| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17546648
Identifier: 17546648
GI number: 17546648
Start: 2106697
End: 2107131
Strand: Reverse
Name: 17546648
Synonym: RSc1929
Alternate gene names: NA
Gene position: 2107131-2106697 (Counterclockwise)
Preceding gene: 17546649
Following gene: 17546647
Centisome position: 56.7
GC content: 66.21
Gene sequence:
>435_bases ATGATGAAGCCCGCTAGCCTGCGCGATGCGCTCACGGCCGGCGTGCCGCACCTGGCCGCCAACCCGGACGCGCTGCATGT GTTCGTGGACGAGGGGAACGTGGTTGGCACCGGCGCGCGGTCGTTGTCCTTCGAGTATCGGTACACGTTGACGCTGATCG TGACCGACTACCCGGACAGCTCGGACACCATCGTCGTCCCGGTCCTGGCCTGGTTGCGGACGAACCAACCCGACCTGTTC GCCAACGACGAGCGGCGCCACGACGGGTTCCGCTTCGAGGCTGAAATCCTGAACCACTGCACGGTCGACCTGTCGATCAA GCTGCAATTGACCGAGCGCGTAACCGTGAAGCCGGCCGGCGGCGGCTACCAGGTCGAGCACCACCCGGAGCCGGTCAACG ATGCCGACGACCCGGCGAGCTGGAGGCCGAATTGA
Upstream 100 bases:
>100_bases ACAACTACACCGATAGCCACGCCAACAGCGAGCAGCTAGCGCGCCTGCAGCAGCTGTTGCGCGACCAGGGCGCGACCATC ATCGGGGAGGGTGGTGCGCC
Downstream 100 bases:
>100_bases GCGAGCCCCGCGAACTAGAGGTATGGCTGGCCGGGATGCTGACCAAGCTGGATGCACCGGCCCGCCGGACGCTGGCGCGC GCCGTGGCCGTCGAGCTGCG
Product: tail completion-like protein
Products: NA
Alternate protein names: Tail Completion Protein R; P2 Phage Tail Completion Protein R; Phage Tail Completion Protein R; Phage Tail Protein; Bacteriophage Tail Completion Protein R; Bacteriophage P2 Tail Completion Protein GPR; Phage-Related Tail Completion Protein; Tail Completion Protein; Bacteriophage Tail Completion Protein GpR-Like Protein; Phage-Related Tail Protein; P2 Phage Tail Completion Protein R GpR; Prophage Tail Completion Protein; Tail Completion-Like Protein; Bacteriophage Tail Completion-Like Protein; Phage Tail Completion Protein GpR; Phage Tail Completion R Family Protein; Bacteriophage P2 Tail Completion Protein GpR
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MMKPASLRDALTAGVPHLAANPDALHVFVDEGNVVGTGARSLSFEYRYTLTLIVTDYPDSSDTIVVPVLAWLRTNQPDLF ANDERRHDGFRFEAEILNHCTVDLSIKLQLTERVTVKPAGGGYQVEHHPEPVNDADDPASWRPN
Sequences:
>Translated_144_residues MMKPASLRDALTAGVPHLAANPDALHVFVDEGNVVGTGARSLSFEYRYTLTLIVTDYPDSSDTIVVPVLAWLRTNQPDLF ANDERRHDGFRFEAEILNHCTVDLSIKLQLTERVTVKPAGGGYQVEHHPEPVNDADDPASWRPN >Mature_144_residues MMKPASLRDALTAGVPHLAANPDALHVFVDEGNVVGTGARSLSFEYRYTLTLIVTDYPDSSDTIVVPVLAWLRTNQPDLF ANDERRHDGFRFEAEILNHCTVDLSIKLQLTERVTVKPAGGGYQVEHHPEPVNDADDPASWRPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15964; Mature: 15964
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKPASLRDALTAGVPHLAANPDALHVFVDEGNVVGTGARSLSFEYRYTLTLIVTDYPDS CCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCEEECCCCEEEEEEEEEEEEEEEECCCC SDTIVVPVLAWLRTNQPDLFANDERRHDGFRFEAEILNHCTVDLSIKLQLTERVTVKPAG CCCEEEEEHHHHHCCCCCEEECCCCCCCCEEEEEEECCCEEEEEEEEEEEEEEEEEEECC GGYQVEHHPEPVNDADDPASWRPN CCEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMKPASLRDALTAGVPHLAANPDALHVFVDEGNVVGTGARSLSFEYRYTLTLIVTDYPDS CCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCEEECCCCEEEEEEEEEEEEEEEECCCC SDTIVVPVLAWLRTNQPDLFANDERRHDGFRFEAEILNHCTVDLSIKLQLTERVTVKPAG CCCEEEEEHHHHHCCCCCEEECCCCCCCCEEEEEEECCCEEEEEEEEEEEEEEEEEEECC GGYQVEHHPEPVNDADDPASWRPN CCEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA