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The map label for this gene is 17546570

Identifier: 17546570

GI number: 17546570

Start: 2033472

End: 2033939

Strand: Direct

Name: 17546570

Synonym: RSc1851

Alternate gene names: NA

Gene position: 2033472-2033939 (Clockwise)

Preceding gene: 17546568

Following gene: 17546575

Centisome position: 54.72

GC content: 64.1

Gene sequence:

>468_bases
ATGAAACCCCTTAAGCACACCCCGGCAGGCGCCGCCCTGAGCGGCCTTATCCTTGACCTGTTCAGACTCAACAGCCAGGT
GCTCACGGCGGGCGACCGACTGGTGGCCGACCTGGGCCTGACCAGTGCCCGCTGGCAGATCCTCGGCACCGTCAACGCGG
TAGATCGGCCGCAGCCTGTCGCCTGGCTGGCCCGCGACATGGGGGCCAACCGCCAGAACGTTCAGCGTATCGTCAACGAC
CTGGAGAAAGAGGGTCTGGTCGCCTTCGAGGCCAATCCGCACCACAAGCGTGCGCAGCTCGTCGTCATGACCGAGAAGGG
AAAACAGGCTTACGGGGCGGCCATGCAGTTGCAGACGCCCTGGATCAATGGGCTGGCGAAAGGTCTTGCCGTCGAGGACA
TCAAGACGATGCACAAGGTCATCGCGGCCCTGCGCGTGAAACTCGACGAGGATGGGGACGCGGACTGA

Upstream 100 bases:

>100_bases
GGCGTGCATGAGGCGCTCCTTGGTGGGATGGGTGAAGGAAGGGTATGATTGACATGGATCATATTGACATTATGATGTCA
ATTGTACAACACGATGACGA

Downstream 100 bases:

>100_bases
CTACAGCGCCTTCGGCTCCGTGGCCATCAAGACATCCGGCATGGCCCGTGACTGCCAGTCGAAGTCCGGATTGAAGGTCC
GCCGCGCATGGGCCCTGCCC

Product: transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKPLKHTPAGAALSGLILDLFRLNSQVLTAGDRLVADLGLTSARWQILGTVNAVDRPQPVAWLARDMGANRQNVQRIVND
LEKEGLVAFEANPHHKRAQLVVMTEKGKQAYGAAMQLQTPWINGLAKGLAVEDIKTMHKVIAALRVKLDEDGDAD

Sequences:

>Translated_155_residues
MKPLKHTPAGAALSGLILDLFRLNSQVLTAGDRLVADLGLTSARWQILGTVNAVDRPQPVAWLARDMGANRQNVQRIVND
LEKEGLVAFEANPHHKRAQLVVMTEKGKQAYGAAMQLQTPWINGLAKGLAVEDIKTMHKVIAALRVKLDEDGDAD
>Mature_155_residues
MKPLKHTPAGAALSGLILDLFRLNSQVLTAGDRLVADLGLTSARWQILGTVNAVDRPQPVAWLARDMGANRQNVQRIVND
LEKEGLVAFEANPHHKRAQLVVMTEKGKQAYGAAMQLQTPWINGLAKGLAVEDIKTMHKVIAALRVKLDEDGDAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16879; Mature: 16879

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLKHTPAGAALSGLILDLFRLNSQVLTAGDRLVADLGLTSARWQILGTVNAVDRPQPV
CCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCHHEEEEEECCCCCCCCHH
AWLARDMGANRQNVQRIVNDLEKEGLVAFEANPHHKRAQLVVMTEKGKQAYGAAMQLQTP
HHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCHHCCEEEECCC
WINGLAKGLAVEDIKTMHKVIAALRVKLDEDGDAD
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKPLKHTPAGAALSGLILDLFRLNSQVLTAGDRLVADLGLTSARWQILGTVNAVDRPQPV
CCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHHHHCCCCCHHEEEEEECCCCCCCCHH
AWLARDMGANRQNVQRIVNDLEKEGLVAFEANPHHKRAQLVVMTEKGKQAYGAAMQLQTP
HHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCHHCCEEEECCC
WINGLAKGLAVEDIKTMHKVIAALRVKLDEDGDAD
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]