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The map label for this gene is 17546048

Identifier: 17546048

GI number: 17546048

Start: 1415361

End: 1415957

Strand: Direct

Name: 17546048

Synonym: RSc1329

Alternate gene names: NA

Gene position: 1415361-1415957 (Clockwise)

Preceding gene: 17546047

Following gene: 17546049

Centisome position: 38.08

GC content: 73.7

Gene sequence:

>597_bases
GTGGCCGAGGCAGCGTTCGCAAGCTGCCTGCACGACATCCGCGCCTGCCGTCTGTGCGAAGGCGCGCTGCCGCACGAGCC
GCGCCCGGTGGTCTTGGCGGACCGCCGCGCCCGCGTGCTGATCGTCGGGCAGGCGCCCGGGCGCATCGTCCACGAGACCG
GCATTCCCTGGAACGACCGCTCGGGCGATCGCCTGCGCGAGTGGCTGCGGATCGGCTACGACGCGTTCTACGCCGACCGG
CGCATCGCCGTGGTGCCGATGGGCTTCTGCTTTCCCGGTACGGGGCCCAACGGCGATCTGCCGCCGCGGCCGGCGTGCGC
GCCGCAATGGCACCGGCCGCTGCTGACGGCGATGCCGGACCTGAAGCTGGCGCTGCTGGTCGGCGGCTACGCGCAGCGCT
ACTACCTCGACGTGCCGCGCGGCATGCCGCTGACCGAGGTGGTCCGCCGCGGCCCGGTGCGGGACGCCGAGGGGCGCGTG
CTGTTTCCGCTGCCGCATCCGAGCCCGCGCAACCTGGCCTGGTTCAAGCACAACCCGTGGTTCGACGCGCAGATCGTGCC
GCGGCTGCGCGCGGCGCTGGCTGCCGCATTCGTGTGA

Upstream 100 bases:

>100_bases
CGCAGCGGTTCGAAGTCATGCCTGCCGATGCCGATCGCATCAAGGGCTACATCGCCCAGCACACCGGTCTGTAAAAGCCA
TGGCAGTCGTGCCGGATGAC

Downstream 100 bases:

>100_bases
TCGATCGGACGGCGCCGATGCCTGGCGCTGTAGCAGAACCGATACAATCGGAGTCTCTCTCCCGATTCTGTTTTTCCGCA
TGTCCGCCAACGATGCTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MAEAAFASCLHDIRACRLCEGALPHEPRPVVLADRRARVLIVGQAPGRIVHETGIPWNDRSGDRLREWLRIGYDAFYADR
RIAVVPMGFCFPGTGPNGDLPPRPACAPQWHRPLLTAMPDLKLALLVGGYAQRYYLDVPRGMPLTEVVRRGPVRDAEGRV
LFPLPHPSPRNLAWFKHNPWFDAQIVPRLRAALAAAFV

Sequences:

>Translated_198_residues
MAEAAFASCLHDIRACRLCEGALPHEPRPVVLADRRARVLIVGQAPGRIVHETGIPWNDRSGDRLREWLRIGYDAFYADR
RIAVVPMGFCFPGTGPNGDLPPRPACAPQWHRPLLTAMPDLKLALLVGGYAQRYYLDVPRGMPLTEVVRRGPVRDAEGRV
LFPLPHPSPRNLAWFKHNPWFDAQIVPRLRAALAAAFV
>Mature_197_residues
AEAAFASCLHDIRACRLCEGALPHEPRPVVLADRRARVLIVGQAPGRIVHETGIPWNDRSGDRLREWLRIGYDAFYADRR
IAVVPMGFCFPGTGPNGDLPPRPACAPQWHRPLLTAMPDLKLALLVGGYAQRYYLDVPRGMPLTEVVRRGPVRDAEGRVL
FPLPHPSPRNLAWFKHNPWFDAQIVPRLRAALAAAFV

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 22137; Mature: 22006

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAAFASCLHDIRACRLCEGALPHEPRPVVLADRRARVLIVGQAPGRIVHETGIPWNDR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEECCCCCCCC
SGDRLREWLRIGYDAFYADRRIAVVPMGFCFPGTGPNGDLPPRPACAPQWHRPLLTAMPD
CHHHHHHHHHHCHHHHHCCCEEEEEEECEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
LKLALLVGGYAQRYYLDVPRGMPLTEVVRRGPVRDAEGRVLFPLPHPSPRNLAWFKHNPW
CEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCC
FDAQIVPRLRAALAAAFV
CCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AEAAFASCLHDIRACRLCEGALPHEPRPVVLADRRARVLIVGQAPGRIVHETGIPWNDR
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEECCCCCCCC
SGDRLREWLRIGYDAFYADRRIAVVPMGFCFPGTGPNGDLPPRPACAPQWHRPLLTAMPD
CHHHHHHHHHHCHHHHHCCCEEEEEEECEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
LKLALLVGGYAQRYYLDVPRGMPLTEVVRRGPVRDAEGRVLFPLPHPSPRNLAWFKHNPW
CEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCC
FDAQIVPRLRAALAAAFV
CCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]