| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is folE
Identifier: 17546106
GI number: 17546106
Start: 1480199
End: 1480828
Strand: Direct
Name: folE
Synonym: RSc1387
Alternate gene names: 17546106
Gene position: 1480199-1480828 (Clockwise)
Preceding gene: 17546105
Following gene: 17546114
Centisome position: 39.83
GC content: 67.78
Gene sequence:
>630_bases ATGCTGTGTTCACATGACGACGACGACCCGATCCGGACAGCGGCCAGCCACGGCATCCGGCGCGTCCGTGCGTTCGATGC GCAGCGATTCGAGCTGGCCGTCCAGAGCCTGCTCGAGGCGAGCGGCATCGAGATCGATACCGCGCACACGGGCAAGACGG CCCAGCGCGTGCGCGAGCTTTGGCAGCGGCGCCTGCTGGACGGCTACGACATCGATCCCGCCGAGGCGCTGGGCCACGGC TTCGAGGATCCGCGCCGCGATATGGTCATCATCCGCAGCATTGCGGTGCACGGCGTCTGTCCGCACCATCTGCTGCCGTT TCGGGGTGTCGCGCACGTGGCCTACCTGCCCGATGGGCGGCTGCACGGTTTCGGCCGCATCGCGCGCATGATCGATGCGA TCAGCCACCGCTACACCTACCAGGAGTGGGTGACGAACGAGGTCGCGCATGCCCTGGTCGCGCACGGCCAGGCGCGCGGC GCGGCGTGCCTGATCGAAGCCGAGCAGCTCTGCCTGCTGATGGGCGAGAACCGGCGCGGCGACGAGCGCGTGATTACCCA GTGCTATGTCGGGGAATTCGAGCAGAACATGCAGGCCCGGACGGAATTCCTGCGCGCGATCAAGGGCTGA
Upstream 100 bases:
>100_bases GCCCGCCGGGCAATCGAGTCCATATAATCGACAGATCATCTTCGGTACGCGGTGATCGTGATGCGGTGGATCGATCTCCG GCCGATTTGGAGGAAAGCAA
Downstream 100 bases:
>100_bases CGCGCGCGGCGATGACGGCGGGCGCATCGCCTCGGCGCGCCCAGCGCCGCCGGCCGCCGATCACGGCCTGCGGGCAAGCG GACGGACAACGCCGGCCCGC
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MLCSHDDDDPIRTAASHGIRRVRAFDAQRFELAVQSLLEASGIEIDTAHTGKTAQRVRELWQRRLLDGYDIDPAEALGHG FEDPRRDMVIIRSIAVHGVCPHHLLPFRGVAHVAYLPDGRLHGFGRIARMIDAISHRYTYQEWVTNEVAHALVAHGQARG AACLIEAEQLCLLMGENRRGDERVITQCYVGEFEQNMQARTEFLRAIKG
Sequences:
>Translated_209_residues MLCSHDDDDPIRTAASHGIRRVRAFDAQRFELAVQSLLEASGIEIDTAHTGKTAQRVRELWQRRLLDGYDIDPAEALGHG FEDPRRDMVIIRSIAVHGVCPHHLLPFRGVAHVAYLPDGRLHGFGRIARMIDAISHRYTYQEWVTNEVAHALVAHGQARG AACLIEAEQLCLLMGENRRGDERVITQCYVGEFEQNMQARTEFLRAIKG >Mature_209_residues MLCSHDDDDPIRTAASHGIRRVRAFDAQRFELAVQSLLEASGIEIDTAHTGKTAQRVRELWQRRLLDGYDIDPAEALGHG FEDPRRDMVIIRSIAVHGVCPHHLLPFRGVAHVAYLPDGRLHGFGRIARMIDAISHRYTYQEWVTNEVAHALVAHGQARG AACLIEAEQLCLLMGENRRGDERVITQCYVGEFEQNMQARTEFLRAIKG
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family
Homologues:
Organism=Homo sapiens, GI66932968, Length=129, Percent_Identity=30.2325581395349, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI4503949, Length=129, Percent_Identity=30.2325581395349, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI66932970, Length=110, Percent_Identity=28.1818181818182, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI66932972, Length=87, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17560486, Length=176, Percent_Identity=31.8181818181818, Blast_Score=107, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6321706, Length=182, Percent_Identity=28.021978021978, Blast_Score=89, Evalue=6e-19, Organism=Drosophila melanogaster, GI24656796, Length=143, Percent_Identity=29.3706293706294, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI24656782, Length=142, Percent_Identity=29.5774647887324, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI24656791, Length=143, Percent_Identity=29.3706293706294, Blast_Score=81, Evalue=4e-16,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): GCH1_RALSO (Q8XZK8)
Other databases:
- EMBL: AL646052 - RefSeq: NP_519508.1 - ProteinModelPortal: Q8XZK8 - SMR: Q8XZK8 - GeneID: 1220211 - GenomeReviews: AL646052_GR - KEGG: rso:RSc1387 - NMPDR: fig|267608.1.peg.1387 - HOGENOM: HBG370191 - OMA: RELWQKR - ProtClustDB: PRK09347 - BioCyc: RSOL267608:RSC1387-MONOMER - BRENDA: 3.5.4.16 - GO: GO:0005737 - HAMAP: MF_00223 - InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =3.5.4.16
Molecular weight: Translated: 23574; Mature: 23574
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCSHDDDDPIRTAASHGIRRVRAFDAQRFELAVQSLLEASGIEIDTAHTGKTAQRVREL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHH WQRRLLDGYDIDPAEALGHGFEDPRRDMVIIRSIAVHGVCPHHLLPFRGVAHVAYLPDGR HHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCHHHEEECCCCC LHGFGRIARMIDAISHRYTYQEWVTNEVAHALVAHGQARGAACLIEAEQLCLLMGENRRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCC DERVITQCYVGEFEQNMQARTEFLRAIKG HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLCSHDDDDPIRTAASHGIRRVRAFDAQRFELAVQSLLEASGIEIDTAHTGKTAQRVREL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHH WQRRLLDGYDIDPAEALGHGFEDPRRDMVIIRSIAVHGVCPHHLLPFRGVAHVAYLPDGR HHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCHHHEEECCCCC LHGFGRIARMIDAISHRYTYQEWVTNEVAHALVAHGQARGAACLIEAEQLCLLMGENRRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCC DERVITQCYVGEFEQNMQARTEFLRAIKG HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852