Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

Click here to switch to the map view.

The map label for this gene is 17546229

Identifier: 17546229

GI number: 17546229

Start: 1613570

End: 1613788

Strand: Direct

Name: 17546229

Synonym: RSc1510

Alternate gene names: NA

Gene position: 1613570-1613788 (Clockwise)

Preceding gene: 17546228

Following gene: 17546230

Centisome position: 43.42

GC content: 67.58

Gene sequence:

>219_bases
GTGTGCGTGATGGCGGCGCGCGGCGCCTTCAATGCGATCGAGGAAATCGCGGGGCTGACGTCGACCCTGCTCGCGCCGGT
GCTTGCGCTGCTGCAGCGTGACGTTGCGAGCGGGTTGTCGCAAGATGAGATCAGCGGATTCATTCATCAGGTCAGGGTGA
CGGCGTCCCGGGATGCTTCGCGTCGGCGGGCCGCGTGGCTGTCGCCGTCGGAGGCGTGA

Upstream 100 bases:

>100_bases
AACAGGTGATCGTGATCGCACCCGTGTGGGCGGGGCGGCTGGCTTCGCCGATGCGCATCTTCCTGGCCGATCGACTGCCG
TTTCCGGTGAGGCTTCCGCG

Downstream 100 bases:

>100_bases
CCCGCCGGCGGCCGGCCTGACGGCACAATCGACGAGCAAGGAGAGTGGCCATGGCCCAGTTGACCGAAGCACAGCAGCAT
CAACTGATCGCGCTGCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MCVMAARGAFNAIEEIAGLTSTLLAPVLALLQRDVASGLSQDEISGFIHQVRVTASRDASRRRAAWLSPSEA

Sequences:

>Translated_72_residues
MCVMAARGAFNAIEEIAGLTSTLLAPVLALLQRDVASGLSQDEISGFIHQVRVTASRDASRRRAAWLSPSEA
>Mature_72_residues
MCVMAARGAFNAIEEIAGLTSTLLAPVLALLQRDVASGLSQDEISGFIHQVRVTASRDASRRRAAWLSPSEA

Specific function: Unknown

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7655; Mature: 7655

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCVMAARGAFNAIEEIAGLTSTLLAPVLALLQRDVASGLSQDEISGFIHQVRVTASRDAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHH
RRRAAWLSPSEA
HHHHHCCCCCCC
>Mature Secondary Structure
MCVMAARGAFNAIEEIAGLTSTLLAPVLALLQRDVASGLSQDEISGFIHQVRVTASRDAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHH
RRRAAWLSPSEA
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA