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The map label for this gene is 17546566

Identifier: 17546566

GI number: 17546566

Start: 2029858

End: 2031096

Strand: Reverse

Name: 17546566

Synonym: RSc1847

Alternate gene names: NA

Gene position: 2031096-2029858 (Counterclockwise)

Preceding gene: 17546567

Following gene: 17546565

Centisome position: 54.65

GC content: 61.5

Gene sequence:

>1239_bases
ATGGTTCTTCAGGTCCAGCACCCATCCATTCCGAAGCGTCTACATGGCGCAGTTCTGGTGGACGGCTGCGGCTTGCCTCG
GTACTGGGTCAGCGTCTGGGCGCAGCTCGCGTTGGCGGATCTGGCCGAATTGACGCGCTTGCGCAAGCTGTACGCGATTG
AGCGCTTGTACGCGTATGCCGATGAGTTGTTGGGCGCTGGAGCGTTGGATGATGCGCTGTTCAGCCTGGACGAGGCCCGC
TTAGGCTCCATCCTTGAGGGCTGGTTCGTGTCGATCCGCAATCAGCATCAGATCACAGATTCGGACCAGAAGCGCTGGCG
CGCGGGGCTGGACTTCGTTGTGGCGGTGACAACCTGGTTGGGCCAAGGAACGCGGCATGAAAACCGGTTAGCTCGTCTTG
ATGCACGTTGGCAGCGCCTGAACCTGCTGTATGGCCAACTGCAGATTCAACGTCCTCATCGCACCAACATTCTGCGTGCG
TTGCCGGCCGTGGTCGTCGAAGCGATGTACGCGCTTCTGGATCCCGAGTCCGACACGAACCCCTTCAAGGGCGTGCGCAC
GCGCTGGCGTGTCTTTACCGCGTTCGTGCTGATGTTGCACCAGGGATTGCGCCGCGGGGAATTGCTGCTCCTGAACGCGA
ATGCCATCAAGTCCGGCTTGGATGCGCGGCAGCAGCGCCGGCGCTACTGGATCAATGTCAGCGAACAAGGCCGCGTTGAC
ACCGACCCCCGCTACTCAAAGCCGGGCATCAAGACCGCTGATTCGATCCGGCAGGTTCCTGTCAGCGAGTTGACAGCGAA
CCTGGTGCAGTGCTACGTCGACAATTACCGCGGACGGCCCGATCACCCCTATCTGCTGAATGCGCAGACCAATACCCCGC
TGTCGACGGAATCGCTGACCAAGCTCTTTGAGCGCATCTCCACGGCCCTGCCGGCCGCCGTGCTGGCGGAATTGGAGGAC
CGGACCGGCAAGACGAGCATCACGCCGCATGACCTGCGCCATACCTGTGCGGTGGTGCGGCTCAATCAATTGCTGAGCCA
AGGCGACTCGATGGACGAGGCGCTGCAGAAAATGCGCACCTTCTTCGGTTGGTCTCACACCTCCGACCAACCTGCGAACT
ATGCGCGAGCCGTGTTCGAAGACCGCCTTGCGGTGGTCTGGAACAACGTCTTCGATGATCGGGTCGCGGTGCTGCGCGCC
CTACCACCTGGACTCCGCGATGCTGGTCCAACCCGTTGA

Upstream 100 bases:

>100_bases
TTTCTGGCTGTTGCGTTGCTGGGCGCTTGAGGCAGCTCTTTGGCGCAACGGGTCTTGGTGGTCTATGGTATGAATCGCGT
CCTTCGCCGCCGAGGCATCC

Downstream 100 bases:

>100_bases
CCTCCAGCAATGGACTGCGAAGGACGCCGATCACTGGTTGGGCCAGATCGTGCGGCAACTACCTGCCCTGCCGCCCTTGC
TGCGCTATTACGACGACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Family Protein; Prophage; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MVLQVQHPSIPKRLHGAVLVDGCGLPRYWVSVWAQLALADLAELTRLRKLYAIERLYAYADELLGAGALDDALFSLDEAR
LGSILEGWFVSIRNQHQITDSDQKRWRAGLDFVVAVTTWLGQGTRHENRLARLDARWQRLNLLYGQLQIQRPHRTNILRA
LPAVVVEAMYALLDPESDTNPFKGVRTRWRVFTAFVLMLHQGLRRGELLLLNANAIKSGLDARQQRRRYWINVSEQGRVD
TDPRYSKPGIKTADSIRQVPVSELTANLVQCYVDNYRGRPDHPYLLNAQTNTPLSTESLTKLFERISTALPAAVLAELED
RTGKTSITPHDLRHTCAVVRLNQLLSQGDSMDEALQKMRTFFGWSHTSDQPANYARAVFEDRLAVVWNNVFDDRVAVLRA
LPPGLRDAGPTR

Sequences:

>Translated_412_residues
MVLQVQHPSIPKRLHGAVLVDGCGLPRYWVSVWAQLALADLAELTRLRKLYAIERLYAYADELLGAGALDDALFSLDEAR
LGSILEGWFVSIRNQHQITDSDQKRWRAGLDFVVAVTTWLGQGTRHENRLARLDARWQRLNLLYGQLQIQRPHRTNILRA
LPAVVVEAMYALLDPESDTNPFKGVRTRWRVFTAFVLMLHQGLRRGELLLLNANAIKSGLDARQQRRRYWINVSEQGRVD
TDPRYSKPGIKTADSIRQVPVSELTANLVQCYVDNYRGRPDHPYLLNAQTNTPLSTESLTKLFERISTALPAAVLAELED
RTGKTSITPHDLRHTCAVVRLNQLLSQGDSMDEALQKMRTFFGWSHTSDQPANYARAVFEDRLAVVWNNVFDDRVAVLRA
LPPGLRDAGPTR
>Mature_412_residues
MVLQVQHPSIPKRLHGAVLVDGCGLPRYWVSVWAQLALADLAELTRLRKLYAIERLYAYADELLGAGALDDALFSLDEAR
LGSILEGWFVSIRNQHQITDSDQKRWRAGLDFVVAVTTWLGQGTRHENRLARLDARWQRLNLLYGQLQIQRPHRTNILRA
LPAVVVEAMYALLDPESDTNPFKGVRTRWRVFTAFVLMLHQGLRRGELLLLNANAIKSGLDARQQRRRYWINVSEQGRVD
TDPRYSKPGIKTADSIRQVPVSELTANLVQCYVDNYRGRPDHPYLLNAQTNTPLSTESLTKLFERISTALPAAVLAELED
RTGKTSITPHDLRHTCAVVRLNQLLSQGDSMDEALQKMRTFFGWSHTSDQPANYARAVFEDRLAVVWNNVFDDRVAVLRA
LPPGLRDAGPTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46746; Mature: 46746

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLQVQHPSIPKRLHGAVLVDGCGLPRYWVSVWAQLALADLAELTRLRKLYAIERLYAYA
CEEECCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELLGAGALDDALFSLDEARLGSILEGWFVSIRNQHQITDSDQKRWRAGLDFVVAVTTWL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHH
GQGTRHENRLARLDARWQRLNLLYGQLQIQRPHRTNILRALPAVVVEAMYALLDPESDTN
CCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PFKGVRTRWRVFTAFVLMLHQGLRRGELLLLNANAIKSGLDARQQRRRYWINVSEQGRVD
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHEEECCCCCCCCC
TDPRYSKPGIKTADSIRQVPVSELTANLVQCYVDNYRGRPDHPYLLNAQTNTPLSTESLT
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHH
KLFERISTALPAAVLAELEDRTGKTSITPHDLRHTCAVVRLNQLLSQGDSMDEALQKMRT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FFGWSHTSDQPANYARAVFEDRLAVVWNNVFDDRVAVLRALPPGLRDAGPTR
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVLQVQHPSIPKRLHGAVLVDGCGLPRYWVSVWAQLALADLAELTRLRKLYAIERLYAYA
CEEECCCCCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELLGAGALDDALFSLDEARLGSILEGWFVSIRNQHQITDSDQKRWRAGLDFVVAVTTWL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHH
GQGTRHENRLARLDARWQRLNLLYGQLQIQRPHRTNILRALPAVVVEAMYALLDPESDTN
CCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PFKGVRTRWRVFTAFVLMLHQGLRRGELLLLNANAIKSGLDARQQRRRYWINVSEQGRVD
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHEEECCCCCCCCC
TDPRYSKPGIKTADSIRQVPVSELTANLVQCYVDNYRGRPDHPYLLNAQTNTPLSTESLT
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHH
KLFERISTALPAAVLAELEDRTGKTSITPHDLRHTCAVVRLNQLLSQGDSMDEALQKMRT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FFGWSHTSDQPANYARAVFEDRLAVVWNNVFDDRVAVLRALPPGLRDAGPTR
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA