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The map label for this gene is scpB [H]

Identifier: 17546004

GI number: 17546004

Start: 1366856

End: 1367770

Strand: Direct

Name: scpB [H]

Synonym: RSc1285

Alternate gene names: 17546004

Gene position: 1366856-1367770 (Clockwise)

Preceding gene: 17546003

Following gene: 17546005

Centisome position: 36.78

GC content: 68.2

Gene sequence:

>915_bases
ATGAATACCCAAGAGGCGAAAATCGTCCTCGAGACCGCGCTGATCTGCGCGCAGGATCCGTTGCGAGTCAGCGACTTGCG
TAAGCTGTTCGACGAAGACGTCTCGGCAGACACTATCCGTGTGCTGCTTGAAGAGTTGCGCCAGGACTGGCTCGACCGCG
GTGTGGAGCTGGTGGCGCTGGCTTCGGGCTGGCGCTTGCAGAGCCGGCCGGAAATGCGGGCCTATCTCGATCGCCTGCAT
CCGGAAAAGCCGCCCAAGTACTCGCGTGCCGTGATGGAGACGCTGGCCATCATCGCCTATCGCCAGCCTGTCACGCGGGG
CGATATCGAAGACATCCGCGGCGTGACGGTCAACACCCAGGTCATCAAGCAGATCGAGGACCGCGGCTGGGTCGAGGTGA
TCGGCCATCGCGATGTGCCCGGCCGGCCGGCGCTGTATGCCACCACCAAGCAGTTTCTCGACGATCTTGGCCTGCGCTCG
CTCGACGAGCTGCCGCCGCTCGAAGACGCCCGGGCCCAGGCCCAGGCCAGCCTGCTGGAGCAGGGCGCGATCGAATTCGA
GGGCGGCACGGTCTCCGTCGAAGCGCTGACCGCCATGGTCGATCACGCGAGCGCCGACGCTGCCCCCGCGGAGGGGGCTG
CGTCGGCGCCGGCCGGCGATGCGGCCGCACCGGCAGGGGATGCCGTGCCGGAGGTTGCGGAAGCATCGGCGATGGCTTCG
GCCGTCGGACGGCTCGGCGCGCAAGTCGCGGCGGATGCGGCGTCGCCCGAGGTGGAGCCGCATGCGGTTGTCGATGTCGC
CGCAACGGAGCTTCCGGTGGCTCGAGCCGAAGGCGAGGTGCCGACGGCCGCCGCCGAATCCCACGCCACGCCGGAAGGTG
ACCGCAAGGCGGCTACCGGCAACGAACATCCATAG

Upstream 100 bases:

>100_bases
GCAGCAGCATATTCAGCATGCCGCGTAATCGCGGCGGAACGGAAACTTTCAAGCGTGACGGCATGTGCCGTGCGCGAGCA
ATGACGAGCCGCTCAACCCG

Downstream 100 bases:

>100_bases
GCCGTGTCTGCCGCGCGACCGGTGCATGGCCTGAACCCCTTTTTGATCTGAATGACGCTGTGAGTACCCTGCCAGATTCC
ATGGATACACGTATGTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MNTQEAKIVLETALICAQDPLRVSDLRKLFDEDVSADTIRVLLEELRQDWLDRGVELVALASGWRLQSRPEMRAYLDRLH
PEKPPKYSRAVMETLAIIAYRQPVTRGDIEDIRGVTVNTQVIKQIEDRGWVEVIGHRDVPGRPALYATTKQFLDDLGLRS
LDELPPLEDARAQAQASLLEQGAIEFEGGTVSVEALTAMVDHASADAAPAEGAASAPAGDAAAPAGDAVPEVAEASAMAS
AVGRLGAQVAADAASPEVEPHAVVDVAATELPVARAEGEVPTAAAESHATPEGDRKAATGNEHP

Sequences:

>Translated_304_residues
MNTQEAKIVLETALICAQDPLRVSDLRKLFDEDVSADTIRVLLEELRQDWLDRGVELVALASGWRLQSRPEMRAYLDRLH
PEKPPKYSRAVMETLAIIAYRQPVTRGDIEDIRGVTVNTQVIKQIEDRGWVEVIGHRDVPGRPALYATTKQFLDDLGLRS
LDELPPLEDARAQAQASLLEQGAIEFEGGTVSVEALTAMVDHASADAAPAEGAASAPAGDAAAPAGDAVPEVAEASAMAS
AVGRLGAQVAADAASPEVEPHAVVDVAATELPVARAEGEVPTAAAESHATPEGDRKAATGNEHP
>Mature_304_residues
MNTQEAKIVLETALICAQDPLRVSDLRKLFDEDVSADTIRVLLEELRQDWLDRGVELVALASGWRLQSRPEMRAYLDRLH
PEKPPKYSRAVMETLAIIAYRQPVTRGDIEDIRGVTVNTQVIKQIEDRGWVEVIGHRDVPGRPALYATTKQFLDDLGLRS
LDELPPLEDARAQAQASLLEQGAIEFEGGTVSVEALTAMVDHASADAAPAEGAASAPAGDAAAPAGDAVPEVAEASAMAS
AVGRLGAQVAADAASPEVEPHAVVDVAATELPVARAEGEVPTAAAESHATPEGDRKAATGNEHP

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 32278; Mature: 32278

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQEAKIVLETALICAQDPLRVSDLRKLFDEDVSADTIRVLLEELRQDWLDRGVELVAL
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
ASGWRLQSRPEMRAYLDRLHPEKPPKYSRAVMETLAIIAYRQPVTRGDIEDIRGVTVNTQ
ECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEHHH
VIKQIEDRGWVEVIGHRDVPGRPALYATTKQFLDDLGLRSLDELPPLEDARAQAQASLLE
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHH
QGAIEFEGGTVSVEALTAMVDHASADAAPAEGAASAPAGDAAAPAGDAVPEVAEASAMAS
HCCEEECCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AVGRLGAQVAADAASPEVEPHAVVDVAATELPVARAEGEVPTAAAESHATPEGDRKAATG
HHHHHHHHHHHHCCCCCCCCHHHEEHHHHHCCHHHCCCCCCCHHHHCCCCCCCCCCCCCC
NEHP
CCCC
>Mature Secondary Structure
MNTQEAKIVLETALICAQDPLRVSDLRKLFDEDVSADTIRVLLEELRQDWLDRGVELVAL
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
ASGWRLQSRPEMRAYLDRLHPEKPPKYSRAVMETLAIIAYRQPVTRGDIEDIRGVTVNTQ
ECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEHHH
VIKQIEDRGWVEVIGHRDVPGRPALYATTKQFLDDLGLRSLDELPPLEDARAQAQASLLE
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHH
QGAIEFEGGTVSVEALTAMVDHASADAAPAEGAASAPAGDAAAPAGDAVPEVAEASAMAS
HCCEEECCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AVGRLGAQVAADAASPEVEPHAVVDVAATELPVARAEGEVPTAAAESHATPEGDRKAATG
HHHHHHHHHHHHCCCCCCCCHHHEEHHHHHCCHHHCCCCCCCHHHHCCCCCCCCCCCCCC
NEHP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]