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The map label for this gene is TIS1421a

Identifier: 17546391

GI number: 17546391

Start: 1792610

End: 1793014

Strand: Reverse

Name: TIS1421a

Synonym: RSc1672

Alternate gene names: NA

Gene position: 1793014-1792610 (Counterclockwise)

Preceding gene: 17546392

Following gene: 17546390

Centisome position: 48.25

GC content: 63.21

Gene sequence:

>405_bases
ATGGCACGAAAGAAGATCAGCAATGAACTGTGGAAGGCATTGCAACCGCTGCTGCCGGTTGTGGAGCCTTCGACCAAAGG
CGGTCGTCCGCGCGTGGATGATCGGGCGGCGCTCAACGGCATCCTGTTTGTTCTGCATACCGGTATCCCGTGGGAAGACC
TGCCTAAAGAACTGGGCTTTGGCAGCGGCATGACGTGCTGGCGTCGCCTGCGGGAGTGGCAGGCCAACGGCGTTTGGGAG
CGGCTGCATTTGGCTCTGCTCAAGCGCCTACGCGAACACGACCAGATCGACTGGAGCCGAGCCAGTGTCGACGGTGCAAC
GGTGGCCAGCCCCCGGGGGGCGAGCAGACGGGGCCGAATCCAACGGATCGCGGCAAGCTCGGTAGCAAGCGCCATCTCGT
CGTAG

Upstream 100 bases:

>100_bases
CCACTCGTTATCGGACCTGCGAAAACCTGCTGCGACTCGCATTTAGTGCCGCTAACAAAACCAAGTCATCGAACGCAGGT
GGTTGAGCGTTGTTGTTGGC

Downstream 100 bases:

>100_bases
ATCGGCGCGGCGTGCCGTTGGCGCTGATGGTCACCGGTGCCAATCGTCACGACTCGGTGGTGTTCGAGGTGCTCGTTGAC
GCCATCCCGAGCGTGCCCGG

Product: TIS1421-transposase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MARKKISNELWKALQPLLPVVEPSTKGGRPRVDDRAALNGILFVLHTGIPWEDLPKELGFGSGMTCWRRLREWQANGVWE
RLHLALLKRLREHDQIDWSRASVDGATVASPRGASRRGRIQRIAASSVASAISS

Sequences:

>Translated_134_residues
MARKKISNELWKALQPLLPVVEPSTKGGRPRVDDRAALNGILFVLHTGIPWEDLPKELGFGSGMTCWRRLREWQANGVWE
RLHLALLKRLREHDQIDWSRASVDGATVASPRGASRRGRIQRIAASSVASAISS
>Mature_133_residues
ARKKISNELWKALQPLLPVVEPSTKGGRPRVDDRAALNGILFVLHTGIPWEDLPKELGFGSGMTCWRRLREWQANGVWER
LHLALLKRLREHDQIDWSRASVDGATVASPRGASRRGRIQRIAASSVASAISS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14958; Mature: 14827

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKKISNELWKALQPLLPVVEPSTKGGRPRVDDRAALNGILFVLHTGIPWEDLPKELGF
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCC
GSGMTCWRRLREWQANGVWERLHLALLKRLREHDQIDWSRASVDGATVASPRGASRRGRI
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHH
QRIAASSVASAISS
HHHHHHHHHHHHCC
>Mature Secondary Structure 
ARKKISNELWKALQPLLPVVEPSTKGGRPRVDDRAALNGILFVLHTGIPWEDLPKELGF
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCC
GSGMTCWRRLREWQANGVWERLHLALLKRLREHDQIDWSRASVDGATVASPRGASRRGRI
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHH
QRIAASSVASAISS
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1650732 [H]