Click here to switch to the map view.

The map label for this gene is 17546116

Identifier: 17546116

GI number: 17546116

Start: 1492417

End: 1493643

Strand: Direct

Name: 17546116

Synonym: RSc1397

Alternate gene names: NA

Gene position: 1492417-1493643 (Clockwise)

Preceding gene: 17546115

Following gene: 17546117

Centisome position: 40.16

GC content: 70.33

Gene sequence:

>1227_bases
ATGCAGGACAACAACCTGGTCATGGCGCTGCTGGGCGCCGGCGTCGTCTTCGTGCTGGTGATCGTGGTCTACAACCAGTG
GCAGATCCGCAAGGCGCGCGGCCCACAGGCGTACCAGCCGCCGGCCGACGAAGGCGTGCGCACCGACGCATGGAAAGACC
GCCAGGAGCCGGCGCTGGGCGCGGGCGCCGCCGATGACACCGGCCGCGTGGAGCCCCGGCTCGAACCCGGGCCGGTGGCG
CCGCTCAAGGCGCAGCCGTCCACCGGCAGCGCCGAGACCGAAGCCGGCGTGATCGGCGCCGAGCTCGCGCCGTCGGGCGA
GGAGGCCGTGCTGGAGTCGGCCGAGGCCGGGGCGGCGAGCGCCGCGGAAGATGTGCCCGGCGCGCTGGAGCCGGCCTCGG
GCGTGATCGATCCGCTGATCGACTGCATCGTGCCGCTGCACCCCGATCGCGAGGTCTCGGGCGACCGCCTGCTGCCCGCG
ATGTCCAAGCTGCGCCGCGCGGGCACCAAGCAGATCCACGTAGAGGGCCTGAACCCGGTGGCCAACGCATGGGAGACCAT
CCGTGCCGGCCAGCGCTACCTTGACCTGCAGGTGGCCGTGCAGCTGGCCAACCGCACCGGCCCGCTGAACGCGCTCGAGT
TCTCCGAGTTCATCAACGCCATCGACCCGCTGTGCGAAGCGGCCGATGCCACGCCCGAGCTGCCCGAGATGAACGAGACG
CTGTCCAACGCCCGCGAGCTCGACGCCTTTGCCTCCGAATGCGACGTGCAGCTGGGCGTGAGCGTGATCTCCGACGGCGC
GCCGTGGTCCGCCGCCTATGTGCAGACCGTGGCAACGCAGGACGGCCTGGTGCTGTCGCGCGACGGCACGCGCTTCACGC
GCTTCCATGCCGGCACGGACGGCGTGCAGCGCGCGCTGTTCACGCTGCAGTTCGTCGACACCAACTTCCTGCGCGACGAT
CTGACCGCCAAGGGCGGCCGCCAGATCACGCTGCTGCTCGACGTGCCGCTGGCCGAAGAAGTGGCCAAGCCGTTCAAGCA
GATCTGCGAATACGCCTACACGCTGTCGCAGCGCATGGGCGCGCAGGTGGTGGACGACAACCTGCGTCCGCTGACCGAGC
AATCCTTCATCGCCATCCAGAAGCATCTGCGCGTGCTGTACGACAAGCTCGAGGCGCGCGGCCTCCCGGCGGGTTCCAGC
GCGGCAGTGCGCCTGTTCAGCCTCTGA

Upstream 100 bases:

>100_bases
TGGCGCAACAGCTGATCGGTGTGACCATGCAGGAGCAGGGCGTGTCCCGGATCGTGGCGGTGGATATGGATGCCGCCCTG
ACCATGGCGGAGGCCGCGTG

Downstream 100 bases:

>100_bases
CCGATCACCGATGAGCAAGACCGAACATCCCGCGTCCGGCGCGTCGCCCGAGACGCGGGCAGCCGCGCTGCGCGCGACGC
TGAACCGCTACGCCCACGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Protein ZipA; Transmembrane Protein; ZipA Related Protein Possibly Involved In; Chromosome Segregation Protein Smc

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MQDNNLVMALLGAGVVFVLVIVVYNQWQIRKARGPQAYQPPADEGVRTDAWKDRQEPALGAGAADDTGRVEPRLEPGPVA
PLKAQPSTGSAETEAGVIGAELAPSGEEAVLESAEAGAASAAEDVPGALEPASGVIDPLIDCIVPLHPDREVSGDRLLPA
MSKLRRAGTKQIHVEGLNPVANAWETIRAGQRYLDLQVAVQLANRTGPLNALEFSEFINAIDPLCEAADATPELPEMNET
LSNARELDAFASECDVQLGVSVISDGAPWSAAYVQTVATQDGLVLSRDGTRFTRFHAGTDGVQRALFTLQFVDTNFLRDD
LTAKGGRQITLLLDVPLAEEVAKPFKQICEYAYTLSQRMGAQVVDDNLRPLTEQSFIAIQKHLRVLYDKLEARGLPAGSS
AAVRLFSL

Sequences:

>Translated_408_residues
MQDNNLVMALLGAGVVFVLVIVVYNQWQIRKARGPQAYQPPADEGVRTDAWKDRQEPALGAGAADDTGRVEPRLEPGPVA
PLKAQPSTGSAETEAGVIGAELAPSGEEAVLESAEAGAASAAEDVPGALEPASGVIDPLIDCIVPLHPDREVSGDRLLPA
MSKLRRAGTKQIHVEGLNPVANAWETIRAGQRYLDLQVAVQLANRTGPLNALEFSEFINAIDPLCEAADATPELPEMNET
LSNARELDAFASECDVQLGVSVISDGAPWSAAYVQTVATQDGLVLSRDGTRFTRFHAGTDGVQRALFTLQFVDTNFLRDD
LTAKGGRQITLLLDVPLAEEVAKPFKQICEYAYTLSQRMGAQVVDDNLRPLTEQSFIAIQKHLRVLYDKLEARGLPAGSS
AAVRLFSL
>Mature_408_residues
MQDNNLVMALLGAGVVFVLVIVVYNQWQIRKARGPQAYQPPADEGVRTDAWKDRQEPALGAGAADDTGRVEPRLEPGPVA
PLKAQPSTGSAETEAGVIGAELAPSGEEAVLESAEAGAASAAEDVPGALEPASGVIDPLIDCIVPLHPDREVSGDRLLPA
MSKLRRAGTKQIHVEGLNPVANAWETIRAGQRYLDLQVAVQLANRTGPLNALEFSEFINAIDPLCEAADATPELPEMNET
LSNARELDAFASECDVQLGVSVISDGAPWSAAYVQTVATQDGLVLSRDGTRFTRFHAGTDGVQRALFTLQFVDTNFLRDD
LTAKGGRQITLLLDVPLAEEVAKPFKQICEYAYTLSQRMGAQVVDDNLRPLTEQSFIAIQKHLRVLYDKLEARGLPAGSS
AAVRLFSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43713; Mature: 43713

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDNNLVMALLGAGVVFVLVIVVYNQWQIRKARGPQAYQPPADEGVRTDAWKDRQEPALG
CCCCCEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGAADDTGRVEPRLEPGPVAPLKAQPSTGSAETEAGVIGAELAPSGEEAVLESAEAGAAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCC
AAEDVPGALEPASGVIDPLIDCIVPLHPDREVSGDRLLPAMSKLRRAGTKQIHVEGLNPV
CHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHH
ANAWETIRAGQRYLDLQVAVQLANRTGPLNALEFSEFINAIDPLCEAADATPELPEMNET
HHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LSNARELDAFASECDVQLGVSVISDGAPWSAAYVQTVATQDGLVLSRDGTRFTRFHAGTD
HHHHHHHHHHHHHCCHHCCHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEECCCH
GVQRALFTLQFVDTNFLRDDLTAKGGRQITLLLDVPLAEEVAKPFKQICEYAYTLSQRMG
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC
AQVVDDNLRPLTEQSFIAIQKHLRVLYDKLEARGLPAGSSAAVRLFSL
CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECC
>Mature Secondary Structure
MQDNNLVMALLGAGVVFVLVIVVYNQWQIRKARGPQAYQPPADEGVRTDAWKDRQEPALG
CCCCCEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGAADDTGRVEPRLEPGPVAPLKAQPSTGSAETEAGVIGAELAPSGEEAVLESAEAGAAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCC
AAEDVPGALEPASGVIDPLIDCIVPLHPDREVSGDRLLPAMSKLRRAGTKQIHVEGLNPV
CHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHH
ANAWETIRAGQRYLDLQVAVQLANRTGPLNALEFSEFINAIDPLCEAADATPELPEMNET
HHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LSNARELDAFASECDVQLGVSVISDGAPWSAAYVQTVATQDGLVLSRDGTRFTRFHAGTD
HHHHHHHHHHHHHCCHHCCHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEECCCH
GVQRALFTLQFVDTNFLRDDLTAKGGRQITLLLDVPLAEEVAKPFKQICEYAYTLSQRMG
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC
AQVVDDNLRPLTEQSFIAIQKHLRVLYDKLEARGLPAGSSAAVRLFSL
CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA