Click here to switch to the map view.

The map label for this gene is yfgL [H]

Identifier: 17545937

GI number: 17545937

Start: 1287137

End: 1288303

Strand: Direct

Name: yfgL [H]

Synonym: RSc1218

Alternate gene names: 17545937

Gene position: 1287137-1288303 (Clockwise)

Preceding gene: 17545936

Following gene: 17545938

Centisome position: 34.63

GC content: 69.49

Gene sequence:

>1167_bases
ATGATTCACGCACTTGAGCAGGGTGGCGTCGCGCGTGCGGCGCGGGTGACGATGTTGGTGCTGGCCGCGGCCGCCGTGCT
GGGCGGCTGCTCGCTGTTCAGCAGCAAGAACAAGCACGAGCCCGCCAAGCTGCAGGCTGTCCAGCAGGTGCTGGCCGTGC
GCCAGGCGTGGAGCGTGGGCGTCGGCAAGAGCGGCCGCTACGTGATGCAGCCGGCCGTGGCCGGCAGCAACGTCTACGTC
TCGGCGGCCGGCGGCACGGTCACCGCGCTGGAAGGCGCGACCGGCCGCACCGTCTGGCAGGGCAAGGCCGGTGTCGACCT
GACTTCGGGCCCGGGCAGCGATGGCACCCTGACGGCCGTGGCCGGCGAGAAGGGCGCCGTCATTGCCTTCGATGACAAGG
GGGCGCAGAAGTGGAAGGCCTCGATCAACGGTGAAGTGCTGACCGCGCCGCTGGTCGGTCAGGGCCTGGTGGTGGTGCGC
ACCACTGATGGCCGCATCCTGGGGCTGGATGGTGCCAGCGGCGACCGCAAGTGGATCTACCAGCGTTCGCCGTCCGCACT
GAACCTGCGCAGCAGCCTGCCGATGGTCTTCGCCGGCGACAACGTCGTGCTGGGCTTTGCCGGCGGCAAGCTGGGCGCGG
TTGCGCTCAACAACGGCGCGCTGCGGTGGGAGGCCACGGTGTCGTATCCCCGCGGCGTGTCGGAGATCGAACGCCTGAAC
GACGTGACCGGCACCCCGTCGATCGACGGCCAGCAGGTGTGCGCCGTCAGCTTCCAGGGCCGCGTGGCGTGCTTCGACGT
CACGACCGGCGCTCCGCGCTGGGGCCGAGATTTCTCGTCGCCGACCGGCGTGACGCAGGAAGACGGCAATCTGTTCGCGG
CGGACGACAAGTCGATCGTCTACGGCTTCAACGCGCAGAACGGCGCCGACCTGTGGAAGAACGAGGCGCTGCTGTGGCGC
GAGCTGGGTGCGCCGCTGGCGTTCGGCCGCGCCGTGATCGTCGGCGATTTCGAAGGCTGGCTGCATTTCCTGTCGCGCGA
TGACGGCAAGTTCGTCGCGCGCGTGAAGACCGATGGCAGCGCCATCAGCGCCGCGCCGGTCGTGGTGGGCCAGACGCTGG
TCGTGCAGACGCGTGGTGGCGGCGTCTACGGCTACGTGCCGAAATAA

Upstream 100 bases:

>100_bases
CAGATTGTGCAATTCAAGCTGGATGCGCTGGGCGGCGCCTGATCGGCCCGCGCATCATCCGGCCTGCGCGATTCAACGCA
TAACAAAGGATTCCGATTTC

Downstream 100 bases:

>100_bases
GCGCAGGACGGCTTGCCGCGCGCCGCAGAGGCAGCGCCGGCAGGCGATTCATTTCCGGGGCGGCGCCGCCGTCCCATACC
GGCGCCCGCGACCATCGCGG

Product: lipoprotein transmembrane

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MIHALEQGGVARAARVTMLVLAAAAVLGGCSLFSSKNKHEPAKLQAVQQVLAVRQAWSVGVGKSGRYVMQPAVAGSNVYV
SAAGGTVTALEGATGRTVWQGKAGVDLTSGPGSDGTLTAVAGEKGAVIAFDDKGAQKWKASINGEVLTAPLVGQGLVVVR
TTDGRILGLDGASGDRKWIYQRSPSALNLRSSLPMVFAGDNVVLGFAGGKLGAVALNNGALRWEATVSYPRGVSEIERLN
DVTGTPSIDGQQVCAVSFQGRVACFDVTTGAPRWGRDFSSPTGVTQEDGNLFAADDKSIVYGFNAQNGADLWKNEALLWR
ELGAPLAFGRAVIVGDFEGWLHFLSRDDGKFVARVKTDGSAISAAPVVVGQTLVVQTRGGGVYGYVPK

Sequences:

>Translated_388_residues
MIHALEQGGVARAARVTMLVLAAAAVLGGCSLFSSKNKHEPAKLQAVQQVLAVRQAWSVGVGKSGRYVMQPAVAGSNVYV
SAAGGTVTALEGATGRTVWQGKAGVDLTSGPGSDGTLTAVAGEKGAVIAFDDKGAQKWKASINGEVLTAPLVGQGLVVVR
TTDGRILGLDGASGDRKWIYQRSPSALNLRSSLPMVFAGDNVVLGFAGGKLGAVALNNGALRWEATVSYPRGVSEIERLN
DVTGTPSIDGQQVCAVSFQGRVACFDVTTGAPRWGRDFSSPTGVTQEDGNLFAADDKSIVYGFNAQNGADLWKNEALLWR
ELGAPLAFGRAVIVGDFEGWLHFLSRDDGKFVARVKTDGSAISAAPVVVGQTLVVQTRGGGVYGYVPK
>Mature_388_residues
MIHALEQGGVARAARVTMLVLAAAAVLGGCSLFSSKNKHEPAKLQAVQQVLAVRQAWSVGVGKSGRYVMQPAVAGSNVYV
SAAGGTVTALEGATGRTVWQGKAGVDLTSGPGSDGTLTAVAGEKGAVIAFDDKGAQKWKASINGEVLTAPLVGQGLVVVR
TTDGRILGLDGASGDRKWIYQRSPSALNLRSSLPMVFAGDNVVLGFAGGKLGAVALNNGALRWEATVSYPRGVSEIERLN
DVTGTPSIDGQQVCAVSFQGRVACFDVTTGAPRWGRDFSSPTGVTQEDGNLFAADDKSIVYGFNAQNGADLWKNEALLWR
ELGAPLAFGRAVIVGDFEGWLHFLSRDDGKFVARVKTDGSAISAAPVVVGQTLVVQTRGGGVYGYVPK

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=378, Percent_Identity=30.1587301587302, Blast_Score=175, Evalue=4e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 40263; Mature: 40263

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHALEQGGVARAARVTMLVLAAAAVLGGCSLFSSKNKHEPAKLQAVQQVLAVRQAWSVG
CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
VGKSGRYVMQPAVAGSNVYVSAAGGTVTALEGATGRTVWQGKAGVDLTSGPGSDGTLTAV
CCCCCCEEEECEECCCEEEEEECCCEEEEECCCCCCEEECCCCCCEECCCCCCCCEEEEE
AGEKGAVIAFDDKGAQKWKASINGEVLTAPLVGQGLVVVRTTDGRILGLDGASGDRKWIY
ECCCCCEEEECCCCCHHHHHCCCCCEEEECCCCCCEEEEEECCCEEEEECCCCCCCEEEE
QRSPSALNLRSSLPMVFAGDNVVLGFAGGKLGAVALNNGALRWEATVSYPRGVSEIERLN
ECCCCEEEHHHCCCEEEECCCEEEEECCCCEEEEEECCCEEEEEEEECCCCCHHHHHHHH
DVTGTPSIDGQQVCAVSFQGRVACFDVTTGAPRWGRDFSSPTGVTQEDGNLFAADDKSIV
CCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEE
YGFNAQNGADLWKNEALLWRELGAPLAFGRAVIVGDFEGWLHFLSRDDGKFVARVKTDGS
EEECCCCCCHHHHCCCHHHHHHCCCHHHCCEEEEECHHHHHHHHCCCCCEEEEEEECCCC
AISAAPVVVGQTLVVQTRGGGVYGYVPK
CEEECEEEECCEEEEEECCCEEEEECCC
>Mature Secondary Structure
MIHALEQGGVARAARVTMLVLAAAAVLGGCSLFSSKNKHEPAKLQAVQQVLAVRQAWSVG
CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
VGKSGRYVMQPAVAGSNVYVSAAGGTVTALEGATGRTVWQGKAGVDLTSGPGSDGTLTAV
CCCCCCEEEECEECCCEEEEEECCCEEEEECCCCCCEEECCCCCCEECCCCCCCCEEEEE
AGEKGAVIAFDDKGAQKWKASINGEVLTAPLVGQGLVVVRTTDGRILGLDGASGDRKWIY
ECCCCCEEEECCCCCHHHHHCCCCCEEEECCCCCCEEEEEECCCEEEEECCCCCCCEEEE
QRSPSALNLRSSLPMVFAGDNVVLGFAGGKLGAVALNNGALRWEATVSYPRGVSEIERLN
ECCCCEEEHHHCCCEEEECCCEEEEECCCCEEEEEECCCEEEEEEEECCCCCHHHHHHHH
DVTGTPSIDGQQVCAVSFQGRVACFDVTTGAPRWGRDFSSPTGVTQEDGNLFAADDKSIV
CCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEE
YGFNAQNGADLWKNEALLWRELGAPLAFGRAVIVGDFEGWLHFLSRDDGKFVARVKTDGS
EEECCCCCCHHHHCCCHHHHHHCCCHHHCCEEEEECHHHHHHHHCCCCCEEEEEEECCCC
AISAAPVVVGQTLVVQTRGGGVYGYVPK
CEEECEEEECCEEEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]