Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is 17546564

Identifier: 17546564

GI number: 17546564

Start: 2026054

End: 2028357

Strand: Reverse

Name: 17546564

Synonym: RSc1845

Alternate gene names: NA

Gene position: 2028357-2026054 (Counterclockwise)

Preceding gene: 17546565

Following gene: 17546563

Centisome position: 54.58

GC content: 64.58

Gene sequence:

>2304_bases
ATGAATGCCGGCTATCGTGCCTACGTGGACTTGGGCCGCACGCTGGCGGAGCAGCGTGGCCTGCAGTGGTTGTTGCCACT
GGAGCCGGACGGGCGTGTGAGCAAGGGGCATGGCTGGAATCTCACTACGCTCGCGGGCGATGTACCGCCGCCCACGCACT
ACCTGAACCATCTCGGCCGCGACGCCAAGATGCTGCAAGCGCTGGCCGAGCCGTCGCTGCGGGCAGCCCCGCTCTCGGTG
GGGTGGCAAGAGCTGATCAAGACGGCGGCACTGGAGCAGTTGCTGGTCAAGCGCAACACCACGGGACACATCGTTGGCAA
CATCGTGCGGCCGTTGCGGGTCCTGGCCACGTGCATGCCGGACAAGGAGCCCTGGCAGTTGACGGTGGAGGACGGCAGTC
GCGCCGTTGAGCTGGCGCGCGGTTTGCAAGCCTGCGGCAAGCTGGGGGAGATGGTGGAAAGCGTGCTGCGCAACCTGTTC
GATGTGCAGCACCTCGCGGACGCCGGACCGCTGTACCGTGGTGTGCCTCGACCGCGATCCGCGTCGACGCGCCGCCGTGC
CGCCTTCCTGAAATCTGAGGACGAGTTGCGCGACAGCCTGGAGCAGCGCAAGCGCGCTGAGCGCTTGCCGGAGCGGCGGG
CGTTCTGGGAGCTGGTGCGCATCGTGATGACCGAGCCGCCGCGCAGCTACGTCGATACGCTGCGCTTCCTGTGCCTGCGC
TCGATGATCGTGACCGGCTTGCGCGTTGGCGAGGCCGTGCTGCTGCCGGCGGACTGGCAACGCAACCGGGTCTACTATGA
CCGGCAAGGCCGACCTACCGGAGAAAAAGGAGGCTATGCGGATGCCTTGATGCTGCGCCACTTCGCGGAAAAGCAGCAGA
CCGAGGAGAGCGACAGCCGGGTGCTGTTCGAAAAGGCCCAGTATGTACCGGAGATGTTCCGCGAGCTGATCACGGAGACA
CTGCAGCGCTGCGTGGAGCTGACCGAGCCATTGCGCCGAACGCTGCGACTGCAAACGGCAACGGGACGGCTGTTGCCCTG
GTACGCCGAGCATGACGTCGTGCCCGCCGCGCACCTGTACCCGCACCTGACGGGCAATCCCTTCTGGGCTGCTGTCGACG
ACGAAGACCGCGCCCGCTTGCAGGAGCGCTATCGGACGCAGTTCGATGTTGCCGCGTTCCAGGAAATCCACGACCTGCAA
CGGAGTGGCCCTAGGCGGCAGTTGGATATGGCAGCCTATATCTATCTGAACCGTCTTGGCAAAGCCATGCAGGCCGACGA
CTGCACCCTGTCGTTCCGGCGTCCCGACGGAAGCGTGATCCCGACGGACGCGCGCAAGCAATGGGGACAGACCTGTTTGC
ACATCGGCGAACTCGAAGCCTATCTGCGAGTCGCGGTACCGACCAAGCTCTCGGACACGGAAGCGTTGCCGCTGGCGACG
GGCACGCTGCAGAGTTGGGAGTTGTTGTTCCTGACGCCGAAACGCTCGCTGGCGGAGGAACGCGATGACGGTCTCTGCGA
TGTGACGCGCGTGATGGCAGTGAACCGGCCGGATGGGGGCTTCGTGGCGAACGCGCTTGGGGAGCGTTCGATCGGCGAGT
CTCTGTTCGAGCGCTATGGACAAAGCGCCGAAGACAAGCAGTTGCGTCTCGAGTCGCACATGCTGCGGCACCTGCAGAAC
ACCGAGTTGTTCCGGCTTGGCGTCGCCGACACGATCATCTCCAAGCGCTTTAACCGGCGTAGCGTAGCCCAGAGCTACGA
GTACGACCATCGCAGCCTGGCCGAGCAGTTGGATCAGATTGAGTTGCCGCCGGAAGTGGAGATCTCCTTGGGCGAAAAGG
CCTCCACGGTGGCCAAGATGATCCAGGCTGGCAGGGCGAGCGGCCCCGTGGTCGCCACGTTCCTGCGCATCCAGGCCGAT
GAGGGCGACGAGGCGGCCTTCGCTTACTTGAAGACGGAAGCCGACGGCTTCCATGCGACACCCTATGGGCACTGCTTGAA
CAGCTTTACGGTCGATCCGTGCCCCAAGCACCTGGAATGCTTTACTGGTTGCCGGCACCTCTCTGCCACCAACCTCCCGG
AAAACCGCGCGCATCTGACCAGCCTCGAGGGCAAGCTTGTTGCCGCACTCGAGCATGCCCAGGCGCGGCCAGCAACGACG
CCCGGGCGTGATAACCAGATCGCGCATGCACAGGTTCGGCTGGACGGCGTGCGCAAGCTGCTGACCACCGCTGACGGCGA
GCGTCCGTTCCCTGATGGACCGGACCTATCCATGCCGTCTCCACTTGGAGTGCTCGATGACTGA

Upstream 100 bases:

>100_bases
ACACCTCGCGCAGCGAAGCATCCTCTCCCGCTTACTTGCAACTCCAGCATGCCATTGCCGGCGTGCAAGCGATCCTCGCC
GAGCTGGAGGGAGACGCGCA

Downstream 100 bases:

>100_bases
GACCAAGACCCCGGAATCGATACCTGACGATCCAGACCTGCAACGCATTCTGGAAGAGCTGCTGGCCCACGACGAGAACA
TTACTGCGCGAGCGGTCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 767; Mature: 767

Protein sequence:

>767_residues
MNAGYRAYVDLGRTLAEQRGLQWLLPLEPDGRVSKGHGWNLTTLAGDVPPPTHYLNHLGRDAKMLQALAEPSLRAAPLSV
GWQELIKTAALEQLLVKRNTTGHIVGNIVRPLRVLATCMPDKEPWQLTVEDGSRAVELARGLQACGKLGEMVESVLRNLF
DVQHLADAGPLYRGVPRPRSASTRRRAAFLKSEDELRDSLEQRKRAERLPERRAFWELVRIVMTEPPRSYVDTLRFLCLR
SMIVTGLRVGEAVLLPADWQRNRVYYDRQGRPTGEKGGYADALMLRHFAEKQQTEESDSRVLFEKAQYVPEMFRELITET
LQRCVELTEPLRRTLRLQTATGRLLPWYAEHDVVPAAHLYPHLTGNPFWAAVDDEDRARLQERYRTQFDVAAFQEIHDLQ
RSGPRRQLDMAAYIYLNRLGKAMQADDCTLSFRRPDGSVIPTDARKQWGQTCLHIGELEAYLRVAVPTKLSDTEALPLAT
GTLQSWELLFLTPKRSLAEERDDGLCDVTRVMAVNRPDGGFVANALGERSIGESLFERYGQSAEDKQLRLESHMLRHLQN
TELFRLGVADTIISKRFNRRSVAQSYEYDHRSLAEQLDQIELPPEVEISLGEKASTVAKMIQAGRASGPVVATFLRIQAD
EGDEAAFAYLKTEADGFHATPYGHCLNSFTVDPCPKHLECFTGCRHLSATNLPENRAHLTSLEGKLVAALEHAQARPATT
PGRDNQIAHAQVRLDGVRKLLTTADGERPFPDGPDLSMPSPLGVLDD

Sequences:

>Translated_767_residues
MNAGYRAYVDLGRTLAEQRGLQWLLPLEPDGRVSKGHGWNLTTLAGDVPPPTHYLNHLGRDAKMLQALAEPSLRAAPLSV
GWQELIKTAALEQLLVKRNTTGHIVGNIVRPLRVLATCMPDKEPWQLTVEDGSRAVELARGLQACGKLGEMVESVLRNLF
DVQHLADAGPLYRGVPRPRSASTRRRAAFLKSEDELRDSLEQRKRAERLPERRAFWELVRIVMTEPPRSYVDTLRFLCLR
SMIVTGLRVGEAVLLPADWQRNRVYYDRQGRPTGEKGGYADALMLRHFAEKQQTEESDSRVLFEKAQYVPEMFRELITET
LQRCVELTEPLRRTLRLQTATGRLLPWYAEHDVVPAAHLYPHLTGNPFWAAVDDEDRARLQERYRTQFDVAAFQEIHDLQ
RSGPRRQLDMAAYIYLNRLGKAMQADDCTLSFRRPDGSVIPTDARKQWGQTCLHIGELEAYLRVAVPTKLSDTEALPLAT
GTLQSWELLFLTPKRSLAEERDDGLCDVTRVMAVNRPDGGFVANALGERSIGESLFERYGQSAEDKQLRLESHMLRHLQN
TELFRLGVADTIISKRFNRRSVAQSYEYDHRSLAEQLDQIELPPEVEISLGEKASTVAKMIQAGRASGPVVATFLRIQAD
EGDEAAFAYLKTEADGFHATPYGHCLNSFTVDPCPKHLECFTGCRHLSATNLPENRAHLTSLEGKLVAALEHAQARPATT
PGRDNQIAHAQVRLDGVRKLLTTADGERPFPDGPDLSMPSPLGVLDD
>Mature_767_residues
MNAGYRAYVDLGRTLAEQRGLQWLLPLEPDGRVSKGHGWNLTTLAGDVPPPTHYLNHLGRDAKMLQALAEPSLRAAPLSV
GWQELIKTAALEQLLVKRNTTGHIVGNIVRPLRVLATCMPDKEPWQLTVEDGSRAVELARGLQACGKLGEMVESVLRNLF
DVQHLADAGPLYRGVPRPRSASTRRRAAFLKSEDELRDSLEQRKRAERLPERRAFWELVRIVMTEPPRSYVDTLRFLCLR
SMIVTGLRVGEAVLLPADWQRNRVYYDRQGRPTGEKGGYADALMLRHFAEKQQTEESDSRVLFEKAQYVPEMFRELITET
LQRCVELTEPLRRTLRLQTATGRLLPWYAEHDVVPAAHLYPHLTGNPFWAAVDDEDRARLQERYRTQFDVAAFQEIHDLQ
RSGPRRQLDMAAYIYLNRLGKAMQADDCTLSFRRPDGSVIPTDARKQWGQTCLHIGELEAYLRVAVPTKLSDTEALPLAT
GTLQSWELLFLTPKRSLAEERDDGLCDVTRVMAVNRPDGGFVANALGERSIGESLFERYGQSAEDKQLRLESHMLRHLQN
TELFRLGVADTIISKRFNRRSVAQSYEYDHRSLAEQLDQIELPPEVEISLGEKASTVAKMIQAGRASGPVVATFLRIQAD
EGDEAAFAYLKTEADGFHATPYGHCLNSFTVDPCPKHLECFTGCRHLSATNLPENRAHLTSLEGKLVAALEHAQARPATT
PGRDNQIAHAQVRLDGVRKLLTTADGERPFPDGPDLSMPSPLGVLDD

