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The map label for this gene is 17546499

Identifier: 17546499

GI number: 17546499

Start: 1916440

End: 1917258

Strand: Reverse

Name: 17546499

Synonym: RSc1780

Alternate gene names: NA

Gene position: 1917258-1916440 (Counterclockwise)

Preceding gene: 17546500

Following gene: 17546490

Centisome position: 51.59

GC content: 71.92

Gene sequence:

>819_bases
ATGTGCCTGATTCTCACGGCCTGGCACGCGCACCCTGCCTATGCGCTGGTGGTGGCCGCCAACCGGGACGAATTCTATGA
CCGCCCTGCCGCGCCGCTGGCGTGGTGGAGCGATGCGCCCCACGTGCTGGCCGGGCGCGACCTGGCCCAGGTGGTCGGTC
ACGCGGGCACCTGGATGGGCATGACGCGCGACGGACGCTTCGCCGCGCTCACCAACTACCGCGCCCCCTCCGAGCGGCGG
CCCGATGCCCGCTCGCGCGGCGAGCTGGTCGCCAATTTCCTGGCCGCCGAAGACGCCTCGATTCCCGCCTACCTCGACCA
GCTGAAGGCCCGCAACGGCGTCTACAACGGCTACAACCTGCTGACCGCCACGCGCGACGAACTCTGGTGGACCAGCAACC
GCGCCGAGGCGCCGCGCCAGCTCGCGCCCGGCGTGTACGGGCTGTCCAACGCGCTGCTCGATACGCCGTGGTTCAAGGTA
CGGCACCGTGTCGCCGCCTTCGCCGAGGCGCTGGCCGCCGATACCGGCCGCCACGGCAACGCCATCGACGTGGCGCGCTA
CCTCGACCTGCTGGCCGAGACGCGCGAAGCCCCCCTCGGCGCCCTGCCCGCCACCGGCGTGGCGCCGGAATGGGAAAAGC
TGCTGTCGGCCGCCTTCATCCGCTCCCCGCGCTACGGCACGCGCGCCAGCACCGTGCTGCGCATCCGCCACGACGGCTGC
TTCGACGTGACCGAGCGGCGCTTCGACGCGCAGGGTCAGATCGGCGAGACGCGCTACCTGGGCGTGCTCGACGCAGTGAC
CCAGGCCGATACGCCGTAA

Upstream 100 bases:

>100_bases
GTCGCTGCAAAGTTCCGGCAGGCTGCTATGCTTGGCCGGAGGTCGCGCAACGCGGGTCATCACATGGCCCCGAGCGCGGC
GTGTTCACAAGGATGTTCTC

Downstream 100 bases:

>100_bases
CGGCGCGCCGGCCCGGGAGGGTGCGCTGGCGATATCGGGTCAAGCCGCTGAAGGGCGCTGCGATTGCGATGCATGGCATG
CCGTGCCCGCACAGGCTGCC

Product: signal peptide protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MCLILTAWHAHPAYALVVAANRDEFYDRPAAPLAWWSDAPHVLAGRDLAQVVGHAGTWMGMTRDGRFAALTNYRAPSERR
PDARSRGELVANFLAAEDASIPAYLDQLKARNGVYNGYNLLTATRDELWWTSNRAEAPRQLAPGVYGLSNALLDTPWFKV
RHRVAAFAEALAADTGRHGNAIDVARYLDLLAETREAPLGALPATGVAPEWEKLLSAAFIRSPRYGTRASTVLRIRHDGC
FDVTERRFDAQGQIGETRYLGVLDAVTQADTP

Sequences:

>Translated_272_residues
MCLILTAWHAHPAYALVVAANRDEFYDRPAAPLAWWSDAPHVLAGRDLAQVVGHAGTWMGMTRDGRFAALTNYRAPSERR
PDARSRGELVANFLAAEDASIPAYLDQLKARNGVYNGYNLLTATRDELWWTSNRAEAPRQLAPGVYGLSNALLDTPWFKV
RHRVAAFAEALAADTGRHGNAIDVARYLDLLAETREAPLGALPATGVAPEWEKLLSAAFIRSPRYGTRASTVLRIRHDGC
FDVTERRFDAQGQIGETRYLGVLDAVTQADTP
>Mature_272_residues
MCLILTAWHAHPAYALVVAANRDEFYDRPAAPLAWWSDAPHVLAGRDLAQVVGHAGTWMGMTRDGRFAALTNYRAPSERR
PDARSRGELVANFLAAEDASIPAYLDQLKARNGVYNGYNLLTATRDELWWTSNRAEAPRQLAPGVYGLSNALLDTPWFKV
RHRVAAFAEALAADTGRHGNAIDVARYLDLLAETREAPLGALPATGVAPEWEKLLSAAFIRSPRYGTRASTVLRIRHDGC
FDVTERRFDAQGQIGETRYLGVLDAVTQADTP

Specific function: Unknown

COG id: COG3332

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI190570176, Length=260, Percent_Identity=38.0769230769231, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17566294, Length=278, Percent_Identity=24.1007194244604, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI18859691, Length=253, Percent_Identity=29.2490118577075, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29955; Mature: 29955

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLILTAWHAHPAYALVVAANRDEFYDRPAAPLAWWSDAPHVLAGRDLAQVVGHAGTWMG
CEEEEEECCCCCEEEEEEECCCHHHHCCCCCCEEECCCCCCHHHCCHHHHHHCCCCCCCC
MTRDGRFAALTNYRAPSERRPDARSRGELVANFLAAEDASIPAYLDQLKARNGVYNGYNL
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEE
LTATRDELWWTSNRAEAPRQLAPGVYGLSNALLDTPWFKVRHRVAAFAEALAADTGRHGN
EEECHHHHEECCCCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
AIDVARYLDLLAETREAPLGALPATGVAPEWEKLLSAAFIRSPRYGTRASTVLRIRHDGC
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC
FDVTERRFDAQGQIGETRYLGVLDAVTQADTP
CCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MCLILTAWHAHPAYALVVAANRDEFYDRPAAPLAWWSDAPHVLAGRDLAQVVGHAGTWMG
CEEEEEECCCCCEEEEEEECCCHHHHCCCCCCEEECCCCCCHHHCCHHHHHHCCCCCCCC
MTRDGRFAALTNYRAPSERRPDARSRGELVANFLAAEDASIPAYLDQLKARNGVYNGYNL
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEE
LTATRDELWWTSNRAEAPRQLAPGVYGLSNALLDTPWFKVRHRVAAFAEALAADTGRHGN
EEECHHHHEECCCCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
AIDVARYLDLLAETREAPLGALPATGVAPEWEKLLSAAFIRSPRYGTRASTVLRIRHDGC
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC
FDVTERRFDAQGQIGETRYLGVLDAVTQADTP
CCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA