| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546210
Identifier: 17546210
GI number: 17546210
Start: 1593220
End: 1595526
Strand: Direct
Name: 17546210
Synonym: RSc1491
Alternate gene names: NA
Gene position: 1593220-1595526 (Clockwise)
Preceding gene: 17546208
Following gene: 17546213
Centisome position: 42.87
GC content: 63.85
Gene sequence:
>2307_bases ATGTTTGACGCCTACAAGATCGGTGTCACGCTCAGTCTAGTCGATCACGCCACGCCGTCCATAGGCAGGATCATGCGCGG CCTGGCGGCGACCGAGGCTGAAGCCGCGAAGCTGCAGAAGCGCTTGGACGGGATCAGGGCAGGCTTTGTCGGAGGGGTGG CATCGATCGCGGCCGGCTTGGCACTGGCAGCCCCCTTCAAGACGGGCATCGAGCACGCCGAGAAGTTCGAGCGGGCCCTG CTGCGCCTGAAGAATATTGGCGGCATCGAGCCTGCAGTGGTCGCTCGGATTCGAGCGGATGCGCTGGCGGGGAAATACCC ATCGATGAGTGCCACCGAGACGGTGGACAGCTTCCGGGATCTGCACACTGCCTTCGGTGATGCGGCGCACGCCATGCAGT TCATGCCCCAGTTCGCCAAGGCCAACGCGGTCAGCAAGTGGGTCTACGGCAAGTCGGCTGTTCAGGGCGAGCGGGAAACC CTGGCGCTGGCCCAGGTGGCTGAGCGCTTGGGCGGCTCCAACTCGCCCGAGGCGATGGGCCGCGCCATCGACCTGGTGGC ACGGATCCGCGCCGGCACCGGCGGTAATCTCGGCGCGCTGGATTTGCGGGCCTTCGCCAGCACCATGGGCGCGAACTTTG CCATGATGAGCAATGAAGGTATTGCAAAGCTGACGGCATACTCCACTGAGGTGGGGGCGTCCAAGGCCGGGACGGCCACC AACAGCCTGCTGCAGAACTTCCTCTTTGGCCGCGGCACCGAGGCCTCCGGCTTCTGGATGCACAAGTATGGGCTCGTCGA CGAAACCGTGAACGAGCGCAATCTGCGGGCCACGTATGGCGACAAATGGCAGGCGCACCGAAACAAGGTGACGGCCGGCG CGGCCATTGGGTCCGACCTCCTGCAGAAGGACGTGCCGGGTTGGGTGCAGCGGTACGCGCTGCCCGCGTTGATGGCACAT GGCATCACCAAGCCCGAGGATCTGGCCAAGTTCGCCTCCTACATGGCGTCCAACCGCAAGGGCGCCGAGGCGCTGTCGAC GTTCCTGACGCAATTGCCGCGCGTCCTGAAGGACTTTCACCTGGTCGAGGCGTCCAAGGGCATCGACGAGCAATTCGAGG CGGTGAAGGACAGCCCTGTTGCGAAGATCGATACGCTCAAGGCGCGCTGGGAGACGGCCCTGACCAACTTGGGGGAGGGA GCTCTGCCAGTGGTGGTGCCATTGGCGGAAAAGCTGGGTAGTGCGCTGAAGCGCTTCAATGAGTACGCCGAGAAGAACCC TGGGACGATCGAGCGCATGACCGATGGTTTCATCGACCTGTCCGCTGTGCTGATTGGCGGAGGCGTGATTTCAATGCTCG ACAGCTCTGTCCACAGCTTCAAACTGCTCAAGGACGTGCTGTTCCCGGTGTCCCGTGGCTTGGGCGGCGCCGCCGAGGCG ACATCTGCGCTGTCCAAGGCGATCGCCATGAAAGAGGTCGGCGGGGTGGTCGGGATTGGCCGCATCGCGGCGGCACTTGG TCCGGTTGGCCTCGCTGGCGCGCTTATTGCCCTGGGCGCTGGCGCCATTGCCCTGATCGACAAGATCACCGAAGCGAACG CCGGCAAGAACAAGCCGCACGGGCGTGGCTTCCTGCCCGACGAACCGGAAAAGCCTAAGACGATGATGGTTCCGCTCGGA CATCGTGGGCGCGGCATCGTCTACGCCGAGGTGCCGGTGCCCTCGTACTCCAACGAGGGGCACAACCGCAGCGTCGCTCC GCCGGCCGGGCGCTCCGCAGATGGTCCAGGTGCACACGCAGATCAACGCCGACGGCAGGAAGATTGCGGATGTGGTGACG CGGCACCAAGCACGGGAGATGAGTCGCCCGCAGACCGGTCCCAGCGGGTTCGACCCCCGCATGGCTCTGCCACCGCCATC ACTGAAATAACCGCGGAGAGAGATATGAGACTTGTCACGATGAAGCAGTGGGATGCCTTCACTGCGCTGACGAACGAAAT CCACGAGGCTATGGCGCAGATGGGCCCCATCGCGCAAGGGCTCGCGGTCCTTGTGGCGAACAGCGACCCGACAGATCCGG CCCAAGTGAGCATCCCCATCAATGCCATGCGAGCCGGCGCGGAGATGAAGAAACGAGCAGAAGAACTGCTTGAGCGATTC GAGGTGATGGCGAAGATCTGTACCGGGGAGAGGCGCCAAGCCGGCGAGTCGCTGATGGAGTTCTTTGAGCGCTTCGCAGC AATGGATGAGGTCGCAATCCTTGGCGCGATGTCGAGGAACGGTGTGCGTCTGGTTGGGCGTGGGTGA
Upstream 100 bases:
>100_bases TGTCAATGATGTCGGACTCCCTCACCGGGCGGCGTGCTCTGGTTCTTCCTGCGCTCACTGAACTTTTCATCACGTCCCCC GTTGGGGTGGGAGAGTAAGC
Downstream 100 bases:
>100_bases CTGGCGGATCGGTTATGTCGTTGCGCGAGCGCGAGCAACAATCAGACGAGCCGCGCTCGGAAGTGCAAATGCGAAGACCG CTACTTCGATTTCGGCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 768; Mature: 768
Protein sequence:
>768_residues MFDAYKIGVTLSLVDHATPSIGRIMRGLAATEAEAAKLQKRLDGIRAGFVGGVASIAAGLALAAPFKTGIEHAEKFERAL LRLKNIGGIEPAVVARIRADALAGKYPSMSATETVDSFRDLHTAFGDAAHAMQFMPQFAKANAVSKWVYGKSAVQGERET LALAQVAERLGGSNSPEAMGRAIDLVARIRAGTGGNLGALDLRAFASTMGANFAMMSNEGIAKLTAYSTEVGASKAGTAT NSLLQNFLFGRGTEASGFWMHKYGLVDETVNERNLRATYGDKWQAHRNKVTAGAAIGSDLLQKDVPGWVQRYALPALMAH GITKPEDLAKFASYMASNRKGAEALSTFLTQLPRVLKDFHLVEASKGIDEQFEAVKDSPVAKIDTLKARWETALTNLGEG ALPVVVPLAEKLGSALKRFNEYAEKNPGTIERMTDGFIDLSAVLIGGGVISMLDSSVHSFKLLKDVLFPVSRGLGGAAEA TSALSKAIAMKEVGGVVGIGRIAAALGPVGLAGALIALGAGAIALIDKITEANAGKNKPHGRGFLPDEPEKPKTMMVPLG HRGRGIVYAEVPVPSYSNEGHNRSVAPPAGRSADGPGAHADQRRRQEDCGCGDAAPSTGDESPADRSQRVRPPHGSATAI TEITAERDMRLVTMKQWDAFTALTNEIHEAMAQMGPIAQGLAVLVANSDPTDPAQVSIPINAMRAGAEMKKRAEELLERF EVMAKICTGERRQAGESLMEFFERFAAMDEVAILGAMSRNGVRLVGRG
Sequences:
>Translated_768_residues MFDAYKIGVTLSLVDHATPSIGRIMRGLAATEAEAAKLQKRLDGIRAGFVGGVASIAAGLALAAPFKTGIEHAEKFERAL LRLKNIGGIEPAVVARIRADALAGKYPSMSATETVDSFRDLHTAFGDAAHAMQFMPQFAKANAVSKWVYGKSAVQGERET LALAQVAERLGGSNSPEAMGRAIDLVARIRAGTGGNLGALDLRAFASTMGANFAMMSNEGIAKLTAYSTEVGASKAGTAT NSLLQNFLFGRGTEASGFWMHKYGLVDETVNERNLRATYGDKWQAHRNKVTAGAAIGSDLLQKDVPGWVQRYALPALMAH GITKPEDLAKFASYMASNRKGAEALSTFLTQLPRVLKDFHLVEASKGIDEQFEAVKDSPVAKIDTLKARWETALTNLGEG ALPVVVPLAEKLGSALKRFNEYAEKNPGTIERMTDGFIDLSAVLIGGGVISMLDSSVHSFKLLKDVLFPVSRGLGGAAEA TSALSKAIAMKEVGGVVGIGRIAAALGPVGLAGALIALGAGAIALIDKITEANAGKNKPHGRGFLPDEPEKPKTMMVPLG HRGRGIVYAEVPVPSYSNEGHNRSVAPPAGRSADGPGAHADQRRRQEDCGCGDAAPSTGDESPADRSQRVRPPHGSATAI TEITAERDMRLVTMKQWDAFTALTNEIHEAMAQMGPIAQGLAVLVANSDPTDPAQVSIPINAMRAGAEMKKRAEELLERF EVMAKICTGERRQAGESLMEFFERFAAMDEVAILGAMSRNGVRLVGRG >Mature_768_residues MFDAYKIGVTLSLVDHATPSIGRIMRGLAATEAEAAKLQKRLDGIRAGFVGGVASIAAGLALAAPFKTGIEHAEKFERAL LRLKNIGGIEPAVVARIRADALAGKYPSMSATETVDSFRDLHTAFGDAAHAMQFMPQFAKANAVSKWVYGKSAVQGERET LALAQVAERLGGSNSPEAMGRAIDLVARIRAGTGGNLGALDLRAFASTMGANFAMMSNEGIAKLTAYSTEVGASKAGTAT NSLLQNFLFGRGTEASGFWMHKYGLVDETVNERNLRATYGDKWQAHRNKVTAGAAIGSDLLQKDVPGWVQRYALPALMAH GITKPEDLAKFASYMASNRKGAEALSTFLTQLPRVLKDFHLVEASKGIDEQFEAVKDSPVAKIDTLKARWETALTNLGEG ALPVVVPLAEKLGSALKRFNEYAEKNPGTIERMTDGFIDLSAVLIGGGVISMLDSSVHSFKLLKDVLFPVSRGLGGAAEA TSALSKAIAMKEVGGVVGIGRIAAALGPVGLAGALIALGAGAIALIDKITEANAGKNKPHGRGFLPDEPEKPKTMMVPLG HRGRGIVYAEVPVPSYSNEGHNRSVAPPAGRSADGPGAHADQRRRQEDCGCGDAAPSTGDESPADRSQRVRPPHGSATAI TEITAERDMRLVTMKQWDAFTALTNEIHEAMAQMGPIAQGLAVLVANSDPTDPAQVSIPINAMRAGAEMKKRAEELLERF EVMAKICTGERRQAGESLMEFFERFAAMDEVAILGAMSRNGVRLVGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81277; Mature: 81277
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDAYKIGVTLSLVDHATPSIGRIMRGLAATEAEAAKLQKRLDGIRAGFVGGVASIAAGL CCCCEEECEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAAPFKTGIEHAEKFERALLRLKNIGGIEPAVVARIRADALAGKYPSMSATETVDSFRD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LHTAFGDAAHAMQFMPQFAKANAVSKWVYGKSAVQGERETLALAQVAERLGGSNSPEAMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCHHHHH RAIDLVARIRAGTGGNLGALDLRAFASTMGANFAMMSNEGIAKLTAYSTEVGASKAGTAT HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEHHHHCCCCCCCHHH NSLLQNFLFGRGTEASGFWMHKYGLVDETVNERNLRATYGDKWQAHRNKVTAGAAIGSDL HHHHHHHHHCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LQKDVPGWVQRYALPALMAHGITKPEDLAKFASYMASNRKGAEALSTFLTQLPRVLKDFH HHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LVEASKGIDEQFEAVKDSPVAKIDTLKARWETALTNLGEGALPVVVPLAEKLGSALKRFN HHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EYAEKNPGTIERMTDGFIDLSAVLIGGGVISMLDSSVHSFKLLKDVLFPVSRGLGGAAEA HHHHCCCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH TSALSKAIAMKEVGGVVGIGRIAAALGPVGLAGALIALGAGAIALIDKITEANAGKNKPH HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC GRGFLPDEPEKPKTMMVPLGHRGRGIVYAEVPVPSYSNEGHNRSVAPPAGRSADGPGAHA CCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DQRRRQEDCGCGDAAPSTGDESPADRSQRVRPPHGSATAITEITAERDMRLVTMKQWDAF HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHH TALTNEIHEAMAQMGPIAQGLAVLVANSDPTDPAQVSIPINAMRAGAEMKKRAEELLERF HHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH EVMAKICTGERRQAGESLMEFFERFAAMDEVAILGAMSRNGVRLVGRG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC >Mature Secondary Structure MFDAYKIGVTLSLVDHATPSIGRIMRGLAATEAEAAKLQKRLDGIRAGFVGGVASIAAGL CCCCEEECEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAAPFKTGIEHAEKFERALLRLKNIGGIEPAVVARIRADALAGKYPSMSATETVDSFRD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LHTAFGDAAHAMQFMPQFAKANAVSKWVYGKSAVQGERETLALAQVAERLGGSNSPEAMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCHHHHH RAIDLVARIRAGTGGNLGALDLRAFASTMGANFAMMSNEGIAKLTAYSTEVGASKAGTAT HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEHHHHCCCCCCCHHH NSLLQNFLFGRGTEASGFWMHKYGLVDETVNERNLRATYGDKWQAHRNKVTAGAAIGSDL HHHHHHHHHCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LQKDVPGWVQRYALPALMAHGITKPEDLAKFASYMASNRKGAEALSTFLTQLPRVLKDFH HHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LVEASKGIDEQFEAVKDSPVAKIDTLKARWETALTNLGEGALPVVVPLAEKLGSALKRFN HHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EYAEKNPGTIERMTDGFIDLSAVLIGGGVISMLDSSVHSFKLLKDVLFPVSRGLGGAAEA HHHHCCCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH TSALSKAIAMKEVGGVVGIGRIAAALGPVGLAGALIALGAGAIALIDKITEANAGKNKPH HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC GRGFLPDEPEKPKTMMVPLGHRGRGIVYAEVPVPSYSNEGHNRSVAPPAGRSADGPGAHA CCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DQRRRQEDCGCGDAAPSTGDESPADRSQRVRPPHGSATAITEITAERDMRLVTMKQWDAF HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHH TALTNEIHEAMAQMGPIAQGLAVLVANSDPTDPAQVSIPINAMRAGAEMKKRAEELLERF HHHHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH EVMAKICTGERRQAGESLMEFFERFAAMDEVAILGAMSRNGVRLVGRG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA