Click here to switch to the map view.

The map label for this gene is 17545869

Identifier: 17545869

GI number: 17545869

Start: 1206152

End: 1207216

Strand: Reverse

Name: 17545869

Synonym: RSc1150

Alternate gene names: NA

Gene position: 1207216-1206152 (Counterclockwise)

Preceding gene: 17545870

Following gene: 17545867

Centisome position: 32.48

GC content: 71.36

Gene sequence:

>1065_bases
ATGGCCCGGCCCGGCGCGGCTTTCCGTGCGTGGCGCGGCATCGCCGCCGCGCTGGCCATGCTGGCCGCGACGGCGGCGCC
CGCCGCGCCCAAGGGGCACGCCACAGCAGCGCCCGCCGCGCCAGCCTGCTTCACCTTCGCCGTGGTCGGCAACGTGCCGC
AGCGGCCCGAAGACGTCGCCCCCGCCCGCGCGCTGCTCGACGCCATCGACACCGAGCACCCCGCCTTCGTCGTCCACCTC
GGCAACCTCAAGGGCCGGGACGAATCCTGCACCGACAACCTGCTCGAAGAGCGCCACGACCTGCTCGACAGCACCATCAC
GCCGCTCATCTACATCCCCGGCGACCACGACTGGAGCGATTGCGGGCGCCCCACCGCCGGCCGCTTCGACCCGATCGAGC
GCCTGTTGCGGCTACGCGATCTGTTCTACCCCGACGACAACGCGCTCGGCCAGCGGACCATGACGGTGATGCGCCAGTCC
GACCAGGCCAAGTTCCGCAGCTACCGCGAGAACGCGCGCTGGGAAACCGGCGGCGTCCTGTTCGTCACGCTCAACGTGCC
GGGCGACAACAACAACTACAAGACCGCCGGCGGCCGCAACGGTGAATACGAAGACCGCCTCGAAGCCAACCGCCAGTGGC
TCGCGCGCGCATTCGCCATCGCACGCCAGCGCAAGCTGCCGGGCATGGTGATCATGATGCAGGCCGACCCCCTGTTCGAA
GACGGCTGGGAGCGCCGCCGCGCGCCCAACCTGCTCGACGGCCTGCTGCGCCGCCGCCCGCACGACGGCTATCTCGCGCT
CAAGCGCCAACTGCGCGCCCTCGCCCGCGAGTACGACGGCGCCGTGCTGCTGATCCACGGCGCCAGCCAGAGCTTCCTGC
TCGACCGCCCGCTCAAGGATGAAAGCGGCCGCCCCGATCCGCATGTGATGCGCGCCCGCACGTTCGGCTCGCCGACGCTG
GACCAATGGCTGGAAGTCTCCGTCACGCCGGGCACCGCGCCGCTGTTCCACATCCGCGCCCGCCGCCTGGCCAGCGACAT
CGCGCCATCCACGCCGCAGCAATGA

Upstream 100 bases:

>100_bases
TCGCCGAGGCGCTCGACGGCATCGACCCGGACAGCATGACGCCGCGCGACGCGCTCGACGCGCTGTACCGGCTCAAGGCG
CTGTCGGACGCATCCGCGTG

Downstream 100 bases:

>100_bases
AAACGGGAGCCGAAGCTCCCGTTCCATTGCGTTACCTCTCAGCACACCGATCTGTCAGTGCAGCGTGCGCGGCGGCTCCT
CATCGTCTTCATCGGCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MARPGAAFRAWRGIAAALAMLAATAAPAAPKGHATAAPAAPACFTFAVVGNVPQRPEDVAPARALLDAIDTEHPAFVVHL
GNLKGRDESCTDNLLEERHDLLDSTITPLIYIPGDHDWSDCGRPTAGRFDPIERLLRLRDLFYPDDNALGQRTMTVMRQS
DQAKFRSYRENARWETGGVLFVTLNVPGDNNNYKTAGGRNGEYEDRLEANRQWLARAFAIARQRKLPGMVIMMQADPLFE
DGWERRRAPNLLDGLLRRRPHDGYLALKRQLRALAREYDGAVLLIHGASQSFLLDRPLKDESGRPDPHVMRARTFGSPTL
DQWLEVSVTPGTAPLFHIRARRLASDIAPSTPQQ

Sequences:

>Translated_354_residues
MARPGAAFRAWRGIAAALAMLAATAAPAAPKGHATAAPAAPACFTFAVVGNVPQRPEDVAPARALLDAIDTEHPAFVVHL
GNLKGRDESCTDNLLEERHDLLDSTITPLIYIPGDHDWSDCGRPTAGRFDPIERLLRLRDLFYPDDNALGQRTMTVMRQS
DQAKFRSYRENARWETGGVLFVTLNVPGDNNNYKTAGGRNGEYEDRLEANRQWLARAFAIARQRKLPGMVIMMQADPLFE
DGWERRRAPNLLDGLLRRRPHDGYLALKRQLRALAREYDGAVLLIHGASQSFLLDRPLKDESGRPDPHVMRARTFGSPTL
DQWLEVSVTPGTAPLFHIRARRLASDIAPSTPQQ
>Mature_353_residues
ARPGAAFRAWRGIAAALAMLAATAAPAAPKGHATAAPAAPACFTFAVVGNVPQRPEDVAPARALLDAIDTEHPAFVVHLG
NLKGRDESCTDNLLEERHDLLDSTITPLIYIPGDHDWSDCGRPTAGRFDPIERLLRLRDLFYPDDNALGQRTMTVMRQSD
QAKFRSYRENARWETGGVLFVTLNVPGDNNNYKTAGGRNGEYEDRLEANRQWLARAFAIARQRKLPGMVIMMQADPLFED
GWERRRAPNLLDGLLRRRPHDGYLALKRQLRALAREYDGAVLLIHGASQSFLLDRPLKDESGRPDPHVMRARTFGSPTLD
QWLEVSVTPGTAPLFHIRARRLASDIAPSTPQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39323; Mature: 39192

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPGAAFRAWRGIAAALAMLAATAAPAAPKGHATAAPAAPACFTFAVVGNVPQRPEDVA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH
PARALLDAIDTEHPAFVVHLGNLKGRDESCTDNLLEERHDLLDSTITPLIYIPGDHDWSD
HHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHH
CGRPTAGRFDPIERLLRLRDLFYPDDNALGQRTMTVMRQSDQAKFRSYRENARWETGGVL
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
FVTLNVPGDNNNYKTAGGRNGEYEDRLEANRQWLARAFAIARQRKLPGMVIMMQADPLFE
EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
DGWERRRAPNLLDGLLRRRPHDGYLALKRQLRALAREYDGAVLLIHGASQSFLLDRPLKD
HHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCC
ESGRPDPHVMRARTFGSPTLDQWLEVSVTPGTAPLFHIRARRLASDIAPSTPQQ
CCCCCCCHHEEECCCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ARPGAAFRAWRGIAAALAMLAATAAPAAPKGHATAAPAAPACFTFAVVGNVPQRPEDVA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH
PARALLDAIDTEHPAFVVHLGNLKGRDESCTDNLLEERHDLLDSTITPLIYIPGDHDWSD
HHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHH
CGRPTAGRFDPIERLLRLRDLFYPDDNALGQRTMTVMRQSDQAKFRSYRENARWETGGVL
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
FVTLNVPGDNNNYKTAGGRNGEYEDRLEANRQWLARAFAIARQRKLPGMVIMMQADPLFE
EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
DGWERRRAPNLLDGLLRRRPHDGYLALKRQLRALAREYDGAVLLIHGASQSFLLDRPLKD
HHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCC
ESGRPDPHVMRARTFGSPTLDQWLEVSVTPGTAPLFHIRARRLASDIAPSTPQQ
CCCCCCCHHEEECCCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA