| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is pstC [H]
Identifier: 17546249
GI number: 17546249
Start: 1634470
End: 1635435
Strand: Direct
Name: pstC [H]
Synonym: RSc1530
Alternate gene names: 17546249
Gene position: 1634470-1635435 (Clockwise)
Preceding gene: 17546248
Following gene: 17546250
Centisome position: 43.98
GC content: 65.42
Gene sequence:
>966_bases ATGGCTACGCTCTCCGACTCTTCCGGCGTCCGCGCTCCAAGCCGCATCGGCGATCTGCTGTTCGGCGGGCTGACCCGGTT TGCTGCGCTCGTTACGCTGCTGCTGCTGGGCGGCATCATCGTTTCGCTGATCATCAGCGCCTGGCCCTCGATCCAGCAGT TCGGCACGTCGTTCCTGTGGAAGGCCGAGTGGGATCCGCCCGCCGATCAGTTCGGTGCGCTGGTGCCGATCTACGGCACC CTCGTGACGTCGCTGATTGCCCTGATTATTGCGGTGCCGGTGAGTTTCGGCATCGCCCTGTTTCTGACTGAGCTTTCGCC GGCCTGGCTGCGCCGGCCGCTCGGTACCGCCATCGAGCTGCTCGCTGCCGTGCCGTCCATCGTGTACGGCATGTGGGGCC TGCTCGTGTTCGCGCCGATCTTCGGCGAGTATTTCCAGAAGCCGCTGGCCGCCACCGTGGGCAGGATCCCGTTTGTCGGG GCGCTGTTCCAGGGCGCGCCGATCGGCATCGGCCTGCTGTGCGCCGGGGTCATCCTGGCGATCATGATCATCCCGTACAT CTCGGCCGTGATGCGCGACGTGTTCGAGGTCACGCCCGTGCTGCTCAAGGAGTCCGCCTACGGCGTCGGCTGCACCACGT GGGAGGTGATGTGGAACGTGGTCCTGCCATACACCAAGGCCGGTGTGATCGGCGGCGTGATGCTGGGCCTGGGCCGCGCG CTGGGCGAGACCATGGCCGTCACCTTCGTGATCGGCAACACCAACCTGCTGGACAACGTTTCACTGTTTTCGCCGGGCAA CAGCATCACGTCGGCGCTGGCCAATGAGTTCGCGGAAGCCGGGCAGGGGCTGCACACCGCCGCGCTGATGGAGCTGGGCC TGATCCTGTTCGTCATCACGTTCTTCGTGCTCGCGGCGTCCAAGCTGTTGCTGCTGCGCCTGCAGAAAGGCGAGGGTCAC AAGTGA
Upstream 100 bases:
>100_bases CAAGCCGATCTACAACTGATCGCTGCTGTGTAGCGGGTGCGGGCGGTGTTTGTCGCCCGCACCTCTTGAAAGCTCTTTAG ACGGCTGACCGGTTTCCATC
Downstream 100 bases:
>100_bases ACCAACGCCTGTCGCCCGACGCCATGACATCCAATACCATGCGCACGCCCTCCATCCCGGCCGTCCGCGCCGACTCGGAA AAGATCAAGTCGCGCCTGCA
Product: phosphate transporter permease subunit PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MATLSDSSGVRAPSRIGDLLFGGLTRFAALVTLLLLGGIIVSLIISAWPSIQQFGTSFLWKAEWDPPADQFGALVPIYGT LVTSLIALIIAVPVSFGIALFLTELSPAWLRRPLGTAIELLAAVPSIVYGMWGLLVFAPIFGEYFQKPLAATVGRIPFVG ALFQGAPIGIGLLCAGVILAIMIIPYISAVMRDVFEVTPVLLKESAYGVGCTTWEVMWNVVLPYTKAGVIGGVMLGLGRA LGETMAVTFVIGNTNLLDNVSLFSPGNSITSALANEFAEAGQGLHTAALMELGLILFVITFFVLAASKLLLLRLQKGEGH K
Sequences:
>Translated_321_residues MATLSDSSGVRAPSRIGDLLFGGLTRFAALVTLLLLGGIIVSLIISAWPSIQQFGTSFLWKAEWDPPADQFGALVPIYGT LVTSLIALIIAVPVSFGIALFLTELSPAWLRRPLGTAIELLAAVPSIVYGMWGLLVFAPIFGEYFQKPLAATVGRIPFVG ALFQGAPIGIGLLCAGVILAIMIIPYISAVMRDVFEVTPVLLKESAYGVGCTTWEVMWNVVLPYTKAGVIGGVMLGLGRA LGETMAVTFVIGNTNLLDNVSLFSPGNSITSALANEFAEAGQGLHTAALMELGLILFVITFFVLAASKLLLLRLQKGEGH K >Mature_320_residues ATLSDSSGVRAPSRIGDLLFGGLTRFAALVTLLLLGGIIVSLIISAWPSIQQFGTSFLWKAEWDPPADQFGALVPIYGTL VTSLIALIIAVPVSFGIALFLTELSPAWLRRPLGTAIELLAAVPSIVYGMWGLLVFAPIFGEYFQKPLAATVGRIPFVGA LFQGAPIGIGLLCAGVILAIMIIPYISAVMRDVFEVTPVLLKESAYGVGCTTWEVMWNVVLPYTKAGVIGGVMLGLGRAL GETMAVTFVIGNTNLLDNVSLFSPGNSITSALANEFAEAGQGLHTAALMELGLILFVITFFVLAASKLLLLRLQKGEGHK
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=309, Percent_Identity=74.1100323624595, Blast_Score=464, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33952; Mature: 33821
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLSDSSGVRAPSRIGDLLFGGLTRFAALVTLLLLGGIIVSLIISAWPSIQQFGTSFLW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEE KAEWDPPADQFGALVPIYGTLVTSLIALIIAVPVSFGIALFLTELSPAWLRRPLGTAIEL ECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LAAVPSIVYGMWGLLVFAPIFGEYFQKPLAATVGRIPFVGALFQGAPIGIGLLCAGVILA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHH IMIIPYISAVMRDVFEVTPVLLKESAYGVGCTTWEVMWNVVLPYTKAGVIGGVMLGLGRA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGETMAVTFVIGNTNLLDNVSLFSPGNSITSALANEFAEAGQGLHTAALMELGLILFVIT HHHHHEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FFVLAASKLLLLRLQKGEGHK HHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ATLSDSSGVRAPSRIGDLLFGGLTRFAALVTLLLLGGIIVSLIISAWPSIQQFGTSFLW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEE KAEWDPPADQFGALVPIYGTLVTSLIALIIAVPVSFGIALFLTELSPAWLRRPLGTAIEL ECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LAAVPSIVYGMWGLLVFAPIFGEYFQKPLAATVGRIPFVGALFQGAPIGIGLLCAGVILA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHH IMIIPYISAVMRDVFEVTPVLLKESAYGVGCTTWEVMWNVVLPYTKAGVIGGVMLGLGRA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGETMAVTFVIGNTNLLDNVSLFSPGNSITSALANEFAEAGQGLHTAALMELGLILFVIT HHHHHEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FFVLAASKLLLLRLQKGEGHK HHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]