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The map label for this gene is 17546260

Identifier: 17546260

GI number: 17546260

Start: 1647485

End: 1648306

Strand: Reverse

Name: 17546260

Synonym: RSc1541

Alternate gene names: NA

Gene position: 1648306-1647485 (Counterclockwise)

Preceding gene: 17546261

Following gene: 17546259

Centisome position: 44.35

GC content: 73.6

Gene sequence:

>822_bases
GTGCCGCTCTACGAAGCCGGCTGGCTCGCCAGCGCGGGGCTGGGCTCCGTGGTCGGACTGATCCTCGCGCTGACGGGCGC
CGGGGGCGCCATCGTGGCGGTGCCGCTGCTGATCTTCGGCCTGCACCTGTCGGTCTCGCAGGCGGCGCCGGTGGCGCTGC
TGGCTGTCGGCCTGTCCGCCGGGCTGGGTTCGGTGCTGGGGCTGCGCGAGGGCAAGGTCCGCTACAAGGCCGCCGCGCTG
ATGGCGCTGTGCGGCGTGGCGCTGTCGCCGCTGGGCGTCTGGGCCGCGCATCGCGTGCCGAATACGCCGTTGACCGTGCT
GTTTGCCATGGTGCTCGCCCATGTGGCAATCCGCATGTTCCTGCAGGCGCGCGCAACGGCCCCTGCCGCGCCATCGCCAC
GCCATGCCGCCCCGCCCTGCCACCTGGACACCGTCCGCGGCAAGCTGATCTGGACCCTGCCGTGCGCGCGCACGCTGGCA
TCCTGGGGCGCGGCGGCCGGCCTCCTGTCCGGGCTGCTCGGCGTCGGCGGCGGCTTCGTCATCGTGCCGGCATTGCGCCG
CGCAACCGACCTGCCGATGCAAACCATCGTGGCCACATCCCTCGCGGTGATCGCCCTCGTCTCGGTCGGCGGCGTGCTCG
CCTCGGCCATCGGCGGGCATGTTGACTGGCACATCGCCCTGCCGTTCGCCGCCGGCGCATTGGCGGGCATGCTGACCGGG
CGCGGCTTCTCGCGCCATCTGGCGGGGCCGGCGCTGCAGCAGGGTTTCGCGGCGTTTGCCGGCGTGGTGGCGATCGGACT
GGTTGTGCGGGCGCTGGCCTGA

Upstream 100 bases:

>100_bases
GTGGCTCAAGACCACCGTGCTGCCGTGGCTGTACTGGAACGGGCTGCTCAAGGGCCGCGAGTGGCTGGCCCGCCCGAGCC
TGCCGGTGGAGCGCTGAGCC

Downstream 100 bases:

>100_bases
CCTGCCGTGCCCCACCGGCCACGCCTCTGGCGCAATGGCGTCCCAGATCGCGATCACGGATGCCGCCAGCCCGCCCCCCT
CCTGGCTGGACTCGCAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MPLYEAGWLASAGLGSVVGLILALTGAGGAIVAVPLLIFGLHLSVSQAAPVALLAVGLSAGLGSVLGLREGKVRYKAAAL
MALCGVALSPLGVWAAHRVPNTPLTVLFAMVLAHVAIRMFLQARATAPAAPSPRHAAPPCHLDTVRGKLIWTLPCARTLA
SWGAAAGLLSGLLGVGGGFVIVPALRRATDLPMQTIVATSLAVIALVSVGGVLASAIGGHVDWHIALPFAAGALAGMLTG
RGFSRHLAGPALQQGFAAFAGVVAIGLVVRALA

Sequences:

>Translated_273_residues
MPLYEAGWLASAGLGSVVGLILALTGAGGAIVAVPLLIFGLHLSVSQAAPVALLAVGLSAGLGSVLGLREGKVRYKAAAL
MALCGVALSPLGVWAAHRVPNTPLTVLFAMVLAHVAIRMFLQARATAPAAPSPRHAAPPCHLDTVRGKLIWTLPCARTLA
SWGAAAGLLSGLLGVGGGFVIVPALRRATDLPMQTIVATSLAVIALVSVGGVLASAIGGHVDWHIALPFAAGALAGMLTG
RGFSRHLAGPALQQGFAAFAGVVAIGLVVRALA
>Mature_272_residues
PLYEAGWLASAGLGSVVGLILALTGAGGAIVAVPLLIFGLHLSVSQAAPVALLAVGLSAGLGSVLGLREGKVRYKAAALM
ALCGVALSPLGVWAAHRVPNTPLTVLFAMVLAHVAIRMFLQARATAPAAPSPRHAAPPCHLDTVRGKLIWTLPCARTLAS
WGAAAGLLSGLLGVGGGFVIVPALRRATDLPMQTIVATSLAVIALVSVGGVLASAIGGHVDWHIALPFAAGALAGMLTGR
GFSRHLAGPALQQGFAAFAGVVAIGLVVRALA

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27239; Mature: 27108

Theoretical pI: Translated: 11.83; Mature: 11.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLYEAGWLASAGLGSVVGLILALTGAGGAIVAVPLLIFGLHLSVSQAAPVALLAVGLSA
CCCCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GLGSVLGLREGKVRYKAAALMALCGVALSPLGVWAAHRVPNTPLTVLFAMVLAHVAIRMF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LQARATAPAAPSPRHAAPPCHLDTVRGKLIWTLPCARTLASWGAAAGLLSGLLGVGGGFV
HHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCE
IVPALRRATDLPMQTIVATSLAVIALVSVGGVLASAIGGHVDWHIALPFAAGALAGMLTG
EHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHC
RGFSRHLAGPALQQGFAAFAGVVAIGLVVRALA
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PLYEAGWLASAGLGSVVGLILALTGAGGAIVAVPLLIFGLHLSVSQAAPVALLAVGLSA
CCCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GLGSVLGLREGKVRYKAAALMALCGVALSPLGVWAAHRVPNTPLTVLFAMVLAHVAIRMF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LQARATAPAAPSPRHAAPPCHLDTVRGKLIWTLPCARTLASWGAAAGLLSGLLGVGGGFV
HHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCE
IVPALRRATDLPMQTIVATSLAVIALVSVGGVLASAIGGHVDWHIALPFAAGALAGMLTG
EHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHC
RGFSRHLAGPALQQGFAAFAGVVAIGLVVRALA
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA