| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is gloB [H]
Identifier: 17546234
GI number: 17546234
Start: 1616227
End: 1617081
Strand: Direct
Name: gloB [H]
Synonym: RSc1515
Alternate gene names: 17546234
Gene position: 1616227-1617081 (Clockwise)
Preceding gene: 17546230
Following gene: 17546235
Centisome position: 43.49
GC content: 69.36
Gene sequence:
>855_bases ATGCGACGATCGGAAGAGGAGTCGGGCATGGTCCAGGGTGGTGTGCCGCTTGCCGTGGAGGCGATCGCTGCGTTTACCGA CAATTATATTTGGGCACTTCACGATGGCCGCGTGGCCGCCGTGGTCGATCCCGGCGACGCGCAACCGGTGCTCCGCTTCC TGCAGGCGCGCGGTCTGGCACTCGGTGCCATTGTAATCACACATCATCACGGCGATCACGTCGGCGGCGTGCAGGCGCTG GTCGAGGCCTATCCGCGCGACCCGTCCGGCGCGCCGTTGCCGGTGATCGGCCCGGCGGACGAGTCGATTCCCTGCCGCAC GCAGGCTGTGCGCGAGGGCGACACCGTGACCCTCTCGCATCCCGCCGCCACCTTCCACGTGCTCGATGTGCCCGGCCATA CGCGTGGCCATGTCGCCTATGTCGGCCGCCTGCAGGGGCCGGATGCGCCCGCCAGCCTGTTCTGCGGCGATACGCTGTTC GCCACCGGCTGCGGCCGCCTGTTCGAGGGCACGCCCGCGCAGATGCGGCTGTCGCTGTCCAAGCTGGCCGCGCTGCCGCC CGACACGCGCGTGTACTGCGCACACGAATACACCGCCGCGAATGTGCGTTTCGCGCGCGCGGTCGAACCGGGCAACGCCG CGCTGGCGGCATGGGAAGACGAAGTCGCCTCGCTGCGCACCGACGGGCGCGCGACCGTGCCGACCACGGTCGGCCACGAG CGCGCGACCAATCCCTTCATGCGATCGAACGAGCCCGCCGTGGCGGCCTCGGTGGCGCAGCATGCCGGTATCGGAGTCGA CGATCCGGTGGCCGTTTTCGCGGCGCTGCGCGAATGGAAAAACGGATTTCGCTGA
Upstream 100 bases:
>100_bases GAAGCCGAACATGTCGGCGACGGTGCGGTCGAATTGGGCCTGTTCCCAACGCAGGACGTATTGCCCGGGCGGCGAAGCAA GCCAGTGATGCCAATCTATA
Downstream 100 bases:
>100_bases GCCGGCGCGCCAAAAGGTGCGCTAGGCGACGCTTTTTCCCGGCGTGAACGGTCCCATGCCGGGTGAAAGCGGGTTGACGC GGCGGAATGCCTTCCATACC
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MRRSEEESGMVQGGVPLAVEAIAAFTDNYIWALHDGRVAAVVDPGDAQPVLRFLQARGLALGAIVITHHHGDHVGGVQAL VEAYPRDPSGAPLPVIGPADESIPCRTQAVREGDTVTLSHPAATFHVLDVPGHTRGHVAYVGRLQGPDAPASLFCGDTLF ATGCGRLFEGTPAQMRLSLSKLAALPPDTRVYCAHEYTAANVRFARAVEPGNAALAAWEDEVASLRTDGRATVPTTVGHE RATNPFMRSNEPAVAASVAQHAGIGVDDPVAVFAALREWKNGFR
Sequences:
>Translated_284_residues MRRSEEESGMVQGGVPLAVEAIAAFTDNYIWALHDGRVAAVVDPGDAQPVLRFLQARGLALGAIVITHHHGDHVGGVQAL VEAYPRDPSGAPLPVIGPADESIPCRTQAVREGDTVTLSHPAATFHVLDVPGHTRGHVAYVGRLQGPDAPASLFCGDTLF ATGCGRLFEGTPAQMRLSLSKLAALPPDTRVYCAHEYTAANVRFARAVEPGNAALAAWEDEVASLRTDGRATVPTTVGHE RATNPFMRSNEPAVAASVAQHAGIGVDDPVAVFAALREWKNGFR >Mature_284_residues MRRSEEESGMVQGGVPLAVEAIAAFTDNYIWALHDGRVAAVVDPGDAQPVLRFLQARGLALGAIVITHHHGDHVGGVQAL VEAYPRDPSGAPLPVIGPADESIPCRTQAVREGDTVTLSHPAATFHVLDVPGHTRGHVAYVGRLQGPDAPASLFCGDTLF ATGCGRLFEGTPAQMRLSLSKLAALPPDTRVYCAHEYTAANVRFARAVEPGNAALAAWEDEVASLRTDGRATVPTTVGHE RATNPFMRSNEPAVAASVAQHAGIGVDDPVAVFAALREWKNGFR
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=274, Percent_Identity=40.8759124087591, Blast_Score=178, Evalue=4e-45, Organism=Homo sapiens, GI94538322, Length=274, Percent_Identity=40.8759124087591, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI14150041, Length=241, Percent_Identity=37.344398340249, Blast_Score=137, Evalue=8e-33, Organism=Homo sapiens, GI116642887, Length=266, Percent_Identity=33.8345864661654, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI21703352, Length=264, Percent_Identity=34.0909090909091, Blast_Score=135, Evalue=4e-32, Organism=Homo sapiens, GI46361987, Length=199, Percent_Identity=37.6884422110553, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI1786406, Length=270, Percent_Identity=41.8518518518518, Blast_Score=189, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17536925, Length=273, Percent_Identity=35.1648351648352, Blast_Score=151, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6320478, Length=272, Percent_Identity=30.1470588235294, Blast_Score=101, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6324614, Length=266, Percent_Identity=31.203007518797, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI24667711, Length=273, Percent_Identity=39.1941391941392, Blast_Score=185, Evalue=2e-47, Organism=Drosophila melanogaster, GI21356335, Length=273, Percent_Identity=39.1941391941392, Blast_Score=185, Evalue=3e-47, Organism=Drosophila melanogaster, GI24667703, Length=273, Percent_Identity=39.1941391941392, Blast_Score=184, Evalue=5e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 29970; Mature: 29970
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSEEESGMVQGGVPLAVEAIAAFTDNYIWALHDGRVAAVVDPGDAQPVLRFLQARGLA CCCCCCCCCEEECCCCHHHHHHHHHCCCEEEEEECCEEEEEECCCCHHHHHHHHHHCCCE LGAIVITHHHGDHVGGVQALVEAYPRDPSGAPLPVIGPADESIPCRTQAVREGDTVTLSH EEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHCCCCEEEEEC PAATFHVLDVPGHTRGHVAYVGRLQGPDAPASLFCGDTLFATGCGRLFEGTPAQMRLSLS CCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEECCHHHHHCCCHHHCCCCHHHHHHHH KLAALPPDTRVYCAHEYTAANVRFARAVEPGNAALAAWEDEVASLRTDGRATVPTTVGHE HHHCCCCCCEEEEEECEEECCEEEEEEECCCCCEEEEHHHHHHHHHCCCCEECCCCCCCC RATNPFMRSNEPAVAASVAQHAGIGVDDPVAVFAALREWKNGFR CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MRRSEEESGMVQGGVPLAVEAIAAFTDNYIWALHDGRVAAVVDPGDAQPVLRFLQARGLA CCCCCCCCCEEECCCCHHHHHHHHHCCCEEEEEECCEEEEEECCCCHHHHHHHHHHCCCE LGAIVITHHHGDHVGGVQALVEAYPRDPSGAPLPVIGPADESIPCRTQAVREGDTVTLSH EEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHCCCCEEEEEC PAATFHVLDVPGHTRGHVAYVGRLQGPDAPASLFCGDTLFATGCGRLFEGTPAQMRLSLS CCEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEECCHHHHHCCCHHHCCCCHHHHHHHH KLAALPPDTRVYCAHEYTAANVRFARAVEPGNAALAAWEDEVASLRTDGRATVPTTVGHE HHHCCCCCCEEEEEECEEECCEEEEEEECCCCCEEEEHHHHHHHHHCCCCEECCCCCCCC RATNPFMRSNEPAVAASVAQHAGIGVDDPVAVFAALREWKNGFR CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA