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The map label for this gene is 17546261

Identifier: 17546261

GI number: 17546261

Start: 1648310

End: 1649575

Strand: Reverse

Name: 17546261

Synonym: RSc1542

Alternate gene names: NA

Gene position: 1649575-1648310 (Counterclockwise)

Preceding gene: 17546262

Following gene: 17546260

Centisome position: 44.39

GC content: 71.72

Gene sequence:

>1266_bases
ATGCCCCCCTCCCCCAACGCCAACCCGAACCCGCCCCACCATCCGCCCACCGAAGTCCTGATCATCGGTGGCGGCGCCGC
CGGCATCGGCGTGGCCGCGAGCCTGCGCCGCCGCCGGCCGCAGTTGGACATCGCGATCATCGAGCCGAGCGATGCCCATT
ACTACCAGCCGGCCTGGACGCTGGTCGGCGGCGGCGCGTTCGACGCTGGCCGCACCGTGCGGCAGACCGATGCGCTGATC
CCGGCAGGCGTGCGCCGCATCCGCGCCAGCGCCACGCACATCGATACCGAGACCCACCGCGTGTCGCTCGATGACGGTCG
CAGCGTGCGGTACAGCCAGCTGATCGTCAGCCCCGGCCTGCGACTGGCCTGGGAGCGCATCGACGGGCTGGAGGCGGCGC
TGGGGCAGCATGGCGTCACCTCCAACTACCGCTTCGACCTCGCCCCCTACACCTGGTCGCTGGTGCGCAGCCTGCGCTCG
GGGCGCGCGCTGTTCACGCAGCCGGCCATGCCGATCAAGTGCGCCGGCGCGCCGCAGAAGGCGATGTACCTGGCCTGCGA
CCACTGGCGCCGCACCGGTGTGCTCGATCGCATCGACGTGGAGTTCAATCTGACCGGCACCACGCTGTTCGGCGTCGAAG
CCTTCGTGCCGGCGCTCATGCGCTACGTGGAGCACTACCGCGCCGGGCTGGCCTTCGGCTCCACGCTGGTGGCTGTCGAC
GGCCCGGCGCACACGGCCTGGTTCGAGCACAAGAACGCGGACGGCGAAACGGTCCGCGCTGCCAAGCGCTTCGACCTGCT
GCACGCGGTGCCGCCCCAGGTGGCGCCTGCCTTCATCGCGCAGAGCGGCCTGGGCGATGCCGCCGGCTGGTGCGAAGTCG
ACCCGGCCACACTGCAGCACGTCCGCCACGCCGATGTGTTCTCGCTCGGCGACGCCTGCTCGACACCCAACGCCAAGACC
GCGGCCGCCGTGCGCAAGCAGGCCGTGGTGGTCGCGGAAAACCTGCTCGCCCACCGCGACCGGCAACCCCTGCCGACACG
CTACGACGGCTACGGCGGCTGTCCCCTGACGGTCGAGCGCGGCAAGGTCGTCCTCGCGGAGTTCGGCTACGGCGGCAAGC
TGCTGCCGACCTTTCCGCTGGCGCCGACCGTGGCGCGCCAGTCGGCATGGTGGCTCAAGACCACCGTGCTGCCGTGGCTG
TACTGGAACGGGCTGCTCAAGGGCCGCGAGTGGCTGGCCCGCCCGAGCCTGCCGGTGGAGCGCTGA

Upstream 100 bases:

>100_bases
TTTGTGCTGCGGCATGTGGCGGTTGCCCTGGCACCCGCTGCCACCGCAGCGTTCATCGAACGGCCGGCCGGACGCCTCGG
CCACCCAACGCCAACCCGCT

Downstream 100 bases:

>100_bases
GCCGTGCCGCTCTACGAAGCCGGCTGGCTCGCCAGCGCGGGGCTGGGCTCCGTGGTCGGACTGATCCTCGCGCTGACGGG
CGCCGGGGGCGCCATCGTGG

Product: transmembrane protein

Products: NA

Alternate protein names: Sulfide Dehydrogenase Flavoprotein Subunit; Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; SulfideQuinone Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Twin-Arginine Translocation Pathway Signal; Sulfide Dehydrogenase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide-Quinone Reductase; Sulfide Quinone Oxidoreductase-Like Protein; Flavoprotein Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase; Anti-Anti-Sigma Regulatory Factor; Filamentous Hemagglutinin; NAD(Fad)-Dependent Dehydrogenase Protein; Oxidoreductase Family Protein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Oxidoreductase Pyridine Nucleotide-Disulphide Family; Pyridine Nucleotide-Disulphide Oxidoreductase Class-II; Sulfide-Quinone Oxidoreductase; NADH Dehydrogenase FAD-Containing Subunit; Sulfide Quinone-Rductase; Sulphide Quinone Reductase; Flavoprotein Reductase Conjectural; Oxidoreductase FAD-Dependent; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; SulfideQuinone Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family; NAD(FAD)-Dependent Dehydrogenase-Like Protein; Sulfide Dehydrogenase Related Protein

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MPPSPNANPNPPHHPPTEVLIIGGGAAGIGVAASLRRRRPQLDIAIIEPSDAHYYQPAWTLVGGGAFDAGRTVRQTDALI
PAGVRRIRASATHIDTETHRVSLDDGRSVRYSQLIVSPGLRLAWERIDGLEAALGQHGVTSNYRFDLAPYTWSLVRSLRS
GRALFTQPAMPIKCAGAPQKAMYLACDHWRRTGVLDRIDVEFNLTGTTLFGVEAFVPALMRYVEHYRAGLAFGSTLVAVD
GPAHTAWFEHKNADGETVRAAKRFDLLHAVPPQVAPAFIAQSGLGDAAGWCEVDPATLQHVRHADVFSLGDACSTPNAKT
AAAVRKQAVVVAENLLAHRDRQPLPTRYDGYGGCPLTVERGKVVLAEFGYGGKLLPTFPLAPTVARQSAWWLKTTVLPWL
YWNGLLKGREWLARPSLPVER

