Click here to switch to the map view.

The map label for this gene is 17546208

Identifier: 17546208

GI number: 17546208

Start: 1592504

End: 1592980

Strand: Direct

Name: 17546208

Synonym: RSc1489

Alternate gene names: NA

Gene position: 1592504-1592980 (Clockwise)

Preceding gene: 17546207

Following gene: 17546210

Centisome position: 42.85

GC content: 65.62

Gene sequence:

>477_bases
ATGACGATGCGTGAGTTCAGTTCGATCGGAGCGTTCATCGCCCATCTGGCGACGCTCGAGGGGCGGCTGGCGCTGGACAG
TCGCGCAGCCCTCACCGACGCCGCCAAGCTGGTTGAAGAGCAGGCCAAAGCCGAGATCGGCGCGTACCAACCGGCCGTAG
GGCCATTCGCTGCGTGGCCGGAGCTGGCCGACAGCACGAAGGAAGACCGAGCGCGCAAGGGCTACCCGGAAAACGAGCCG
CTGCTGCGCACGGGTGACCTGCGGGACAGCATCTCCCATGAGGTGCATGGGCTGGAGGCCATCGTCGGCTCCACGGAAGA
CGTGGCGCTGTATCAGGAGTTGGGAACCCAGCACATCCCGCCGCGGCCGTTCCTCGGCACTGCAGCGGTGGTCAAGGAGA
AGGAGATCGTGAAGCTGATCGGGGAACAGTTGGCCGGCACGCTCGCCGGTGTCCGCTACCGGATCAAGGGCGATTAA

Upstream 100 bases:

>100_bases
GAGATCGCGTTCAGCCTGGAGGATCGGTACCGCCAGGCCTTCGCGATCATCGCTGGCGAGCTCAAGGGCGGCAAATTCAA
CTGGCAAAACATGGAGTGGG

Downstream 100 bases:

>100_bases
CCGGCCAGCACTTGGTACAGGACCATAAGCACCACGATCAGCACAGGGATGCCAACGATGAGGGAAACCGTCGAGACCGC
AAACAGGCCGACCACCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTMREFSSIGAFIAHLATLEGRLALDSRAALTDAAKLVEEQAKAEIGAYQPAVGPFAAWPELADSTKEDRARKGYPENEP
LLRTGDLRDSISHEVHGLEAIVGSTEDVALYQELGTQHIPPRPFLGTAAVVKEKEIVKLIGEQLAGTLAGVRYRIKGD

Sequences:

>Translated_158_residues
MTMREFSSIGAFIAHLATLEGRLALDSRAALTDAAKLVEEQAKAEIGAYQPAVGPFAAWPELADSTKEDRARKGYPENEP
LLRTGDLRDSISHEVHGLEAIVGSTEDVALYQELGTQHIPPRPFLGTAAVVKEKEIVKLIGEQLAGTLAGVRYRIKGD
>Mature_157_residues
TMREFSSIGAFIAHLATLEGRLALDSRAALTDAAKLVEEQAKAEIGAYQPAVGPFAAWPELADSTKEDRARKGYPENEPL
LRTGDLRDSISHEVHGLEAIVGSTEDVALYQELGTQHIPPRPFLGTAAVVKEKEIVKLIGEQLAGTLAGVRYRIKGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17079; Mature: 16947

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMREFSSIGAFIAHLATLEGRLALDSRAALTDAAKLVEEQAKAEIGAYQPAVGPFAAWP
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCH
ELADSTKEDRARKGYPENEPLLRTGDLRDSISHEVHGLEAIVGSTEDVALYQELGTQHIP
HHHCCCHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
PRPFLGTAAVVKEKEIVKLIGEQLAGTLAGVRYRIKGD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC
>Mature Secondary Structure 
TMREFSSIGAFIAHLATLEGRLALDSRAALTDAAKLVEEQAKAEIGAYQPAVGPFAAWP
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCH
ELADSTKEDRARKGYPENEPLLRTGDLRDSISHEVHGLEAIVGSTEDVALYQELGTQHIP
HHHCCCHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
PRPFLGTAAVVKEKEIVKLIGEQLAGTLAGVRYRIKGD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA