| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546647
Identifier: 17546647
GI number: 17546647
Start: 2106254
End: 2106700
Strand: Reverse
Name: 17546647
Synonym: RSc1928
Alternate gene names: NA
Gene position: 2106700-2106254 (Counterclockwise)
Preceding gene: 17546648
Following gene: 17546644
Centisome position: 56.69
GC content: 69.57
Gene sequence:
>447_bases TTGAGCGAGCCCCGCGAACTAGAGGTATGGCTGGCCGGGATGCTGACCAAGCTGGATGCACCGGCCCGCCGGACGCTGGC GCGCGCCGTGGCCGTCGAGCTGCGCCGGCGCCAGGCTACCCGCATCGCCGAGCAGCGCAACCCGGACGGCAGTCCCTACG TGCCGCGCAAGCCGCAACTGGGGCACCGCGCCGGCCGCATCCGTCGCGCCATGTTCGCGCGCCTGCGGCTCGCGCGCTAC ATGAAGACCGAGGCCGATGCGAATACCTCCGTGGTGACCTTCGCGGGCACCGCGCAGCGCATCGCCAGGGTTCACCAGTT CGGCCTGCGGGATCGCGTCAACAAGGCTGGACTGACCGCCCAATATCCGGCGCGGGAGCTGCTGGGACTGGACGATGGCG ATGTCCATCGCATTACCGACCTCGTGCTGCAGCACCTATCAGGCTAG
Upstream 100 bases:
>100_bases CCGAGCGCGTAACCGTGAAGCCGGCCGGCGGCGGCTACCAGGTCGAGCACCACCCGGAGCCGGTCAACGATGCCGACGAC CCGGCGAGCTGGAGGCCGAA
Downstream 100 bases:
>100_bases TCCTGGCAACACGAAGATGGTTCAGAGCCAACCAAAATCCTTCCGTACCTGTGAAGCCAATTGGTTTGCGTAGTAGAGCG GGTCGCTACCAGGATGATAA
Product: tail completion-like protein
Products: NA
Alternate protein names: Phage Tail Protein; Tail Completion Protein S; Phage-Related Tail Protein; Phage Tail Completion Protein; Prophage Tail Completion Protein; Phage-Related Tail Completion Protein; P2 Phage Tail Completion Protein R; Phage Virion Morphogenesis Family; Bacteriophage P2 Tail Completion Protein GPS; Tail Completion-Like Protein; Phage P2 Essential Tail Completion GpS-Like Protein
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSEPRELEVWLAGMLTKLDAPARRTLARAVAVELRRRQATRIAEQRNPDGSPYVPRKPQLGHRAGRIRRAMFARLRLARY MKTEADANTSVVTFAGTAQRIARVHQFGLRDRVNKAGLTAQYPARELLGLDDGDVHRITDLVLQHLSG
Sequences:
>Translated_148_residues MSEPRELEVWLAGMLTKLDAPARRTLARAVAVELRRRQATRIAEQRNPDGSPYVPRKPQLGHRAGRIRRAMFARLRLARY MKTEADANTSVVTFAGTAQRIARVHQFGLRDRVNKAGLTAQYPARELLGLDDGDVHRITDLVLQHLSG >Mature_147_residues SEPRELEVWLAGMLTKLDAPARRTLARAVAVELRRRQATRIAEQRNPDGSPYVPRKPQLGHRAGRIRRAMFARLRLARYM KTEADANTSVVTFAGTAQRIARVHQFGLRDRVNKAGLTAQYPARELLGLDDGDVHRITDLVLQHLSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16676; Mature: 16544
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPRELEVWLAGMLTKLDAPARRTLARAVAVELRRRQATRIAEQRNPDGSPYVPRKPQL CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GHRAGRIRRAMFARLRLARYMKTEADANTSVVTFAGTAQRIARVHQFGLRDRVNKAGLTA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCC QYPARELLGLDDGDVHRITDLVLQHLSG CCCHHHHCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SEPRELEVWLAGMLTKLDAPARRTLARAVAVELRRRQATRIAEQRNPDGSPYVPRKPQL CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GHRAGRIRRAMFARLRLARYMKTEADANTSVVTFAGTAQRIARVHQFGLRDRVNKAGLTA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCC QYPARELLGLDDGDVHRITDLVLQHLSG CCCHHHHCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA