| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545976
Identifier: 17545976
GI number: 17545976
Start: 1335838
End: 1336314
Strand: Reverse
Name: 17545976
Synonym: RSc1257
Alternate gene names: NA
Gene position: 1336314-1335838 (Counterclockwise)
Preceding gene: 17545981
Following gene: 17545969
Centisome position: 35.96
GC content: 72.75
Gene sequence:
>477_bases ATGACCGCCACCACGCCTACCCGCGAAGCCCTGCTCGATGCCGCCGCCGCGCGCCGCGAAGCCGGCCAGTTGCCGTACTT CGGTGCCCTGACGCCCGAAGAGACCGCCGCGCTGCTTGCCGCCGATCCGCAGGCCCGCCTGGTGGACGTGCGCACCCGCG CCGAGCTGGACTGGGTCGGGGCGCCGCAGGTCCCGGCCGGCCAGTTCGTCCATGTGGAATGGAACCGGTATCCGGGCGGC GTGCGCAACCCGGACTTCCTGGCTGAACTGGAAGCCGCCGTGCCGAAGGATGCGCCGGTGCTGTTCCTGTGCCGCAGCGC CGCGCGCTCCAAGCACGCGGCCGCCGCCGCGACGCAGGCCGGCTATGCGCTGGCGATGGATGTGCTGGAAGGCTTCGAAG GCGCCAAGGATGCCGCGGGCCACCGCAAGACCGTGGAAGGCTGGTGCTTCCGCGGCCTGCCGTGGCAAGGCGCCTGA
Upstream 100 bases:
>100_bases TATTTGTGCCCACCCCATCTTTTTGCACCAATCACGGGAAACCCCGCCGTCCGCTGCTGTGGCGGCATTAAAATGCGGCT TTTCCACCCCACCGATTGCC
Downstream 100 bases:
>100_bases CGGGAACGTCCCCAGTCTGCCGCGCGGCGCGCTCCCGGCCCGCGAGATTCGCCACGCGCGTCGGCGGCGGCGCCGTGCGG GCACGCTCCGGGCGCCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Sulfide Dehydrogenase; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Domain Protein; Sulfurtransferase Protein; Rhodanese/Cdc25 Fold; Rhodanese-Like Domain-Containing Protein; Sulfate Permease Andrelated Transporter; Rhodanese-Like Sulfurtransferase
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTATTPTREALLDAAAARREAGQLPYFGALTPEETAALLAADPQARLVDVRTRAELDWVGAPQVPAGQFVHVEWNRYPGG VRNPDFLAELEAAVPKDAPVLFLCRSAARSKHAAAAATQAGYALAMDVLEGFEGAKDAAGHRKTVEGWCFRGLPWQGA
Sequences:
>Translated_158_residues MTATTPTREALLDAAAARREAGQLPYFGALTPEETAALLAADPQARLVDVRTRAELDWVGAPQVPAGQFVHVEWNRYPGG VRNPDFLAELEAAVPKDAPVLFLCRSAARSKHAAAAATQAGYALAMDVLEGFEGAKDAAGHRKTVEGWCFRGLPWQGA >Mature_157_residues TATTPTREALLDAAAARREAGQLPYFGALTPEETAALLAADPQARLVDVRTRAELDWVGAPQVPAGQFVHVEWNRYPGGV RNPDFLAELEAAVPKDAPVLFLCRSAARSKHAAAAATQAGYALAMDVLEGFEGAKDAAGHRKTVEGWCFRGLPWQGA
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16839; Mature: 16708
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATTPTREALLDAAAARREAGQLPYFGALTPEETAALLAADPQARLVDVRTRAELDWVG CCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCHHHEEEEECCCCCEEEEEECCCCCCCCC APQVPAGQFVHVEWNRYPGGVRNPDFLAELEAAVPKDAPVLFLCRSAARSKHAAAAATQA CCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHC GYALAMDVLEGFEGAKDAAGHRKTVEGWCFRGLPWQGA CHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure TATTPTREALLDAAAARREAGQLPYFGALTPEETAALLAADPQARLVDVRTRAELDWVG CCCCCHHHHHHHHHHHHHHCCCCCEECCCCCHHHEEEEECCCCCEEEEEECCCCCCCCC APQVPAGQFVHVEWNRYPGGVRNPDFLAELEAAVPKDAPVLFLCRSAARSKHAAAAATQA CCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHC GYALAMDVLEGFEGAKDAAGHRKTVEGWCFRGLPWQGA CHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA