Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is 17545853

Identifier: 17545853

GI number: 17545853

Start: 1191477

End: 1192283

Strand: Direct

Name: 17545853

Synonym: RSc1134

Alternate gene names: NA

Gene position: 1191477-1192283 (Clockwise)

Preceding gene: 17545849

Following gene: 17545854

Centisome position: 32.06

GC content: 72.99

Gene sequence:

>807_bases
ATGTCACTGCGCCACGAGGCGCTGGCCGCCCTGTGCCTGACCGATCCCGCCGACAAGGCCGACGCCACGCTGCGCCTGGG
CGAGCGTGCCCGGACGGCGGACGATTCCGCGTGGCTTGCCGACGCGCCGATCGTTGCGCCGGCCGCCGGCATCCCGGGTC
GCCCGGCGGCGCCGGTGCTGGTGCCGCCCAGCGAGGTGCCGCGTCGCCGCGCGATCGATACGCCGCACGGGCGGGCCGTG
CTGCTGCATGCGCTGGCGCACATCGAGTTCAACGCCATCAACCTTGCGCTCGACGCCGTGTGGCGCTTTGCCGGCATGCC
GGTCGCGTTCTATCGGGATTGGATGCGCGTGGCGGCGGAGGAGGCGACGCACTTTTCGCTGCTGTCGGCCCATCTGGCCA
CGCTCGATTGCCGCTATGGCGATCATCCTGCCCACGACGGTCTGTGGCAGATGACCGAGAAGACCGCCGCCGACCCGCTC
GCCCGCATGGCGCTGGTGCCGCGCACGCTGGAGGCCCGCGGGCTGGACGCCTCGCCGCCGATCCGCGCGAAGCTGGCCGC
CGCCGGCGACATGGCCGCTGCCGGCATCCTCGACATCATCCTGCGCGACGAAATCGGCCACGTGGCGGTGGGCAACCGCT
GGTACCGCTGGTTGTGCGGGCGCGCCGGACTGGACCCGCTGCCGACCTATCGCCGGCTCGCCGAGCAGTACGGCGCCCCG
CGCCTGCGCGGCCCGTTCAACCTCGATGCCCGCCGCCAGGCCGGCTTCGACGACGACGAGATCGCCGCGCTCGAGGCCAG
CTTCTAA

Upstream 100 bases:

>100_bases
GCGCGCCTTCAAGCGCGGCCGGGCGGCCGGCTCGACACGTCGAATTAAAATGCCGGAAAGCCCGGATTGTACGCCCATGA
CCTCATTCCAGCCGCCTGCC

Downstream 100 bases:

>100_bases
GCCGCGCGCGCCGGGCGGGGCACCGGTATAATCGCCAGAAAAACGAACGACCGTTCGATTCCTTCCCGGCGAGGCAACCA
TGGACTCCACCACCCCCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSLRHEALAALCLTDPADKADATLRLGERARTADDSAWLADAPIVAPAAGIPGRPAAPVLVPPSEVPRRRAIDTPHGRAV
LLHALAHIEFNAINLALDAVWRFAGMPVAFYRDWMRVAAEEATHFSLLSAHLATLDCRYGDHPAHDGLWQMTEKTAADPL
ARMALVPRTLEARGLDASPPIRAKLAAAGDMAAAGILDIILRDEIGHVAVGNRWYRWLCGRAGLDPLPTYRRLAEQYGAP
RLRGPFNLDARRQAGFDDDEIAALEASF

Sequences:

>Translated_268_residues
MSLRHEALAALCLTDPADKADATLRLGERARTADDSAWLADAPIVAPAAGIPGRPAAPVLVPPSEVPRRRAIDTPHGRAV
LLHALAHIEFNAINLALDAVWRFAGMPVAFYRDWMRVAAEEATHFSLLSAHLATLDCRYGDHPAHDGLWQMTEKTAADPL
ARMALVPRTLEARGLDASPPIRAKLAAAGDMAAAGILDIILRDEIGHVAVGNRWYRWLCGRAGLDPLPTYRRLAEQYGAP
RLRGPFNLDARRQAGFDDDEIAALEASF
>Mature_267_residues
SLRHEALAALCLTDPADKADATLRLGERARTADDSAWLADAPIVAPAAGIPGRPAAPVLVPPSEVPRRRAIDTPHGRAVL
LHALAHIEFNAINLALDAVWRFAGMPVAFYRDWMRVAAEEATHFSLLSAHLATLDCRYGDHPAHDGLWQMTEKTAADPLA
RMALVPRTLEARGLDASPPIRAKLAAAGDMAAAGILDIILRDEIGHVAVGNRWYRWLCGRAGLDPLPTYRRLAEQYGAPR
LRGPFNLDARRQAGFDDDEIAALEASF

Specific function: Unknown

COG id: COG2833

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007402
- InterPro:   IPR009078
- InterPro:   IPR011197 [H]

Pfam domain/function: PF04305 DUF455 [H]

EC number: NA

Molecular weight: Translated: 29093; Mature: 28961

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRHEALAALCLTDPADKADATLRLGERARTADDSAWLADAPIVAPAAGIPGRPAAPVL
CCCHHHHHHHHHHCCCCCCCCHHHHHCCHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEE
VPPSEVPRRRAIDTPHGRAVLLHALAHIEFNAINLALDAVWRFAGMPVAFYRDWMRVAAE
ECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EATHFSLLSAHLATLDCRYGDHPAHDGLWQMTEKTAADPLARMALVPRTLEARGLDASPP
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
IRAKLAAAGDMAAAGILDIILRDEIGHVAVGNRWYRWLCGRAGLDPLPTYRRLAEQYGAP
HHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHCCC
RLRGPFNLDARRQAGFDDDEIAALEASF
CCCCCCCCCCHHHCCCCCCCEEEEECCC
>Mature Secondary Structure 
SLRHEALAALCLTDPADKADATLRLGERARTADDSAWLADAPIVAPAAGIPGRPAAPVL
CCHHHHHHHHHHCCCCCCCCHHHHHCCHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEE
VPPSEVPRRRAIDTPHGRAVLLHALAHIEFNAINLALDAVWRFAGMPVAFYRDWMRVAAE
ECCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EATHFSLLSAHLATLDCRYGDHPAHDGLWQMTEKTAADPLARMALVPRTLEARGLDASPP
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
IRAKLAAAGDMAAAGILDIILRDEIGHVAVGNRWYRWLCGRAGLDPLPTYRRLAEQYGAP
HHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHCCC
RLRGPFNLDARRQAGFDDDEIAALEASF
CCCCCCCCCCHHHCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]