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The map label for this gene is 17546568

Identifier: 17546568

GI number: 17546568

Start: 2032082

End: 2032555

Strand: Direct

Name: 17546568

Synonym: RSc1849

Alternate gene names: NA

Gene position: 2032082-2032555 (Clockwise)

Preceding gene: 17546560

Following gene: 17546570

Centisome position: 54.68

GC content: 63.5

Gene sequence:

>474_bases
ATGAAAGCTCAGGAAAGAACACCCGCCGGCGCAGCCTTGGGCACCTCGGCGCTGTACTTGTTCAAGGTGGCCAGCGGCAT
GCTCACCGAGGGCGACCGGCTGGTCGCAGACCTGGGCCTGAGCAGTTCACGCTGGCAGGTGCTCGGCACCATCGTGGCAG
CAGAAAGACCGCAGCCCGTGGCTTGGCTGGCCAGAGACATGGGCGCGAACCGTCAGAATGTTCAGCGCATCGTCCACGAC
CTGGCCCGGGACGGGTTCGTGGAATTCGCCAACAACCCCCATCACCGGCGGGCTCCGCTGGTTATGCTGACTGCCAGCGG
TCAAAACGTTCACAACCGGGCCGTGAACCTGGGGGCGCCATGGATGAACGAGCTGGCCCGCGGAATTCCCCCCGAGGACA
TCGAGATCATGCGCCGGGTGTTGATGGCCCTTCAAACCAAACTGGAAAAGGGCGTTCCTGCACAGCAAGCCTAG

Upstream 100 bases:

>100_bases
CTGAGATATGGTTCGCATTTGAATGATTTATTGTGTCAATTTGACAATCAAATGTCAATTGGTCATGATTGTCCGCTATC
TTGCAAGCAGATAGGGATAG

Downstream 100 bases:

>100_bases
TTGCGGATCGCTTGATCGAGCGCAGGGTTGGGCTTCAAGCCTTCGACGGCCCCTGGCGCCCTTCCCGCATGGCTTGGGCG
GCCGTCTCGAAGGCTTCCAC

Product: transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKAQERTPAGAALGTSALYLFKVASGMLTEGDRLVADLGLSSSRWQVLGTIVAAERPQPVAWLARDMGANRQNVQRIVHD
LARDGFVEFANNPHHRRAPLVMLTASGQNVHNRAVNLGAPWMNELARGIPPEDIEIMRRVLMALQTKLEKGVPAQQA

Sequences:

>Translated_157_residues
MKAQERTPAGAALGTSALYLFKVASGMLTEGDRLVADLGLSSSRWQVLGTIVAAERPQPVAWLARDMGANRQNVQRIVHD
LARDGFVEFANNPHHRRAPLVMLTASGQNVHNRAVNLGAPWMNELARGIPPEDIEIMRRVLMALQTKLEKGVPAQQA
>Mature_157_residues
MKAQERTPAGAALGTSALYLFKVASGMLTEGDRLVADLGLSSSRWQVLGTIVAAERPQPVAWLARDMGANRQNVQRIVHD
LARDGFVEFANNPHHRRAPLVMLTASGQNVHNRAVNLGAPWMNELARGIPPEDIEIMRRVLMALQTKLEKGVPAQQA

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17167; Mature: 17167

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAQERTPAGAALGTSALYLFKVASGMLTEGDRLVADLGLSSSRWQVLGTIVAAERPQPV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCH
AWLARDMGANRQNVQRIVHDLARDGFVEFANNPHHRRAPLVMLTASGQNVHNRAVNLGAP
HHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCCCHHHHHEECCCH
WMNELARGIPPEDIEIMRRVLMALQTKLEKGVPAQQA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKAQERTPAGAALGTSALYLFKVASGMLTEGDRLVADLGLSSSRWQVLGTIVAAERPQPV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCH
AWLARDMGANRQNVQRIVHDLARDGFVEFANNPHHRRAPLVMLTASGQNVHNRAVNLGAP
HHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCCCHHHHHEECCCH
WMNELARGIPPEDIEIMRRVLMALQTKLEKGVPAQQA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]