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The map label for this gene is trpH [H]

Identifier: 17545859

GI number: 17545859

Start: 1196595

End: 1197455

Strand: Direct

Name: trpH [H]

Synonym: RSc1140

Alternate gene names: 17545859

Gene position: 1196595-1197455 (Clockwise)

Preceding gene: 17545854

Following gene: 17545860

Centisome position: 32.2

GC content: 72.47

Gene sequence:

>861_bases
ATGCTCAAACGCTCCGCTTCCGCTCCCATCAACGCCGACCTGCACTGCCACTCCACGGTGTCGGACGGCCTGCTCGCACC
CCGTGAAGTCGCCGCCCGCGCCGCCGCCCATGGCGTGACGCTGTGGGCGCTGACCGACCACGACGAGGTCGGCGGCCAGG
CCGCCGCGCGCGAGGCGGCCGAATCGCTCGGCATGGACTACCTGGCGGGCGTGGAAATCTCCGTCACGTGGGCCGGCCGC
ACGCTGCATATCGTCGGCCTCGGCATCGATCCGGACGATGCGGCCCTGGTGCAGGGCCTGGCGCGCACCCGCTCGGGCCG
CTGCGCGCGCGCCGAAGACATGGCCGAGGCCCTGGGCAAGCTGGGCATCCACGGTGCCTACGAGGGCGCGCTGTCATACG
CCGGCAACCCGGACATGATCTCGCGCACGCATTTCGCGCGCTTCCTGGTCGAGCACGGCCATTGCCGCGACATCGCCGAG
GTGTTCGACCGCTACCTGGGCGAGGGCAAGCCCGGCTTCGTGCCGCACCGGTGGTCCCGCCTGGCCGACGCCATCGGCTG
GATCCGGGGCGCCGGCGGCGTCGCGGTGATGGCGCATCCGGGCCGCTACACGCTGACGCTGCTCGAGCACGGTGCGCTGT
TCGACGAGTTCAAGGATCTCGGCGGCGAGGGCGTCGAGGTCGTCACCGGCAGCCACACGCCCGACCAGTACGCCTGCTAT
GCCGATGTGGCGCGCCGCTACGGCCTGCTGGCCTCGCGCGGATCGGACTTCCACGGCCCCGGCGAGGGCCGGGTCGAGCT
GGGCGAGCTGCCGCCGCTGCCGGACAACCTGACGCCGGTGTGGAGCCGGTGGCTGTCCTGA

Upstream 100 bases:

>100_bases
GCCGCCAACGCCAGCGTGGCCAGTCGGGTCTTCCCGCGGGCATCGGCGGTGCGCGAACGGCAGTTACCCCGCGGCCGCGT
CGCGGCAGTAAAATGGCGGA

Downstream 100 bases:

>100_bases
GCCCGCAGCCCGCCGGCCGCGCATGTCCCAGTTCTTCCAGATCCATCCGACCACGCCGCAGGGGCGGCTGATCCGCCAGG
CGGTGGAAATCATCCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MLKRSASAPINADLHCHSTVSDGLLAPREVAARAAAHGVTLWALTDHDEVGGQAAAREAAESLGMDYLAGVEISVTWAGR
TLHIVGLGIDPDDAALVQGLARTRSGRCARAEDMAEALGKLGIHGAYEGALSYAGNPDMISRTHFARFLVEHGHCRDIAE
VFDRYLGEGKPGFVPHRWSRLADAIGWIRGAGGVAVMAHPGRYTLTLLEHGALFDEFKDLGGEGVEVVTGSHTPDQYACY
ADVARRYGLLASRGSDFHGPGEGRVELGELPPLPDNLTPVWSRWLS

Sequences:

>Translated_286_residues
MLKRSASAPINADLHCHSTVSDGLLAPREVAARAAAHGVTLWALTDHDEVGGQAAAREAAESLGMDYLAGVEISVTWAGR
TLHIVGLGIDPDDAALVQGLARTRSGRCARAEDMAEALGKLGIHGAYEGALSYAGNPDMISRTHFARFLVEHGHCRDIAE
VFDRYLGEGKPGFVPHRWSRLADAIGWIRGAGGVAVMAHPGRYTLTLLEHGALFDEFKDLGGEGVEVVTGSHTPDQYACY
ADVARRYGLLASRGSDFHGPGEGRVELGELPPLPDNLTPVWSRWLS
>Mature_286_residues
MLKRSASAPINADLHCHSTVSDGLLAPREVAARAAAHGVTLWALTDHDEVGGQAAAREAAESLGMDYLAGVEISVTWAGR
TLHIVGLGIDPDDAALVQGLARTRSGRCARAEDMAEALGKLGIHGAYEGALSYAGNPDMISRTHFARFLVEHGHCRDIAE
VFDRYLGEGKPGFVPHRWSRLADAIGWIRGAGGVAVMAHPGRYTLTLLEHGALFDEFKDLGGEGVEVVTGSHTPDQYACY
ADVARRYGLLASRGSDFHGPGEGRVELGELPPLPDNLTPVWSRWLS

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=274, Percent_Identity=41.2408759124088, Blast_Score=187, Evalue=5e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 30551; Mature: 30551

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRSASAPINADLHCHSTVSDGLLAPREVAARAAAHGVTLWALTDHDEVGGQAAAREAA
CCCCCCCCCCCCCEEECCCHHCCCCCHHHHHHHHHHCCEEEEEECCCHHHCCHHHHHHHH
ESLGMDYLAGVEISVTWAGRTLHIVGLGIDPDDAALVQGLARTRSGRCARAEDMAEALGK
HHCCCHHHCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LGIHGAYEGALSYAGNPDMISRTHFARFLVEHGHCRDIAEVFDRYLGEGKPGFVPHRWSR
HCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
LADAIGWIRGAGGVAVMAHPGRYTLTLLEHGALFDEFKDLGGEGVEVVTGSHTPDQYACY
HHHHHHHHHCCCCEEEEECCCCEEEEEEHHCCHHHHHHHCCCCCEEEEECCCCCCHHHHH
ADVARRYGLLASRGSDFHGPGEGRVELGELPPLPDNLTPVWSRWLS
HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MLKRSASAPINADLHCHSTVSDGLLAPREVAARAAAHGVTLWALTDHDEVGGQAAAREAA
CCCCCCCCCCCCCEEECCCHHCCCCCHHHHHHHHHHCCEEEEEECCCHHHCCHHHHHHHH
ESLGMDYLAGVEISVTWAGRTLHIVGLGIDPDDAALVQGLARTRSGRCARAEDMAEALGK
HHCCCHHHCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LGIHGAYEGALSYAGNPDMISRTHFARFLVEHGHCRDIAEVFDRYLGEGKPGFVPHRWSR
HCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
LADAIGWIRGAGGVAVMAHPGRYTLTLLEHGALFDEFKDLGGEGVEVVTGSHTPDQYACY
HHHHHHHHHCCCCEEEEECCCCEEEEEEHHCCHHHHHHHCCCCCEEEEECCCCCCHHHHH
ADVARRYGLLASRGSDFHGPGEGRVELGELPPLPDNLTPVWSRWLS
HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]