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The map label for this gene is etf [C]

Identifier: 17546286

GI number: 17546286

Start: 1682839

End: 1684527

Strand: Reverse

Name: etf [C]

Synonym: RSc1567

Alternate gene names: 17546286

Gene position: 1684527-1682839 (Counterclockwise)

Preceding gene: 17546288

Following gene: 17546281

Centisome position: 45.33

GC content: 67.02

Gene sequence:

>1689_bases
ATGAACCAGCAGCAGCTCCTCGAACAGTACGGTCCCCGCGAATCCATGGAGTACGACGTCGTGATCGTCGGCGGCGGGCC
GGCTGGCCTGGCGACCGCGATCCGCATCAAGCAGCGCGCGGCCGAGACCGGCAAGGACGTTTCCGTGGTCGTGCTTGAGA
AAGGCTCCGAGCCCGGCGCGCACATTCTCTCGGGCGCCGTGATGGACCCGCGCGCGATCGACGAGCTGCTGCCCGACTGT
AAGGCACAAGGCGCCCCGCTCAACCAGCCCGTCACCGGCGACGATGTGCTGTTCCTGAGCGAGACCGGCGCCACGCGCAC
CCCCGACTGGCTGGTGCCGCGCAACCTGCACAACGAAGGCTGCTACGTCATCTCGCTGTCCAACGTCGTCAAATGGCTGG
CGACGCAGGCCGAGGGCCTGGGCGTGGAGATCTTCCCCGGCTTTGCCGCCGCGGAGGTGCTCTACGACGATCGCGGCGCC
GTGCGCGGCGTGGCCACCGGCAACATGGGGGTCGGCAAGGACGGCGAGCCGACCGACCACTTCCAGCTCGGCATGGAGCT
GCTGGGCAAGTACACCATCTTCGCCGAAGGCGCGCGCGGCCATCTGGGCCGGCAGTTGCTCGACAAGTACAAGCTCGATG
CCGGCAAGGACCCGCAGAGCTTCGCCATCGGCATCAAGGAGCTGTGGGAGATCGACCCGGCCAAGGCCAAGCCCGGCCTG
GTGGTGCACACCGCCGGCTGGCCGATGGATGCCGATACGTTCGGCGGCGGCTTCCTGTACCACCTGGAAGACAACAAGGT
CACGCTCGGCTTCGTGATCGGCCTCGACTACAAGAACCCGTGGATGAGCCCGTTCGAAGAGATGCAGCGCTGGAAGACGC
ATCCGGCCATCCGCGCGCACATCGAGGGCGGCAAGCGCATCGGCTATGGCGCCCGCGCGATCAACAACGGCACGCCGCAG
GCACTGCCCAGGACGGTGTTCCCGGGCGGCGCGCTGGTCGGCTGCGACGCCGGTTACCTGAACGCGGCGCGCATCAAGGG
CAGCCACGCGGCCCTCAAGAGCGGCATGCTGTGCGGCGAGGCGGTGTTCGAGGCGGTGACGGCGGGCCGCGCCGGCGATG
AGCTGTCGGCCTATCCGGCGGCGTTCGAGCAGAGCTGGCTGAAGGAGGAGCTCGACCAGACGCGCAACTTCAAGCTCTGG
TTCAAGAAGCATGGCCGCATGGTCGGCAATGTCATGACCGGCATCGAGCAGTGGCTGCTGCCCAAGGTCGGCATCAAGAC
CCCGCCCTGGACGCTGCACAGCACGGCGCCCGACAACGCCTCGCTCAAGCCGGCCGGCGAATGCCCCAAGATCGCGTATC
CGAAGCCGGACGGCAAGCTGACCTTCGACCGGTTGTCGTCGGTGTTCATCTCGAACACCAACCATGAAGAAAACCAGCCG
GCCCACCTGACGCTGAAGGACCCGACCGTCCCCACGCGCATCAACCTGACGCAGTTCGCCGGGCCGGAACAGCGCTACTG
CCCGGCCGGCGTGTACGAATTCGTCAAGAACGACGACGGCACCGAGCGCCTGCAGATCAACGCGCAGAACTGCGTGCACT
GCAAGACCTGCGACATCAAGGACCCGACGCAGAACATCGTGTGGGTCACGCCGGAAGGCGGCGGCGGCCCGAACTACGTC
GGCATGTAA

Upstream 100 bases:

>100_bases
TTCACTTGCCGCATCCGGGCGCGTCCCCGACAATGCCGGAAATTCTAATGCAGCGATCCGCTATACCAATAAGCAAACGC
CCTACAAGCGAAGAGGCATC

Downstream 100 bases:

>100_bases
GTGCCTGGCGCCCAACAAAAAAGACGGCTTCGCGCCGTCTTTTTTGTGGCCTGCGCGGATCGCCTTACGGCGCCTTGGCG
GCGATGGCCGGGGTCGCCAC

Product: electron transfer flavoprotein-ubiquinone oxidoreductase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MNQQQLLEQYGPRESMEYDVVIVGGGPAGLATAIRIKQRAAETGKDVSVVVLEKGSEPGAHILSGAVMDPRAIDELLPDC
KAQGAPLNQPVTGDDVLFLSETGATRTPDWLVPRNLHNEGCYVISLSNVVKWLATQAEGLGVEIFPGFAAAEVLYDDRGA
VRGVATGNMGVGKDGEPTDHFQLGMELLGKYTIFAEGARGHLGRQLLDKYKLDAGKDPQSFAIGIKELWEIDPAKAKPGL
VVHTAGWPMDADTFGGGFLYHLEDNKVTLGFVIGLDYKNPWMSPFEEMQRWKTHPAIRAHIEGGKRIGYGARAINNGTPQ
ALPRTVFPGGALVGCDAGYLNAARIKGSHAALKSGMLCGEAVFEAVTAGRAGDELSAYPAAFEQSWLKEELDQTRNFKLW
FKKHGRMVGNVMTGIEQWLLPKVGIKTPPWTLHSTAPDNASLKPAGECPKIAYPKPDGKLTFDRLSSVFISNTNHEENQP
AHLTLKDPTVPTRINLTQFAGPEQRYCPAGVYEFVKNDDGTERLQINAQNCVHCKTCDIKDPTQNIVWVTPEGGGGPNYV
GM

Sequences:

>Translated_562_residues
MNQQQLLEQYGPRESMEYDVVIVGGGPAGLATAIRIKQRAAETGKDVSVVVLEKGSEPGAHILSGAVMDPRAIDELLPDC
KAQGAPLNQPVTGDDVLFLSETGATRTPDWLVPRNLHNEGCYVISLSNVVKWLATQAEGLGVEIFPGFAAAEVLYDDRGA
VRGVATGNMGVGKDGEPTDHFQLGMELLGKYTIFAEGARGHLGRQLLDKYKLDAGKDPQSFAIGIKELWEIDPAKAKPGL
VVHTAGWPMDADTFGGGFLYHLEDNKVTLGFVIGLDYKNPWMSPFEEMQRWKTHPAIRAHIEGGKRIGYGARAINNGTPQ
ALPRTVFPGGALVGCDAGYLNAARIKGSHAALKSGMLCGEAVFEAVTAGRAGDELSAYPAAFEQSWLKEELDQTRNFKLW
FKKHGRMVGNVMTGIEQWLLPKVGIKTPPWTLHSTAPDNASLKPAGECPKIAYPKPDGKLTFDRLSSVFISNTNHEENQP
AHLTLKDPTVPTRINLTQFAGPEQRYCPAGVYEFVKNDDGTERLQINAQNCVHCKTCDIKDPTQNIVWVTPEGGGGPNYV
GM
>Mature_562_residues
MNQQQLLEQYGPRESMEYDVVIVGGGPAGLATAIRIKQRAAETGKDVSVVVLEKGSEPGAHILSGAVMDPRAIDELLPDC
KAQGAPLNQPVTGDDVLFLSETGATRTPDWLVPRNLHNEGCYVISLSNVVKWLATQAEGLGVEIFPGFAAAEVLYDDRGA
VRGVATGNMGVGKDGEPTDHFQLGMELLGKYTIFAEGARGHLGRQLLDKYKLDAGKDPQSFAIGIKELWEIDPAKAKPGL
VVHTAGWPMDADTFGGGFLYHLEDNKVTLGFVIGLDYKNPWMSPFEEMQRWKTHPAIRAHIEGGKRIGYGARAINNGTPQ
ALPRTVFPGGALVGCDAGYLNAARIKGSHAALKSGMLCGEAVFEAVTAGRAGDELSAYPAAFEQSWLKEELDQTRNFKLW
FKKHGRMVGNVMTGIEQWLLPKVGIKTPPWTLHSTAPDNASLKPAGECPKIAYPKPDGKLTFDRLSSVFISNTNHEENQP
AHLTLKDPTVPTRINLTQFAGPEQRYCPAGVYEFVKNDDGTERLQINAQNCVHCKTCDIKDPTQNIVWVTPEGGGGPNYV
GM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=562, Percent_Identity=52.3131672597865, Blast_Score=582, Evalue=1e-166,
Organism=Escherichia coli, GI1787991, Length=416, Percent_Identity=26.6826923076923, Blast_Score=112, Evalue=9e-26,
Organism=Escherichia coli, GI1786227, Length=330, Percent_Identity=26.6666666666667, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI87082155, Length=379, Percent_Identity=26.1213720316623, Blast_Score=86, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI25144720, Length=561, Percent_Identity=52.4064171122995, Blast_Score=581, Evalue=1e-166,
Organism=Saccharomyces cerevisiae, GI6324932, Length=590, Percent_Identity=42.8813559322034, Blast_Score=457, Evalue=1e-129,
Organism=Drosophila melanogaster, GI24652256, Length=557, Percent_Identity=54.5780969479354, Blast_Score=599, Evalue=1e-171,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60954; Mature: 60954

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQQQLLEQYGPRESMEYDVVIVGGGPAGLATAIRIKQRAAETGKDVSVVVLEKGSEPGA
CCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH
HILSGAVMDPRAIDELLPDCKAQGAPLNQPVTGDDVLFLSETGATRTPDWLVPRNLHNEG
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
CYVISLSNVVKWLATQAEGLGVEIFPGFAAAEVLYDDRGAVRGVATGNMGVGKDGEPTDH
EEEEEHHHHHHHHHHHCCCCCEEEECCCCEEHEEECCCCCEEEEEECCCCCCCCCCCCHH
FQLGMELLGKYTIFAEGARGHLGRQLLDKYKLDAGKDPQSFAIGIKELWEIDPAKAKPGL
HHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
VVHTAGWPMDADTFGGGFLYHLEDNKVTLGFVIGLDYKNPWMSPFEEMQRWKTHPAIRAH
EEEECCCCCCCCCCCCEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEE
IEGGKRIGYGARAINNGTPQALPRTVFPGGALVGCDAGYLNAARIKGSHAALKSGMLCGE
ECCCCEECCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCEEECCHHHHHHHCCHHHH
AVFEAVTAGRAGDELSAYPAAFEQSWLKEELDQTRNFKLWFKKHGRMVGNVMTGIEQWLL
HHHHHHHCCCCCCCCHHCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHC
PKVGIKTPPWTLHSTAPDNASLKPAGECPKIAYPKPDGKLTFDRLSSVFISNTNHEENQP
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHEEECCCCCCCCC
AHLTLKDPTVPTRINLTQFAGPEQRYCPAGVYEFVKNDDGTERLQINAQNCVHCKTCDIK
CEEEECCCCCCCEEEHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEEEECCCC
DPTQNIVWVTPEGGGGPNYVGM
CCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNQQQLLEQYGPRESMEYDVVIVGGGPAGLATAIRIKQRAAETGKDVSVVVLEKGSEPGA
CCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH
HILSGAVMDPRAIDELLPDCKAQGAPLNQPVTGDDVLFLSETGATRTPDWLVPRNLHNEG
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
CYVISLSNVVKWLATQAEGLGVEIFPGFAAAEVLYDDRGAVRGVATGNMGVGKDGEPTDH
EEEEEHHHHHHHHHHHCCCCCEEEECCCCEEHEEECCCCCEEEEEECCCCCCCCCCCCHH
FQLGMELLGKYTIFAEGARGHLGRQLLDKYKLDAGKDPQSFAIGIKELWEIDPAKAKPGL
HHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
VVHTAGWPMDADTFGGGFLYHLEDNKVTLGFVIGLDYKNPWMSPFEEMQRWKTHPAIRAH
EEEECCCCCCCCCCCCEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEE
IEGGKRIGYGARAINNGTPQALPRTVFPGGALVGCDAGYLNAARIKGSHAALKSGMLCGE
ECCCCEECCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCEEECCHHHHHHHCCHHHH
AVFEAVTAGRAGDELSAYPAAFEQSWLKEELDQTRNFKLWFKKHGRMVGNVMTGIEQWLL
HHHHHHHCCCCCCCCHHCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHC
PKVGIKTPPWTLHSTAPDNASLKPAGECPKIAYPKPDGKLTFDRLSSVFISNTNHEENQP
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHEEECCCCCCCCC
AHLTLKDPTVPTRINLTQFAGPEQRYCPAGVYEFVKNDDGTERLQINAQNCVHCKTCDIK
CEEEECCCCCCCEEEHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEEEECCCC
DPTQNIVWVTPEGGGGPNYVGM
CCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]