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The map label for this gene is 17546003

Identifier: 17546003

GI number: 17546003

Start: 1365633

End: 1366379

Strand: Direct

Name: 17546003

Synonym: RSc1284

Alternate gene names: NA

Gene position: 1365633-1366379 (Clockwise)

Preceding gene: 17546001

Following gene: 17546004

Centisome position: 36.75

GC content: 68.14

Gene sequence:

>747_bases
ATGAGTGCGGCAGCATTATTGAGTGTCTTTCTGATTGCGTTGCTCGGCGGCGTGCATTGCCTTGCCATGTGCAGCGGTAT
TGCGCTTGCCGCGGAGCGCGCGCAGCCTGCCGTGCGCATCGTTTCGCGTCGCCGGCTGTGGTTCGAGCAACTGGTGATGC
ATCTGGGGCGGCTCACCACTTACGCGCTGCTCGGGGCCGCGATGGGCGCACTCGGCGCGACGGTGTGGCGGCAGCAGTGG
CTGCCCATCCAGCGTGGCCTGTTTGCGTTGGCGAGCGCGCTGTTGCTCGCCTATGGGTTGCTTCTGCTGTCGCGCACGGC
TGCCGATGTCTGGCGTGGCGCCTGGCTCGAACGCATACTTGGGCGCCTGTCCGGCGGGCTGGCGGCCGTTGCCTCGGGGG
TGCGCGCGTCGTCGCTGCGTGCGCGTTTTCCGTTGGCGGGCCGGTATCTGACCGGGCTGGCCTGGGGGCTGGTGCCTTGT
GGCATGGTCTATGGCGCGCTGGCCGTCGCGTTGCTGGCGGGCAACGCGGCATCGGGGGCGGTGGTCATGCTGGCGTTCGG
CGCGGGCACGCTGCCGAACCTGCTGATGATGTCGGGCGTGGCCGGATGGTTGCGTGGCGTGTCGCGGATGCGCTGGGCTC
GCGGTGTCGCGGGCATCGGAATCGCCGCATTCGGCATCTGGGGACTCGTGTGTGCCGCGTGGCTGCCCGAGATGCTCAAC
GCACATGGATTCTGCCTGGTACTTTGA

Upstream 100 bases:

>100_bases
CTGTTATCGGCGGTCTTCGATGTTCAGTTTTAAGAGAATTTCATTTGAACTACGACAGCAATCCTCCACGATTTGCGCCG
GTTCGGTCGAGGCCCGGTTC

Downstream 100 bases:

>100_bases
CCCTTTGGCCCGACATCAGGGGCGGCGGTGCTGCCGGCTTTGCGGTTAGGCGATATTCCCGGTTGCGGCCGCGCCGGAAT
ATGGCCTACAATCAACCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Inner Membrane Lipoprotein; Integral Membrane Protein

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSAAALLSVFLIALLGGVHCLAMCSGIALAAERAQPAVRIVSRRRLWFEQLVMHLGRLTTYALLGAAMGALGATVWRQQW
LPIQRGLFALASALLLAYGLLLLSRTAADVWRGAWLERILGRLSGGLAAVASGVRASSLRARFPLAGRYLTGLAWGLVPC
GMVYGALAVALLAGNAASGAVVMLAFGAGTLPNLLMMSGVAGWLRGVSRMRWARGVAGIGIAAFGIWGLVCAAWLPEMLN
AHGFCLVL

Sequences:

>Translated_248_residues
MSAAALLSVFLIALLGGVHCLAMCSGIALAAERAQPAVRIVSRRRLWFEQLVMHLGRLTTYALLGAAMGALGATVWRQQW
LPIQRGLFALASALLLAYGLLLLSRTAADVWRGAWLERILGRLSGGLAAVASGVRASSLRARFPLAGRYLTGLAWGLVPC
GMVYGALAVALLAGNAASGAVVMLAFGAGTLPNLLMMSGVAGWLRGVSRMRWARGVAGIGIAAFGIWGLVCAAWLPEMLN
AHGFCLVL
>Mature_247_residues
SAAALLSVFLIALLGGVHCLAMCSGIALAAERAQPAVRIVSRRRLWFEQLVMHLGRLTTYALLGAAMGALGATVWRQQWL
PIQRGLFALASALLLAYGLLLLSRTAADVWRGAWLERILGRLSGGLAAVASGVRASSLRARFPLAGRYLTGLAWGLVPCG
MVYGALAVALLAGNAASGAVVMLAFGAGTLPNLLMMSGVAGWLRGVSRMRWARGVAGIGIAAFGIWGLVCAAWLPEMLNA
HGFCLVL

Specific function: Unknown

COG id: COG2836

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25952; Mature: 25820

Theoretical pI: Translated: 12.03; Mature: 12.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEEC
>Mature Secondary Structure 
SAAALLSVFLIALLGGVHCLAMCSGIALAAERAQPAVRIVSRRRLWFEQLVMHLGRLTT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YALLGAAMGALGATVWRQQWLPIQRGLFALASALLLAYGLLLLSRTAADVWRGAWLERIL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRLSGGLAAVASGVRASSLRARFPLAGRYLTGLAWGLVPCGMVYGALAVALLAGNAASGA
HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VVMLAFGAGTLPNLLMMSGVAGWLRGVSRMRWARGVAGIGIAAFGIWGLVCAAWLPEMLN
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AHGFCLVL
CCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA