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The map label for this gene is 17546520

Identifier: 17546520

GI number: 17546520

Start: 1937772

End: 1939340

Strand: Direct

Name: 17546520

Synonym: RSc1801

Alternate gene names: NA

Gene position: 1937772-1939340 (Clockwise)

Preceding gene: 17546519

Following gene: 17546526

Centisome position: 52.14

GC content: 69.92

Gene sequence:

>1569_bases
GTGCGCGCTCCATCGGCCGATGCGCAGCCGGGGCCGCCCGCGCCCGGCCCGGCACGTCCGGCCAGGAGCGCGGCCGGCTC
GTCGCTCCTGCAAGGGCTGGCGCAACTGCTGTCGCTGTGCCAGCCCAGGCCGGCGAGACCGCTGCCCCAGCTGCCACCGG
ACATCTTTCGGGAAATCGCCCGCCGCTCCGATCCCTTGACCGTCCAGCGGCTGCGGGTCGCCAGCAAGCCGGTGAAAGCC
GCGATCGAGGCCGATATGCGGGAGCTGGTCATCAAGGACCGGGCCGGCCTCGCGGGCGTTTTGCGCGCGGGCAACTATCC
GGCCCTGGAGAAGCTGACGCTTGCCGGCACGTTCACGGACGACGATCTGCGGGGGCTGCCCGCATCGCTGAAGGCACTGG
ACCTGAGCCGGTGCCGGGGCTCGATCACGGCCGCCGGCATCGCGCACCTGAGCCGTCTGCCGCTGGTCCGGTTGAATGTC
CGCAACAAGCGCATCGGCGCCGAGGGCGCGCGGCTGCTGGCGAATCACCCGACGCTGACCTCGCTCAACGTCAGCAACGG
CCGGATCGGCCCGGAAGGCGCGCAAGCGCTGGCAGCCAACACGCGGCTGACCACGCTCAATGTCAGCGGCAACCGGATCG
GCGTGGCCGGCGCGAAGGCGCTGGCCGCCAACCAGACGCTGCGTTCGCTCGACGTCAGCGACAACCGCATTGGCGACGAG
GGCGCACGCGAGCTGGCCGCCTGCACGCAGCTGACCACGCTCGATGCCAACCGTAACGGGATCGGCGTCGATGGGGCGAC
GGCGCTGGCGGCCAGCCGGACGCTCACCTCGCTCGCCATCGGCGGCAATGAGATTGGCGACGCGGGTGTGCTGGCGCTCG
CCGCCAACGCGCGGCTGACCACGCTCAACGTCGAGAGCACCGGGGTCGGCGCCGATGGGGTCAAGGCACTGGCGGCCAGC
AAGACGCTGACCTGGCTGCGCCTTGACGGCAACGACATCGGCAATGCGGGTGCCACAGCCCTGGCCGCCAGCACCAGCCT
GACCACGCTCCATCTCGAGCACAGCCGGATCGGCGCGGAGGGCGCGCAAGCCCTGGCCGCCAACACGAAGCTGACCACGC
TCGATCTCGGCTACAACGACATCGGCGATGCCGGCGTGCGGGCGTTGAGCGCCAATGCCACGCTGGTCTGGCTCAGTGTG
CGCCGCAATAACCTCGAGGATGCGAGTGCGGTCAGCCTGGCGGCCGGCAAGACACTGACCACGCTCGACATCAGCGGCAA
CGGCATCCAGGATCAGGGGGCCAAGGCCTTGGCCGCCAACCCGACGCTGACCACGCTCGACGTCAGCAGCAACGACATCA
AGAACGCGGGCGCGCGGGCACTGGCCGCCAATGCCCGGCTGGTGTCGCTCGACCTGCGCAACAACAGGATGGAAGAATCT
GGTACGCGAGCGCTGCTGGCCAACCGCACGCTGTCGTCGCTCGGCGTGAGCCTCAACTGTTGCGGCCAGCATCTCATCGC
CGAGCTGATGGCGTGGGCGAACCACAATGGCGTGACGATGCGGCACTGA

Upstream 100 bases:

>100_bases
GTGCGGCGCATGCGCTGTGCGGCGCCGTGTCAGAGCAGACTGGGCGTGGCGCGTGAAACCTGTCGCTCCGGTTGGCCAGT
CGTCATCCGCCGCCGATGGC

Downstream 100 bases:

>100_bases
ACATGCCGGTGAGTTTGCCGGCGCCTTGCTTCGCTCGGGTTCAGGGGCGCTGCGTCGCCGGCATCACGCCTGCAGCGGGC
AGTGCGTGGCCGGGACGATG

Product: GALA protein 3

Products: NA

Alternate protein names: GALA Protein; Type III Effector; Leucine-Rich Repeat-Containing Ribonuclease Inhibitor; Type III Effector Gala6 Protein; Type III Effector Protein; Cyclin Domain-Containing Protein

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MRAPSADAQPGPPAPGPARPARSAAGSSLLQGLAQLLSLCQPRPARPLPQLPPDIFREIARRSDPLTVQRLRVASKPVKA
AIEADMRELVIKDRAGLAGVLRAGNYPALEKLTLAGTFTDDDLRGLPASLKALDLSRCRGSITAAGIAHLSRLPLVRLNV
RNKRIGAEGARLLANHPTLTSLNVSNGRIGPEGAQALAANTRLTTLNVSGNRIGVAGAKALAANQTLRSLDVSDNRIGDE
GARELAACTQLTTLDANRNGIGVDGATALAASRTLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAAS
KTLTWLRLDGNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGDAGVRALSANATLVWLSV
RRNNLEDASAVSLAAGKTLTTLDISGNGIQDQGAKALAANPTLTTLDVSSNDIKNAGARALAANARLVSLDLRNNRMEES
GTRALLANRTLSSLGVSLNCCGQHLIAELMAWANHNGVTMRH

Sequences:

>Translated_522_residues
MRAPSADAQPGPPAPGPARPARSAAGSSLLQGLAQLLSLCQPRPARPLPQLPPDIFREIARRSDPLTVQRLRVASKPVKA
AIEADMRELVIKDRAGLAGVLRAGNYPALEKLTLAGTFTDDDLRGLPASLKALDLSRCRGSITAAGIAHLSRLPLVRLNV
RNKRIGAEGARLLANHPTLTSLNVSNGRIGPEGAQALAANTRLTTLNVSGNRIGVAGAKALAANQTLRSLDVSDNRIGDE
GARELAACTQLTTLDANRNGIGVDGATALAASRTLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAAS
KTLTWLRLDGNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGDAGVRALSANATLVWLSV
RRNNLEDASAVSLAAGKTLTTLDISGNGIQDQGAKALAANPTLTTLDVSSNDIKNAGARALAANARLVSLDLRNNRMEES
GTRALLANRTLSSLGVSLNCCGQHLIAELMAWANHNGVTMRH
>Mature_522_residues
MRAPSADAQPGPPAPGPARPARSAAGSSLLQGLAQLLSLCQPRPARPLPQLPPDIFREIARRSDPLTVQRLRVASKPVKA
AIEADMRELVIKDRAGLAGVLRAGNYPALEKLTLAGTFTDDDLRGLPASLKALDLSRCRGSITAAGIAHLSRLPLVRLNV
RNKRIGAEGARLLANHPTLTSLNVSNGRIGPEGAQALAANTRLTTLNVSGNRIGVAGAKALAANQTLRSLDVSDNRIGDE
GARELAACTQLTTLDANRNGIGVDGATALAASRTLTSLAIGGNEIGDAGVLALAANARLTTLNVESTGVGADGVKALAAS
KTLTWLRLDGNDIGNAGATALAASTSLTTLHLEHSRIGAEGAQALAANTKLTTLDLGYNDIGDAGVRALSANATLVWLSV
RRNNLEDASAVSLAAGKTLTTLDISGNGIQDQGAKALAANPTLTTLDVSSNDIKNAGARALAANARLVSLDLRNNRMEES
GTRALLANRTLSSLGVSLNCCGQHLIAELMAWANHNGVTMRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI118918429, Length=394, Percent_Identity=34.7715736040609, Blast_Score=130, Evalue=4e-30,
Organism=Homo sapiens, GI158321897, Length=393, Percent_Identity=28.498727735369, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI119395764, Length=257, Percent_Identity=27.6264591439689, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI34878693, Length=257, Percent_Identity=27.6264591439689, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI28827813, Length=316, Percent_Identity=26.5822784810127, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI168986655, Length=434, Percent_Identity=26.036866359447, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI188536002, Length=200, Percent_Identity=30, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI42822874, Length=357, Percent_Identity=26.3305322128852, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI42822872, Length=357, Percent_Identity=26.3305322128852, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI42822870, Length=357, Percent_Identity=26.3305322128852, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI42822868, Length=357, Percent_Identity=26.3305322128852, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI42822866, Length=357, Percent_Identity=26.3305322128852, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI42822864, Length=357, Percent_Identity=26.3305322128852, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI21361547, Length=357, Percent_Identity=26.3305322128852, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI42794608, Length=357, Percent_Identity=26.3305322128852, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI5174617, Length=209, Percent_Identity=32.0574162679426, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI11545912, Length=289, Percent_Identity=30.7958477508651, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI289666778, Length=250, Percent_Identity=28, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI21955154, Length=337, Percent_Identity=25.5192878338279, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI289666780, Length=262, Percent_Identity=27.4809160305344, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17542470, Length=362, Percent_Identity=24.0331491712707, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17542472, Length=362, Percent_Identity=24.0331491712707, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71980576, Length=378, Percent_Identity=28.042328042328, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71984630, Length=460, Percent_Identity=22.1739130434783, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI17136634, Length=381, Percent_Identity=26.246719160105, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI281363494, Length=326, Percent_Identity=23.9263803680982, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281363846, Length=276, Percent_Identity=26.0869565217391, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24667524, Length=333, Percent_Identity=23.1231231231231, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21358607, Length=371, Percent_Identity=21.832884097035, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24662159, Length=427, Percent_Identity=23.4192037470726, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI161077058, Length=322, Percent_Identity=21.7391304347826, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24664561, Length=319, Percent_Identity=24.4514106583072, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53767; Mature: 53767

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPSADAQPGPPAPGPARPARSAAGSSLLQGLAQLLSLCQPRPARPLPQLPPDIFREIA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
RRSDPLTVQRLRVASKPVKAAIEADMRELVIKDRAGLAGVLRAGNYPALEKLTLAGTFTD
HCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHEEEEEEECCC
DDLRGLPASLKALDLSRCRGSITAAGIAHLSRLPLVRLNVRNKRIGAEGARLLANHPTLT
CHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCHHEEECCCCEE
SLNVSNGRIGPEGAQALAANTRLTTLNVSGNRIGVAGAKALAANQTLRSLDVSDNRIGDE
EEECCCCCCCCCHHHHHCCCCEEEEEEECCCEEEECCHHHHHHCCHHHHCCCCCCCCCCH
GARELAACTQLTTLDANRNGIGVDGATALAASRTLTSLAIGGNEIGDAGVLALAANARLT
HHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEEEEECCCEEE
TLNVESTGVGADGVKALAASKTLTWLRLDGNDIGNAGATALAASTSLTTLHLEHSRIGAE
EEEECCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCHHEEECCCEEEEEEEHHHCCCC
GAQALAANTKLTTLDLGYNDIGDAGVRALSANATLVWLSVRRNNLEDASAVSLAAGKTLT
HHHHHCCCCEEEEEECCCCCCCCHHHEEEECCCEEEEEEEECCCCCCHHHEEEECCCEEE
TLDISGNGIQDQGAKALAANPTLTTLDVSSNDIKNAGARALAANARLVSLDLRNNRMEES
EEEECCCCCCCCCCEEEECCCCEEEEECCCCCCHHCCCCEEECCCEEEEEECCCCCCCCC
GTRALLANRTLSSLGVSLNCCGQHLIAELMAWANHNGVTMRH
CCEEEEHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MRAPSADAQPGPPAPGPARPARSAAGSSLLQGLAQLLSLCQPRPARPLPQLPPDIFREIA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
RRSDPLTVQRLRVASKPVKAAIEADMRELVIKDRAGLAGVLRAGNYPALEKLTLAGTFTD
HCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHEEEEEEECCC
DDLRGLPASLKALDLSRCRGSITAAGIAHLSRLPLVRLNVRNKRIGAEGARLLANHPTLT
CHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCHHEEECCCCEE
SLNVSNGRIGPEGAQALAANTRLTTLNVSGNRIGVAGAKALAANQTLRSLDVSDNRIGDE
EEECCCCCCCCCHHHHHCCCCEEEEEEECCCEEEECCHHHHHHCCHHHHCCCCCCCCCCH
GARELAACTQLTTLDANRNGIGVDGATALAASRTLTSLAIGGNEIGDAGVLALAANARLT
HHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEEEEECCCEEE
TLNVESTGVGADGVKALAASKTLTWLRLDGNDIGNAGATALAASTSLTTLHLEHSRIGAE
EEEECCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCHHEEECCCEEEEEEEHHHCCCC
GAQALAANTKLTTLDLGYNDIGDAGVRALSANATLVWLSVRRNNLEDASAVSLAAGKTLT
HHHHHCCCCEEEEEECCCCCCCCHHHEEEECCCEEEEEEEECCCCCCHHHEEEECCCEEE
TLDISGNGIQDQGAKALAANPTLTTLDVSSNDIKNAGARALAANARLVSLDLRNNRMEES
EEEECCCCCCCCCCEEEECCCCEEEEECCCCCCHHCCCCEEECCCEEEEEECCCCCCCCC
GTRALLANRTLSSLGVSLNCCGQHLIAELMAWANHNGVTMRH
CCEEEEHHCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA