| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is mocB [H]
Identifier: 17545960
GI number: 17545960
Start: 1315847
End: 1316776
Strand: Direct
Name: mocB [H]
Synonym: RSc1241
Alternate gene names: 17545960
Gene position: 1315847-1316776 (Clockwise)
Preceding gene: 17545953
Following gene: 17545961
Centisome position: 35.41
GC content: 64.52
Gene sequence:
>930_bases ATGAAGAACACGCTGATGGCCGCCGCCGCGGCCGCCGCCATTCTTGCCACGCCGCTGGCGCACGCCGAGAAGATCGGCGT GGCGATGGCGCTCTTCGACGACACGGGCCTGACCATTCTGCGCAACGGCATCGCCGACACGGCGAAGAAGCATGGCGCGA CCGTCCAGATCGAGGATGCCGGCAACGACGTCGGCAAGCAACTCAGTCAGGTCCAGAACATGATTGCGCAGAAGGTCGAC GCGATCATCGTCAACCCGGTCGACACCGACGCGACGCCCAAGATCACGAGGATGGTGACCGAGGCGAAGATCCCCCTGGT CTACGTGAATCGCAAGCCGGTGGATTTCGACAAACTGCCGGCCGGCGTGGCGGTGGTGGCGTCCGACGAGCGGCTCTCGG GCACGCTGCAGGCCCGGCAGGTGTGCAAGCTGCTCGGCGGCAAGGGCGATCTCCTGGTGCTGATGGGCGAGCTCTCCAAT GAATCGGCGCGCGCCCGGACCAAGGACATCGAGGACGTGATCGCGACCAACGCGTGTGCCGGCATGAAGATCGTCGACAA GCGCGAAGGCAGGTGGAGCCGTACGCTGGGCCAGGACATCACGATGAACTGGCTGAGCACGGGCATGAAGTTCGACGCGA TCGTCTCGAACAACGACGAAATGGCGATCGGTGCGATCAATGCCTTGAAGTCGGCCAGGAAGTGGACGCCGAAGACCATC GTGGCCGGCATCGACGCCACCCCCGACGGGCTCGCCTCGATGCGCAGCGGAGACCTGAAGGTTTCTGTCTTCCAGAACCT GCCCGGGCAGGGCGCAGCGGCGATCGATGCAGCGATCAAGCTGGCGAAGAAGCAGCCGGTGGAGCGCTTCGTGAACGTGC CGTTCGAGCTCGTCACGCCAGAGAACCTGACCCAGTACGCCAAGCACTGA
Upstream 100 bases:
>100_bases GAACTAGAGTTTCGTCCTGAAGCCCAGGCTTGATCCGGGGCTTGGCATGGCGGTGCATCGAACACCGCCTTTCGCCCCAA GACAAGGAGACTGATTCATC
Downstream 100 bases:
>100_bases CCCACGATTGCCGCAGCCGCGCAGGCATGCCATGCGCCGGCCCGCACTCGCCTTCCGAGGAGCGTCCATGTCCATAGCCG TGTTGGATCGGCCGATGTCC
Product: rhizopine-binding precursor signal peptide protein
Products: ADP; phosphate; ribose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKNTLMAAAAAAAILATPLAHAEKIGVAMALFDDTGLTILRNGIADTAKKHGATVQIEDAGNDVGKQLSQVQNMIAQKVD AIIVNPVDTDATPKITRMVTEAKIPLVYVNRKPVDFDKLPAGVAVVASDERLSGTLQARQVCKLLGGKGDLLVLMGELSN ESARARTKDIEDVIATNACAGMKIVDKREGRWSRTLGQDITMNWLSTGMKFDAIVSNNDEMAIGAINALKSARKWTPKTI VAGIDATPDGLASMRSGDLKVSVFQNLPGQGAAAIDAAIKLAKKQPVERFVNVPFELVTPENLTQYAKH
Sequences:
>Translated_309_residues MKNTLMAAAAAAAILATPLAHAEKIGVAMALFDDTGLTILRNGIADTAKKHGATVQIEDAGNDVGKQLSQVQNMIAQKVD AIIVNPVDTDATPKITRMVTEAKIPLVYVNRKPVDFDKLPAGVAVVASDERLSGTLQARQVCKLLGGKGDLLVLMGELSN ESARARTKDIEDVIATNACAGMKIVDKREGRWSRTLGQDITMNWLSTGMKFDAIVSNNDEMAIGAINALKSARKWTPKTI VAGIDATPDGLASMRSGDLKVSVFQNLPGQGAAAIDAAIKLAKKQPVERFVNVPFELVTPENLTQYAKH >Mature_309_residues MKNTLMAAAAAAAILATPLAHAEKIGVAMALFDDTGLTILRNGIADTAKKHGATVQIEDAGNDVGKQLSQVQNMIAQKVD AIIVNPVDTDATPKITRMVTEAKIPLVYVNRKPVDFDKLPAGVAVVASDERLSGTLQARQVCKLLGGKGDLLVLMGELSN ESARARTKDIEDVIATNACAGMKIVDKREGRWSRTLGQDITMNWLSTGMKFDAIVSNNDEMAIGAINALKSARKWTPKTI VAGIDATPDGLASMRSGDLKVSVFQNLPGQGAAAIDAAIKLAKKQPVERFVNVPFELVTPENLTQYAKH
Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism. Could be involved in its high affinity transport [H]
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790192, Length=299, Percent_Identity=26.4214046822742, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1788473, Length=343, Percent_Identity=28.2798833819242, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1790674, Length=241, Percent_Identity=28.2157676348548, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789990, Length=298, Percent_Identity=25.503355704698, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001761 [H]
Pfam domain/function: PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 32896; Mature: 32896
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTLMAAAAAAAILATPLAHAEKIGVAMALFDDTGLTILRNGIADTAKKHGATVQIEDA CCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECC GNDVGKQLSQVQNMIAQKVDAIIVNPVDTDATPKITRMVTEAKIPLVYVNRKPVDFDKLP CCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHCC AGVAVVASDERLSGTLQARQVCKLLGGKGDLLVLMGELSNESARARTKDIEDVIATNACA CCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC GMKIVDKREGRWSRTLGQDITMNWLSTGMKFDAIVSNNDEMAIGAINALKSARKWTPKTI CCEEEECCCCCHHHHCCCCHHHHHHHCCCEEEEEECCCCCEEEHHHHHHHHHHCCCCCCE VAGIDATPDGLASMRSGDLKVSVFQNLPGQGAAAIDAAIKLAKKQPVERFVNVPFELVTP EEECCCCCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHCCCEEEECC ENLTQYAKH HHHHHHHCC >Mature Secondary Structure MKNTLMAAAAAAAILATPLAHAEKIGVAMALFDDTGLTILRNGIADTAKKHGATVQIEDA CCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECC GNDVGKQLSQVQNMIAQKVDAIIVNPVDTDATPKITRMVTEAKIPLVYVNRKPVDFDKLP CCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHCC AGVAVVASDERLSGTLQARQVCKLLGGKGDLLVLMGELSNESARARTKDIEDVIATNACA CCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC GMKIVDKREGRWSRTLGQDITMNWLSTGMKFDAIVSNNDEMAIGAINALKSARKWTPKTI CCEEEECCCCCHHHHCCCCHHHHHHHCCCEEEEEECCCCCEEEHHHHHHHHHHCCCCCCE VAGIDATPDGLASMRSGDLKVSVFQNLPGQGAAAIDAAIKLAKKQPVERFVNVPFELVTP EEECCCCCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHHCCCEEEECC ENLTQYAKH HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ribose [Periplasm]; H2O [C]
Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]