Specific function: Unknown

COG id: COG4688

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86227; Mature: 86227

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAGYRAYVDLGRTLAEQRGLQWLLPLEPDGRVSKGHGWNLTTLAGDVPPPTHYLNHLGR
CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCC
DAKMLQALAEPSLRAAPLSVGWQELIKTAALEQLLVKRNTTGHIVGNIVRPLRVLATCMP
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
DKEPWQLTVEDGSRAVELARGLQACGKLGEMVESVLRNLFDVQHLADAGPLYRGVPRPRS
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCC
ASTRRRAAFLKSEDELRDSLEQRKRAERLPERRAFWELVRIVMTEPPRSYVDTLRFLCLR
CCHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SMIVTGLRVGEAVLLPADWQRNRVYYDRQGRPTGEKGGYADALMLRHFAEKQQTEESDSR
HHHHHHHHCCCEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
VLFEKAQYVPEMFRELITETLQRCVELTEPLRRTLRLQTATGRLLPWYAEHDVVPAAHLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHC
PHLTGNPFWAAVDDEDRARLQERYRTQFDVAAFQEIHDLQRSGPRRQLDMAAYIYLNRLG
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KAMQADDCTLSFRRPDGSVIPTDARKQWGQTCLHIGELEAYLRVAVPTKLSDTEALPLAT
HHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEC
GTLQSWELLFLTPKRSLAEERDDGLCDVTRVMAVNRPDGGFVANALGERSIGESLFERYG
CCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHC
QSAEDKQLRLESHMLRHLQNTELFRLGVADTIISKRFNRRSVAQSYEYDHRSLAEQLDQI
CCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
ELPPEVEISLGEKASTVAKMIQAGRASGPVVATFLRIQADEGDEAAFAYLKTEADGFHAT
CCCCCCEEECCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCC
PYGHCLNSFTVDPCPKHLECFTGCRHLSATNLPENRAHLTSLEGKLVAALEHAQARPATT
CHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCC
PGRDNQIAHAQVRLDGVRKLLTTADGERPFPDGPDLSMPSPLGVLDD
CCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNAGYRAYVDLGRTLAEQRGLQWLLPLEPDGRVSKGHGWNLTTLAGDVPPPTHYLNHLGR
CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCC
DAKMLQALAEPSLRAAPLSVGWQELIKTAALEQLLVKRNTTGHIVGNIVRPLRVLATCMP
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
DKEPWQLTVEDGSRAVELARGLQACGKLGEMVESVLRNLFDVQHLADAGPLYRGVPRPRS
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCC
ASTRRRAAFLKSEDELRDSLEQRKRAERLPERRAFWELVRIVMTEPPRSYVDTLRFLCLR
CCHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SMIVTGLRVGEAVLLPADWQRNRVYYDRQGRPTGEKGGYADALMLRHFAEKQQTEESDSR
HHHHHHHHCCCEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
VLFEKAQYVPEMFRELITETLQRCVELTEPLRRTLRLQTATGRLLPWYAEHDVVPAAHLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHC
PHLTGNPFWAAVDDEDRARLQERYRTQFDVAAFQEIHDLQRSGPRRQLDMAAYIYLNRLG
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KAMQADDCTLSFRRPDGSVIPTDARKQWGQTCLHIGELEAYLRVAVPTKLSDTEALPLAT
HHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEC
GTLQSWELLFLTPKRSLAEERDDGLCDVTRVMAVNRPDGGFVANALGERSIGESLFERYG
CCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHC
QSAEDKQLRLESHMLRHLQNTELFRLGVADTIISKRFNRRSVAQSYEYDHRSLAEQLDQI
CCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
ELPPEVEISLGEKASTVAKMIQAGRASGPVVATFLRIQADEGDEAAFAYLKTEADGFHAT
CCCCCCEEECCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCC
PYGHCLNSFTVDPCPKHLECFTGCRHLSATNLPENRAHLTSLEGKLVAALEHAQARPATT
CHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCC
PGRDNQIAHAQVRLDGVRKLLTTADGERPFPDGPDLSMPSPLGVLDD
CCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA