| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ppsA [H]
Identifier: 17546140
GI number: 17546140
Start: 1520988
End: 1523375
Strand: Direct
Name: ppsA [H]
Synonym: RSc1421
Alternate gene names: 17546140
Gene position: 1520988-1523375 (Clockwise)
Preceding gene: 17546138
Following gene: 17546141
Centisome position: 40.93
GC content: 65.7
Gene sequence:
>2388_bases ATGACCAACCTGTCGATGGACGGCGCCTACGTGCTGCCGTTCGAGCAATTGCGGATGACCGATGTCGAGGTCGTCGGCGG CAAGAACGCATCGCTGGGCGAGATGATCTCCCAACTGGACAGCGCCGGCGTGCGCGTTCCGGGCGGTTTTGCCACCACGG CACTGGCTTTCCGCGATTTCCTCCAGCACAACAACCTGACCGAGCGCATTTCCCAGCGCCTGGCCAGCCTGGACGTCGAC GACGTCAAGGCGCTGGCCGCGGCCGGCAAGGAAATCCGCGAATGGGTCGCCACGGCGCCGTTCCAGTCGCGCCTGGAGCA GGAGATCCGCGAGCATTTCGAACGCGTCTCCAAGCGCGAGGGCGCCGAGGCCTCGTTCGCGGTGCGCTCGTCGGCCACGG CCGAAGACCTGCCGGACGCCTCGTTCGCCGGCCAGCAGGAGAGCTACCTCAACGTCTCCGGCATCGATGACGTGCTCGAC AAGATCAAGCACGTGTTCGCCTCGCTGTACAACGACCGCGCTATCTCCTACCGCGTGCACAAGGGCTTCGCCCACGACGT GGTGGCGCTCTCCGCCGGCATCCAGCGCATGGTGCGCTCGGACTGCGGCGCGTCGGGCGTGATGTTCACGATCGACACCG AATCGGGCTTCCAGGACGTCGTCTTCATCACCTCCAGCTACGGCCTGGGCGAGACGGTGGTGCAGGGCGCGGTCAACCCG GACGAGTTCTACGTGTTCAAGCCGACGCTGGCCGCCGGCAAGTACCCGATCATCCGCCGCTCGATCGGCTCCAAGCTGAT CAAGATGGAGTTCACGCAGGCCGGCGAGGAAGGCCGCGTCAAGACCGTCGACGTGCCGGGCGAGTTGCGCAACCGCTACT CGCTGGTCGACGAAGACGTGGTCGAGCTGGCCAAGTACGCCGTCATCATCGAGAAGCACTACGGTCGCCCGATGGACATC GAGTGGGGTAAGGACGGTAAGGACGGCAAGATCTACATCCTGCAGGCCCGCCCCGAGACGGTGAAGAGCCAGTCGGTCGG CAAGGTCGAGCAGCGCTTCCGCCTGAAGGGCTCGGCGCCGGTGCTGACCACCGGCCGCGCGATCGGCCAGAAGATCGGTA CGGGCCCCGTGCGCGTGATCAACGATCCGGCCGAAATGGAGCGCGTGCAGCCGGGCGACGTGCTGGTCGCCGACATGACC GACCCGAACTGGGAGCCGGTGATGAAGCGCGCCTCGGCCATCGTCACCAACCGTGGCGGCCGCACCTGTCACGCCGCCAT CATCGCGCGTGAGCTGGGCGTGCCGGCCGTGGTCGGCTGCGGCGACGCCACCGACCTGCTGAAGGACGGCACGCTGGTCA CCGTGTCCTGCGCCGAGGGCGACGAAGGCAAGATCTACGACGGCCTGCTCGAGACGGAAATCACCGAAGTGCGCCGCGGC GAGATGCCGCCGATCGACGTCAAGATCATGATGAACGTCGGCAACCCGCAGCTGGCCTTCGAGTTCGCGCAGATCCCGAA CGGCGGCGTGGGCCTGGCCCGCCTCGAGTTCATCATCAACAACAACATCGGCGTCCACCCGAAGGCGATCCTCGACTACC CGCAAGTCGACAGCGACCTGAAGAAGGCCGTGGAAAGCGTGGCCCGCGGCCATGCCAGCCCGCGCGCGTTCTACGTCGAC AAGCTGGCCGAGGGCATTGCGACCATCGCCGCCGCGTTCTATCCGAAGCCCGTGATCGTGCGCCTGTCCGACTTCAAGTC GAACGAGTACAAGAAGCTGATCGGCGGTTCGCGCTACGAGCCGGACGAAGAGAACCCCATGCTGGGCTTCCGCGGCGCCT CGCGTTACATCGCCGAAGACTTCGCCGAGGCCTTCGAGATGGAGTGCCGCGCCATGAAGCGCGTGCGCGAAGAGATGGGC CTGACCAACGTCGAGATCATGGTGCCGTTCGTGCGCACGCTGGGCCAGGCCGCCATGGTGGTCGACCTGCTGGGCAAGTA CGGCCTGAAGCGCGGCGAGAACGACCTGCGCCTGATCATGATGTGCGAAGTGCCGTCCAATGCGATCCTGGCCAAGGAGT TCCTGGAGTATTTCGACGGCTTCTCGATCGGCTCGAACGACCTGACGCAGCTGACGCTGGGCCTGGACCGCGACTCCGGC ATGGAACTGCTCGCCAGGGATTTCGACGAGCGTGATCCGGCGGTCAAGTTCATGCTGTCGCGCGCCATCTCGACCGCGAA GTCGATGGGCAAGTATGTCGGCATCTGCGGCCAGGGCCCGTCCGACCACCCGGACTTTGCCGAGTGGCTGGCCAAGGAAG GCATCTCGTCCATCTCGCTGAACCCGGATTCGGTGATCGACACCTGGCAGAAGCTGGGTTCGGCCTGA
Upstream 100 bases:
>100_bases CCGCCTTCCGGATGATTTAGCTAAGCGATTCGCGCGGCCAGACGACAAGAACACAGCGCCGAGCGCATCCGATCGGTTTT CCACTTAGTAAGAGGCTTGT
Downstream 100 bases:
>100_bases TCCCGCTGTAAAAGCGGCGCGCGCCCCGGCGGGTGCGCGCCGACAAAAACGCGAAGTGCCCGGTGGCGTCCAACGCTGGC GGGGGCGGAGCGATCAGCCC
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 795; Mature: 794
Protein sequence:
>795_residues MTNLSMDGAYVLPFEQLRMTDVEVVGGKNASLGEMISQLDSAGVRVPGGFATTALAFRDFLQHNNLTERISQRLASLDVD DVKALAAAGKEIREWVATAPFQSRLEQEIREHFERVSKREGAEASFAVRSSATAEDLPDASFAGQQESYLNVSGIDDVLD KIKHVFASLYNDRAISYRVHKGFAHDVVALSAGIQRMVRSDCGASGVMFTIDTESGFQDVVFITSSYGLGETVVQGAVNP DEFYVFKPTLAAGKYPIIRRSIGSKLIKMEFTQAGEEGRVKTVDVPGELRNRYSLVDEDVVELAKYAVIIEKHYGRPMDI EWGKDGKDGKIYILQARPETVKSQSVGKVEQRFRLKGSAPVLTTGRAIGQKIGTGPVRVINDPAEMERVQPGDVLVADMT DPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGKIYDGLLETEITEVRRG EMPPIDVKIMMNVGNPQLAFEFAQIPNGGVGLARLEFIINNNIGVHPKAILDYPQVDSDLKKAVESVARGHASPRAFYVD KLAEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAEAFEMECRAMKRVREEMG LTNVEIMVPFVRTLGQAAMVVDLLGKYGLKRGENDLRLIMMCEVPSNAILAKEFLEYFDGFSIGSNDLTQLTLGLDRDSG MELLARDFDERDPAVKFMLSRAISTAKSMGKYVGICGQGPSDHPDFAEWLAKEGISSISLNPDSVIDTWQKLGSA
Sequences:
>Translated_795_residues MTNLSMDGAYVLPFEQLRMTDVEVVGGKNASLGEMISQLDSAGVRVPGGFATTALAFRDFLQHNNLTERISQRLASLDVD DVKALAAAGKEIREWVATAPFQSRLEQEIREHFERVSKREGAEASFAVRSSATAEDLPDASFAGQQESYLNVSGIDDVLD KIKHVFASLYNDRAISYRVHKGFAHDVVALSAGIQRMVRSDCGASGVMFTIDTESGFQDVVFITSSYGLGETVVQGAVNP DEFYVFKPTLAAGKYPIIRRSIGSKLIKMEFTQAGEEGRVKTVDVPGELRNRYSLVDEDVVELAKYAVIIEKHYGRPMDI EWGKDGKDGKIYILQARPETVKSQSVGKVEQRFRLKGSAPVLTTGRAIGQKIGTGPVRVINDPAEMERVQPGDVLVADMT DPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGKIYDGLLETEITEVRRG EMPPIDVKIMMNVGNPQLAFEFAQIPNGGVGLARLEFIINNNIGVHPKAILDYPQVDSDLKKAVESVARGHASPRAFYVD KLAEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAEAFEMECRAMKRVREEMG LTNVEIMVPFVRTLGQAAMVVDLLGKYGLKRGENDLRLIMMCEVPSNAILAKEFLEYFDGFSIGSNDLTQLTLGLDRDSG MELLARDFDERDPAVKFMLSRAISTAKSMGKYVGICGQGPSDHPDFAEWLAKEGISSISLNPDSVIDTWQKLGSA >Mature_794_residues TNLSMDGAYVLPFEQLRMTDVEVVGGKNASLGEMISQLDSAGVRVPGGFATTALAFRDFLQHNNLTERISQRLASLDVDD VKALAAAGKEIREWVATAPFQSRLEQEIREHFERVSKREGAEASFAVRSSATAEDLPDASFAGQQESYLNVSGIDDVLDK IKHVFASLYNDRAISYRVHKGFAHDVVALSAGIQRMVRSDCGASGVMFTIDTESGFQDVVFITSSYGLGETVVQGAVNPD EFYVFKPTLAAGKYPIIRRSIGSKLIKMEFTQAGEEGRVKTVDVPGELRNRYSLVDEDVVELAKYAVIIEKHYGRPMDIE WGKDGKDGKIYILQARPETVKSQSVGKVEQRFRLKGSAPVLTTGRAIGQKIGTGPVRVINDPAEMERVQPGDVLVADMTD PNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGKIYDGLLETEITEVRRGE MPPIDVKIMMNVGNPQLAFEFAQIPNGGVGLARLEFIINNNIGVHPKAILDYPQVDSDLKKAVESVARGHASPRAFYVDK LAEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAEAFEMECRAMKRVREEMGL TNVEIMVPFVRTLGQAAMVVDLLGKYGLKRGENDLRLIMMCEVPSNAILAKEFLEYFDGFSIGSNDLTQLTLGLDRDSGM ELLARDFDERDPAVKFMLSRAISTAKSMGKYVGICGQGPSDHPDFAEWLAKEGISSISLNPDSVIDTWQKLGSA
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=783, Percent_Identity=64.6232439335888, Blast_Score=1041, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=411, Percent_Identity=26.0340632603406, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI1788726, Length=193, Percent_Identity=33.6787564766839, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI48994992, Length=409, Percent_Identity=25.6723716381418, Blast_Score=90, Evalue=7e-19, Organism=Escherichia coli, GI1789193, Length=406, Percent_Identity=26.3546798029557, Blast_Score=83, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17564524, Length=330, Percent_Identity=28.4848484848485, Blast_Score=93, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 87052; Mature: 86921
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLSMDGAYVLPFEQLRMTDVEVVGGKNASLGEMISQLDSAGVRVPGGFATTALAFRDF CCCCCCCCEEECCHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LQHNNLTERISQRLASLDVDDVKALAAAGKEIREWVATAPFQSRLEQEIREHFERVSKRE HHCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC GAEASFAVRSSATAEDLPDASFAGQQESYLNVSGIDDVLDKIKHVFASLYNDRAISYRVH CCCCEEEECCCCCHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCEEEEEEC KGFAHDVVALSAGIQRMVRSDCGASGVMFTIDTESGFQDVVFITSSYGLGETVVQGAVNP CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCCC DEFYVFKPTLAAGKYPIIRRSIGSKLIKMEFTQAGEEGRVKTVDVPGELRNRYSLVDEDV CCEEEECCCCCCCCCHHHHHHHCCHHEEEHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH VELAKYAVIIEKHYGRPMDIEWGKDGKDGKIYILQARPETVKSQSVGKVEQRFRLKGSAP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC VLTTGRAIGQKIGTGPVRVINDPAEMERVQPGDVLVADMTDPNWEPVMKRASAIVTNRGG EEECCHHHHHHCCCCCEEEECCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC RTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGKIYDGLLETEITEVRRG CHHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCC EMPPIDVKIMMNVGNPQLAFEFAQIPNGGVGLARLEFIINNNIGVHPKAILDYPQVDSDL CCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCHHH KKAVESVARGHASPRAFYVDKLAEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCC PDEENPMLGFRGASRYIAEDFAEAFEMECRAMKRVREEMGLTNVEIMVPFVRTLGQAAMV CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VDLLGKYGLKRGENDLRLIMMCEVPSNAILAKEFLEYFDGFSIGSNDLTQLTLGLDRDSG HHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC MELLARDFDERDPAVKFMLSRAISTAKSMGKYVGICGQGPSDHPDFAEWLAKEGISSISL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHCCCCEECC NPDSVIDTWQKLGSA CCHHHHHHHHHHCCC >Mature Secondary Structure TNLSMDGAYVLPFEQLRMTDVEVVGGKNASLGEMISQLDSAGVRVPGGFATTALAFRDF CCCCCCCEEECCHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LQHNNLTERISQRLASLDVDDVKALAAAGKEIREWVATAPFQSRLEQEIREHFERVSKRE HHCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC GAEASFAVRSSATAEDLPDASFAGQQESYLNVSGIDDVLDKIKHVFASLYNDRAISYRVH CCCCEEEECCCCCHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCEEEEEEC KGFAHDVVALSAGIQRMVRSDCGASGVMFTIDTESGFQDVVFITSSYGLGETVVQGAVNP CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCCC DEFYVFKPTLAAGKYPIIRRSIGSKLIKMEFTQAGEEGRVKTVDVPGELRNRYSLVDEDV CCEEEECCCCCCCCCHHHHHHHCCHHEEEHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH VELAKYAVIIEKHYGRPMDIEWGKDGKDGKIYILQARPETVKSQSVGKVEQRFRLKGSAP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC VLTTGRAIGQKIGTGPVRVINDPAEMERVQPGDVLVADMTDPNWEPVMKRASAIVTNRGG EEECCHHHHHHCCCCCEEEECCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC RTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGKIYDGLLETEITEVRRG CHHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCC EMPPIDVKIMMNVGNPQLAFEFAQIPNGGVGLARLEFIINNNIGVHPKAILDYPQVDSDL CCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCHHH KKAVESVARGHASPRAFYVDKLAEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCC PDEENPMLGFRGASRYIAEDFAEAFEMECRAMKRVREEMGLTNVEIMVPFVRTLGQAAMV CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VDLLGKYGLKRGENDLRLIMMCEVPSNAILAKEFLEYFDGFSIGSNDLTQLTLGLDRDSG HHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCC MELLARDFDERDPAVKFMLSRAISTAKSMGKYVGICGQGPSDHPDFAEWLAKEGISSISL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHCCCCEECC NPDSVIDTWQKLGSA CCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]