| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is pucI [H]
Identifier: 17545952
GI number: 17545952
Start: 1304554
End: 1306062
Strand: Direct
Name: pucI [H]
Synonym: RSc1233
Alternate gene names: 17545952
Gene position: 1304554-1306062 (Clockwise)
Preceding gene: 17545951
Following gene: 17545953
Centisome position: 35.1
GC content: 67.53
Gene sequence:
>1509_bases ATGAAGCCGACAGCGCAACCCGCCGATGCCCAGCCGGGCGCGGCGCACGGCAGCCGTCTCTACAACGACGATCTGGCGCC GACCGGGGCAGCGCAGCGCACCTGGAAGTGGTATCACTTCGCGGCGCTGTGGGTCGGCATGGTGATGAACATCGCCTCGT ACATGCTGGCGGCCGGACTGACGGAGCAGGGCATGTCGCCGTGGCAGGCGGTGCTGACGGTGTTGCTGGGCAACGCCATC GTGCTGGTGCCGATGTTGCTGATCGGCCATGCGGGGGCCAAGCACGGCATTCCGTACGCGGTGCTGGTGCGCACCTCGTT CGGCACGCAGGGGGCGAAGCTGCCGGCGCTGCTGCGCGCCATCGTCGCGTGCGGCTGGTATGGCATCCAGACCTGGCTGG GCGGCAGCGCCATCCATACGCTGCTCAACATCCTGACCGGCAATGCGCTGCACGGTGCGCCGCTGCCGCTGCTGGACATC TCCGTCGCACAGCTGGCCTGCTTCCTGCTGTTCTGGGCGCTGCAGCTGTACTTCATCGTGCACGGCACTGACTCGATCCG CTGGCTGGAGAGCTGGTCGGCGCCGATCAAGATCGTGATGTGCATCGCGCTGGTGTGGTGGGTCACCGCGAAGGCGGGCG GGGTCGGCTCGATGCTGTCGGCGCCGTCGCAGTTCACGGCGGGCGGCAAGAAGGCCGGGCTGTTCTGGGCGACCTTCTGG CCGAGCCTGACGGCGATGGTCGGCTTCTGGGCGACGCTGGCGCTGAACATTCCGGACTTCACACGCTTCGCCAGATCGCA GCGGGACCAGGTGGTGGGCCAGTCGATCGGGCTGCCGGTGCCGATGGCGCTGCTGTCGGTGATCTCGGTGGTGGTGACCT CGGCCACGGTGGTGATCTACGGCCAGGCGGTCTGGGACCCGATCGACCTGACCAGCCGCATGACGGGCATCGGCGTGGGC ATCGCGCTGGTGATCCTGACGCTGGACACCATGTGCTGCAACCTGGCCGCCAACCTGGTGGGGCCGGCCTACGATTTCTC CAGCCTGTGGCCGAAGGGCATCTCGTACAAGACGGGCGGGCTCATCACCGCGACCATCGCCATCGTGATGATGCCGTGGA AGATCCTGGCCACCACGCAGGGCTACATCTTCACGTGGCTGGTCGGCTATTCGGCGCTGCTGGGGCCGGTGGCGGGGATC ATGATGGTCGACTACCTCCTGATTCGCGGCACGCGGCTCGAGCCACGCGCGCTGTTCGACGAGCGCGGCGAGTATGCCTA CACCGGCGGCTGGAACCTCGGCGCGGTGGCGGCGCTGGCGGTGGGCGTGCTGCCCAATCTGCCCGGCTTTCTGCATACCG CGTTTCCGGCGTCGTTCCCGAACGTGCCGGCGTTCTTCAATACGCTCTACACCTATGCGTGGTTCGTCGGGCTGGTGCTG GCGTCCATTGTCTATGGCGCGTGGATGAAGCTGCGCGGCAGTCCGCGTGCGCGCGTGGCAAGCGCCTGA
Upstream 100 bases:
>100_bases GTGCTTGACCGGATGGACGCATCCCCGTGGTTTTTGCTATCTACACATGAGCCTGACGCGCGCCGCAGCGCCCGCGCCCA ACATCCGTGGAGGTTTTTGA
Downstream 100 bases:
>100_bases GCTGCCCGCCGCCGCCTGCGCGCGGATCTTCGCAAGGGCATCACGGGATGCTCCGCGCTGCGTCACCATGCACCCGCGTG CAATACGTCGGGGATGGTCG
Product: transporter transmembrane protein
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MKPTAQPADAQPGAAHGSRLYNDDLAPTGAAQRTWKWYHFAALWVGMVMNIASYMLAAGLTEQGMSPWQAVLTVLLGNAI VLVPMLLIGHAGAKHGIPYAVLVRTSFGTQGAKLPALLRAIVACGWYGIQTWLGGSAIHTLLNILTGNALHGAPLPLLDI SVAQLACFLLFWALQLYFIVHGTDSIRWLESWSAPIKIVMCIALVWWVTAKAGGVGSMLSAPSQFTAGGKKAGLFWATFW PSLTAMVGFWATLALNIPDFTRFARSQRDQVVGQSIGLPVPMALLSVISVVVTSATVVIYGQAVWDPIDLTSRMTGIGVG IALVILTLDTMCCNLAANLVGPAYDFSSLWPKGISYKTGGLITATIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAGI MMVDYLLIRGTRLEPRALFDERGEYAYTGGWNLGAVAALAVGVLPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLVL ASIVYGAWMKLRGSPRARVASA
Sequences:
>Translated_502_residues MKPTAQPADAQPGAAHGSRLYNDDLAPTGAAQRTWKWYHFAALWVGMVMNIASYMLAAGLTEQGMSPWQAVLTVLLGNAI VLVPMLLIGHAGAKHGIPYAVLVRTSFGTQGAKLPALLRAIVACGWYGIQTWLGGSAIHTLLNILTGNALHGAPLPLLDI SVAQLACFLLFWALQLYFIVHGTDSIRWLESWSAPIKIVMCIALVWWVTAKAGGVGSMLSAPSQFTAGGKKAGLFWATFW PSLTAMVGFWATLALNIPDFTRFARSQRDQVVGQSIGLPVPMALLSVISVVVTSATVVIYGQAVWDPIDLTSRMTGIGVG IALVILTLDTMCCNLAANLVGPAYDFSSLWPKGISYKTGGLITATIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAGI MMVDYLLIRGTRLEPRALFDERGEYAYTGGWNLGAVAALAVGVLPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLVL ASIVYGAWMKLRGSPRARVASA >Mature_502_residues MKPTAQPADAQPGAAHGSRLYNDDLAPTGAAQRTWKWYHFAALWVGMVMNIASYMLAAGLTEQGMSPWQAVLTVLLGNAI VLVPMLLIGHAGAKHGIPYAVLVRTSFGTQGAKLPALLRAIVACGWYGIQTWLGGSAIHTLLNILTGNALHGAPLPLLDI SVAQLACFLLFWALQLYFIVHGTDSIRWLESWSAPIKIVMCIALVWWVTAKAGGVGSMLSAPSQFTAGGKKAGLFWATFW PSLTAMVGFWATLALNIPDFTRFARSQRDQVVGQSIGLPVPMALLSVISVVVTSATVVIYGQAVWDPIDLTSRMTGIGVG IALVILTLDTMCCNLAANLVGPAYDFSSLWPKGISYKTGGLITATIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAGI MMVDYLLIRGTRLEPRALFDERGEYAYTGGWNLGAVAALAVGVLPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLVL ASIVYGAWMKLRGSPRARVASA
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=481, Percent_Identity=29.3139293139293, Blast_Score=194, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6319429, Length=499, Percent_Identity=27.4549098196393, Blast_Score=192, Evalue=9e-50, Organism=Saccharomyces cerevisiae, GI6322219, Length=453, Percent_Identity=27.3730684326711, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6319495, Length=457, Percent_Identity=26.4770240700219, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6324645, Length=444, Percent_Identity=24.7747747747748, Blast_Score=143, Evalue=6e-35, Organism=Saccharomyces cerevisiae, GI6323266, Length=452, Percent_Identity=24.1150442477876, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6324766, Length=446, Percent_Identity=23.3183856502242, Blast_Score=127, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 53784; Mature: 53784
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTAQPADAQPGAAHGSRLYNDDLAPTGAAQRTWKWYHFAALWVGMVMNIASYMLAAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TEQGMSPWQAVLTVLLGNAIVLVPMLLIGHAGAKHGIPYAVLVRTSFGTQGAKLPALLRA HHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH IVACGWYGIQTWLGGSAIHTLLNILTGNALHGAPLPLLDISVAQLACFLLFWALQLYFIV HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHE HGTDSIRWLESWSAPIKIVMCIALVWWVTAKAGGVGSMLSAPSQFTAGGKKAGLFWATFW ECCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHCCCCCCCCEEHHHHH PSLTAMVGFWATLALNIPDFTRFARSQRDQVVGQSIGLPVPMALLSVISVVVTSATVVIY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEE GQAVWDPIDLTSRMTGIGVGIALVILTLDTMCCNLAANLVGPAYDFSSLWPKGISYKTGG ECHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCC LITATIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAGIMMVDYLLIRGTRLEPRALFD HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ERGEYAYTGGWNLGAVAALAVGVLPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLVL CCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ASIVYGAWMKLRGSPRARVASA HHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKPTAQPADAQPGAAHGSRLYNDDLAPTGAAQRTWKWYHFAALWVGMVMNIASYMLAAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TEQGMSPWQAVLTVLLGNAIVLVPMLLIGHAGAKHGIPYAVLVRTSFGTQGAKLPALLRA HHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH IVACGWYGIQTWLGGSAIHTLLNILTGNALHGAPLPLLDISVAQLACFLLFWALQLYFIV HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHE HGTDSIRWLESWSAPIKIVMCIALVWWVTAKAGGVGSMLSAPSQFTAGGKKAGLFWATFW ECCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHCCCCCCCCEEHHHHH PSLTAMVGFWATLALNIPDFTRFARSQRDQVVGQSIGLPVPMALLSVISVVVTSATVVIY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEE GQAVWDPIDLTSRMTGIGVGIALVILTLDTMCCNLAANLVGPAYDFSSLWPKGISYKTGG ECHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCC LITATIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAGIMMVDYLLIRGTRLEPRALFD HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ERGEYAYTGGWNLGAVAALAVGVLPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLVL CCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ASIVYGAWMKLRGSPRARVASA HHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]