAHLAGVFTSVLPIAAAAYGIIALGEAPGWAHGAALACVVAGILVASWPARPRRTVPRG RMPDPLDPLDPSLDHD
Sequences:
>Translated_336_residues MAARQAASGAALRRSSIVPIHALFLIAAMALVGSNVGFGKSIVAVMPVMLFALLRFVIAVACMAPWYRPSRMRRVTRGEW TNLFLQALFGTFGFTLLMLNGVRLTSALAAGIITSTIPATVALLSWLVLREKPSGRTLVSVTLAVAGVALLNADRGGEFA GAAPADAARALLGNALVMGAVLCESVYVVLSRRLTQTLPAIEICAYTHLIGALLMLPLGLAPLLTFDLSSVPPHIWGLVV WYALSASLFSFWLWMKGIRHVPAHLAGVFTSVLPIAAAAYGIIALGEAPGWAHGAALACVVAGILVASWPARPRRTVPRG RMPDPLDPLDPSLDHD >Mature_335_residues AARQAASGAALRRSSIVPIHALFLIAAMALVGSNVGFGKSIVAVMPVMLFALLRFVIAVACMAPWYRPSRMRRVTRGEWT NLFLQALFGTFGFTLLMLNGVRLTSALAAGIITSTIPATVALLSWLVLREKPSGRTLVSVTLAVAGVALLNADRGGEFAG AAPADAARALLGNALVMGAVLCESVYVVLSRRLTQTLPAIEICAYTHLIGALLMLPLGLAPLLTFDLSSVPPHIWGLVVW YALSASLFSFWLWMKGIRHVPAHLAGVFTSVLPIAAAAYGIIALGEAPGWAHGAALACVVAGILVASWPARPRRTVPRGR MPDPLDPLDPSLDHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 35511; Mature: 35380
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARQAASGAALRRSSIVPIHALFLIAAMALVGSNVGFGKSIVAVMPVMLFALLRFVIAV CCCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH ACMAPWYRPSRMRRVTRGEWTNLFLQALFGTFGFTLLMLNGVRLTSALAAGIITSTIPAT HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VALLSWLVLREKPSGRTLVSVTLAVAGVALLNADRGGEFAGAAPADAARALLGNALVMGA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VLCESVYVVLSRRLTQTLPAIEICAYTHLIGALLMLPLGLAPLLTFDLSSVPPHIWGLVV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH WYALSASLFSFWLWMKGIRHVPAHLAGVFTSVLPIAAAAYGIIALGEAPGWAHGAALACV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHH VAGILVASWPARPRRTVPRGRMPDPLDPLDPSLDHD HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AARQAASGAALRRSSIVPIHALFLIAAMALVGSNVGFGKSIVAVMPVMLFALLRFVIAV CCCHHHCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH ACMAPWYRPSRMRRVTRGEWTNLFLQALFGTFGFTLLMLNGVRLTSALAAGIITSTIPAT HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VALLSWLVLREKPSGRTLVSVTLAVAGVALLNADRGGEFAGAAPADAARALLGNALVMGA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VLCESVYVVLSRRLTQTLPAIEICAYTHLIGALLMLPLGLAPLLTFDLSSVPPHIWGLVV HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH WYALSASLFSFWLWMKGIRHVPAHLAGVFTSVLPIAAAAYGIIALGEAPGWAHGAALACV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHH VAGILVASWPARPRRTVPRGRMPDPLDPLDPSLDHD HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]