Sequences:

>Translated_421_residues
MPPSPNANPNPPHHPPTEVLIIGGGAAGIGVAASLRRRRPQLDIAIIEPSDAHYYQPAWTLVGGGAFDAGRTVRQTDALI
PAGVRRIRASATHIDTETHRVSLDDGRSVRYSQLIVSPGLRLAWERIDGLEAALGQHGVTSNYRFDLAPYTWSLVRSLRS
GRALFTQPAMPIKCAGAPQKAMYLACDHWRRTGVLDRIDVEFNLTGTTLFGVEAFVPALMRYVEHYRAGLAFGSTLVAVD
GPAHTAWFEHKNADGETVRAAKRFDLLHAVPPQVAPAFIAQSGLGDAAGWCEVDPATLQHVRHADVFSLGDACSTPNAKT
AAAVRKQAVVVAENLLAHRDRQPLPTRYDGYGGCPLTVERGKVVLAEFGYGGKLLPTFPLAPTVARQSAWWLKTTVLPWL
YWNGLLKGREWLARPSLPVER
>Mature_420_residues
PPSPNANPNPPHHPPTEVLIIGGGAAGIGVAASLRRRRPQLDIAIIEPSDAHYYQPAWTLVGGGAFDAGRTVRQTDALIP
AGVRRIRASATHIDTETHRVSLDDGRSVRYSQLIVSPGLRLAWERIDGLEAALGQHGVTSNYRFDLAPYTWSLVRSLRSG
RALFTQPAMPIKCAGAPQKAMYLACDHWRRTGVLDRIDVEFNLTGTTLFGVEAFVPALMRYVEHYRAGLAFGSTLVAVDG
PAHTAWFEHKNADGETVRAAKRFDLLHAVPPQVAPAFIAQSGLGDAAGWCEVDPATLQHVRHADVFSLGDACSTPNAKTA
AAVRKQAVVVAENLLAHRDRQPLPTRYDGYGGCPLTVERGKVVLAEFGYGGKLLPTFPLAPTVARQSAWWLKTTVLPWLY
WNGLLKGREWLARPSLPVER

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=391, Percent_Identity=37.0843989769821, Blast_Score=289, Evalue=4e-78,
Organism=Caenorhabditis elegans, GI17539680, Length=429, Percent_Identity=30.5361305361305, Blast_Score=197, Evalue=9e-51,
Organism=Caenorhabditis elegans, GI115534373, Length=346, Percent_Identity=34.1040462427746, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI24657386, Length=382, Percent_Identity=33.7696335078534, Blast_Score=239, Evalue=3e-63,
Organism=Drosophila melanogaster, GI24657391, Length=382, Percent_Identity=33.7696335078534, Blast_Score=239, Evalue=3e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45852; Mature: 45721

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSPNANPNPPHHPPTEVLIIGGGAAGIGVAASLRRRRPQLDIAIIEPSDAHYYQPAWT
CCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEECCEEE
LVGGGAFDAGRTVRQTDALIPAGVRRIRASATHIDTETHRVSLDDGRSVRYSQLIVSPGL
EEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHEECCCCEEEECCCCCCEEEEHEEECCCH
RLAWERIDGLEAALGQHGVTSNYRFDLAPYTWSLVRSLRSGRALFTQPAMPIKCAGAPQK
HHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHCCCEEEECCCCCEEECCCCCC
AMYLACDHWRRTGVLDRIDVEFNLTGTTLFGVEAFVPALMRYVEHYRAGLAFGSTLVAVD
EEEEEHHHHHHCCCCEEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
GPAHTAWFEHKNADGETVRAAKRFDLLHAVPPQVAPAFIAQSGLGDAAGWCEVDPATLQH
CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
VRHADVFSLGDACSTPNAKTAAAVRKQAVVVAENLLAHRDRQPLPTRYDGYGGCPLTVER
HHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
GKVVLAEFGYGGKLLPTFPLAPTVARQSAWWLKTTVLPWLYWNGLLKGREWLARPSLPVE
CEEEEEECCCCCEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCC
R
C
>Mature Secondary Structure 
PPSPNANPNPPHHPPTEVLIIGGGAAGIGVAASLRRRRPQLDIAIIEPSDAHYYQPAWT
CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEECCEEE
LVGGGAFDAGRTVRQTDALIPAGVRRIRASATHIDTETHRVSLDDGRSVRYSQLIVSPGL
EEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHEECCCCEEEECCCCCCEEEEHEEECCCH
RLAWERIDGLEAALGQHGVTSNYRFDLAPYTWSLVRSLRSGRALFTQPAMPIKCAGAPQK
HHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHCCCEEEECCCCCEEECCCCCC
AMYLACDHWRRTGVLDRIDVEFNLTGTTLFGVEAFVPALMRYVEHYRAGLAFGSTLVAVD
EEEEEHHHHHHCCCCEEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
GPAHTAWFEHKNADGETVRAAKRFDLLHAVPPQVAPAFIAQSGLGDAAGWCEVDPATLQH
CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
VRHADVFSLGDACSTPNAKTAAAVRKQAVVVAENLLAHRDRQPLPTRYDGYGGCPLTVER
HHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
GKVVLAEFGYGGKLLPTFPLAPTVARQSAWWLKTTVLPWLYWNGLLKGREWLARPSLPVE
CEEEEEECCCCCEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA