| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is bcp [H]
Identifier: 17546036
GI number: 17546036
Start: 1402659
End: 1403123
Strand: Reverse
Name: bcp [H]
Synonym: RSc1317
Alternate gene names: 17546036
Gene position: 1403123-1402659 (Counterclockwise)
Preceding gene: 17546037
Following gene: 17546035
Centisome position: 37.75
GC content: 64.73
Gene sequence:
>465_bases ATGCCCGTCACGCTCGACCAGCCTCTCCCCGACTTCTCCGCGCCGGCCACCAGCGGCCTCACGTTCTCGCTGGCCGGGCA GCGCGGCAAGGTCGTGGTGCTGTATTTCTACCCGAAGGACAACACGCCCGGCTGCACCACCGAGGCCATGAACTTCCGTG ACCAGTACGACGCATTCGAGGCCGCCGATGCCGTGGTGTTCGGCATCTCCCGCGACAGCCTGAAGTCGCACGAGAACTTC AAGGCCAAGCTGGAACTGCCCTTCGAGCTGCTCTCCGATGCCGACGAGGCGGTCTGCGCGCTCTTCGACACCATCAAGAT GAAAAAGATGTACGGCAAGGACGTCCGGGGTATCGAGCGCAGCACCTTCCTGATCGACCGCAAGGGCGTACTGCGCCAGG AATGGCGCGGCGTCAAGGTGCCCAACCACGTGGACGAAGTGCTGGGGGCGGTCCGCGCGCTGTAG
Upstream 100 bases:
>100_bases GCCGTCACGGACGGCTTGCCGGGAGGCTCCAGGGTCCAGGTCCTTGCCGTTTCAACTTCGCCGTACCACGTCTTTACCCG CGGTCTTCCGGAACACCATC
Downstream 100 bases:
>100_bases CCGATCGCGCACGGAAGCGTCCGCCAAGCCACGCCGGCGCTGGCTTTCCCGCCGGTTTCGCGCGGCCGCAACGCGAGATC GGCCGTCACATCCGGCCGAT
Product: bacterioferritin comigratory oxidoreductase
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MPVTLDQPLPDFSAPATSGLTFSLAGQRGKVVVLYFYPKDNTPGCTTEAMNFRDQYDAFEAADAVVFGISRDSLKSHENF KAKLELPFELLSDADEAVCALFDTIKMKKMYGKDVRGIERSTFLIDRKGVLRQEWRGVKVPNHVDEVLGAVRAL
Sequences:
>Translated_154_residues MPVTLDQPLPDFSAPATSGLTFSLAGQRGKVVVLYFYPKDNTPGCTTEAMNFRDQYDAFEAADAVVFGISRDSLKSHENF KAKLELPFELLSDADEAVCALFDTIKMKKMYGKDVRGIERSTFLIDRKGVLRQEWRGVKVPNHVDEVLGAVRAL >Mature_153_residues PVTLDQPLPDFSAPATSGLTFSLAGQRGKVVVLYFYPKDNTPGCTTEAMNFRDQYDAFEAADAVVFGISRDSLKSHENFK AKLELPFELLSDADEAVCALFDTIKMKKMYGKDVRGIERSTFLIDRKGVLRQEWRGVKVPNHVDEVLGAVRAL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=143, Percent_Identity=39.8601398601399, Blast_Score=100, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6322180, Length=97, Percent_Identity=39.1752577319588, Blast_Score=73, Evalue=2e-14, Organism=Drosophila melanogaster, GI17738015, Length=163, Percent_Identity=34.9693251533742, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17163; Mature: 17032
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTLDQPLPDFSAPATSGLTFSLAGQRGKVVVLYFYPKDNTPGCTTEAMNFRDQYDAFE CCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCHHHHCCHHHHHHHH AADAVVFGISRDSLKSHENFKAKLELPFELLSDADEAVCALFDTIKMKKMYGKDVRGIER HCCEEEEECCHHHHHCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC STFLIDRKGVLRQEWRGVKVPNHVDEVLGAVRAL CEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure PVTLDQPLPDFSAPATSGLTFSLAGQRGKVVVLYFYPKDNTPGCTTEAMNFRDQYDAFE CCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCHHHHCCHHHHHHHH AADAVVFGISRDSLKSHENFKAKLELPFELLSDADEAVCALFDTIKMKKMYGKDVRGIER HCCEEEEECCHHHHHCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC STFLIDRKGVLRQEWRGVKVPNHVDEVLGAVRAL CEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]