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The map label for this gene is nagAa [H]

Identifier: 17545810

GI number: 17545810

Start: 1148186

End: 1149172

Strand: Reverse

Name: nagAa [H]

Synonym: RSc1091

Alternate gene names: 17545810

Gene position: 1149172-1148186 (Counterclockwise)

Preceding gene: 17545812

Following gene: 17545809

Centisome position: 30.92

GC content: 69.81

Gene sequence:

>987_bases
ATGGACGTCACCCTCACCCCGCTGCAGCGCGTCGTCAGCGCGCGCGCCGGCGATAACCTGCTCGAAGTGCTGCGCGCGCA
TCAGGTTCCCATCTCGTACAGCTGCCTGTCGGGACGCTGCGGAACGTGCCGCTGCCGCGTGCTCTCGGGCAACGTCGTCG
CCACCGGCGGCACCGAGATCAACGCGCCCTCCGCGCCGGGCCAGACCGTGCTGGCCTGCCAGACGACGCTGGTCGAAGAC
TGCGCGATCGAACTGCCCGAGGTGGACGAGATCGTCGTGCACCCGGCCAGGATCATCAAATCGAAGGTCGTCGCGATCGA
GGACATGACGCACGACATCAAGCGGATCCGCCTGGAGCTGGCCAAGCCGCTCGCGTTCTCGCCGGGCCAGTACGCGACCC
TGCAGTTCACGCCGCGGCATGTGCGGCCCTACTCCATGGCGTTCGCCGATGCGGGACAGGCGCTGGAGTTCCATGTGCGG
CTGGTGCCGGGCGGACGCGTGACCTCCTACGTGGCGGCCGAACTCAAGGTCGGGGACGACGTGCGCGTCAGCGGCCCGCT
GGGCACGGCCTACCTGCGCCGTAAAAACACCGATCCGGTCATCTGCGTGGCCGGCGGCACGGGGCTTGCGCCCATCCTCT
CCATCCTGCGGGGCATGGCCGAGGCCGGCATGGCCAATCCGGTCCACGTCTACTTCGGCGTGCGCTCGCCGGCCGATGTG
TACGGAACGCACTGGCTGGACGCCCTGCGCGAACGCCTGCCGAACTTGCACACGCATGTCGTCGTCGCCACCTCCAGCGC
GGATGCGCGCTACCGCTCGGGCGTCGTCACCGACGCCGTCGCGAGCGACTGGGGCGACCTGCGGGGATGGCGCGCCTACC
TGGCCGGGGCACCGGTCATGGTGGATGCGGCCAGCCTGTTGCTACGCCAGCGCGGCGTGCCGGCCGAACACGTCTACGCC
GATGCGTTCTACGCGGTGGGCGTCTGA

Upstream 100 bases:

>100_bases
CGAGTGATATGACACATCAGGTTGCTTCTATTTATGGATGGCGTCAAGCGCGTCATGATGCGTCCACACCTACAGACAGA
CCAGCCCGGAGACACTGGCC

Downstream 100 bases:

>100_bases
GCCTCCCCCCACCGGCCTCCACAAAAACACAGGAGACAAAGCATGAAGGAATCCCCGCTCAGCTTCTCGAAGCCGCTGTG
GAAGGACAGCGGATCGAGCC

Product: ferredoxin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MDVTLTPLQRVVSARAGDNLLEVLRAHQVPISYSCLSGRCGTCRCRVLSGNVVATGGTEINAPSAPGQTVLACQTTLVED
CAIELPEVDEIVVHPARIIKSKVVAIEDMTHDIKRIRLELAKPLAFSPGQYATLQFTPRHVRPYSMAFADAGQALEFHVR
LVPGGRVTSYVAAELKVGDDVRVSGPLGTAYLRRKNTDPVICVAGGTGLAPILSILRGMAEAGMANPVHVYFGVRSPADV
YGTHWLDALRERLPNLHTHVVVATSSADARYRSGVVTDAVASDWGDLRGWRAYLAGAPVMVDAASLLLRQRGVPAEHVYA
DAFYAVGV

Sequences:

>Translated_328_residues
MDVTLTPLQRVVSARAGDNLLEVLRAHQVPISYSCLSGRCGTCRCRVLSGNVVATGGTEINAPSAPGQTVLACQTTLVED
CAIELPEVDEIVVHPARIIKSKVVAIEDMTHDIKRIRLELAKPLAFSPGQYATLQFTPRHVRPYSMAFADAGQALEFHVR
LVPGGRVTSYVAAELKVGDDVRVSGPLGTAYLRRKNTDPVICVAGGTGLAPILSILRGMAEAGMANPVHVYFGVRSPADV
YGTHWLDALRERLPNLHTHVVVATSSADARYRSGVVTDAVASDWGDLRGWRAYLAGAPVMVDAASLLLRQRGVPAEHVYA
DAFYAVGV
>Mature_328_residues
MDVTLTPLQRVVSARAGDNLLEVLRAHQVPISYSCLSGRCGTCRCRVLSGNVVATGGTEINAPSAPGQTVLACQTTLVED
CAIELPEVDEIVVHPARIIKSKVVAIEDMTHDIKRIRLELAKPLAFSPGQYATLQFTPRHVRPYSMAFADAGQALEFHVR
LVPGGRVTSYVAAELKVGDDVRVSGPLGTAYLRRKNTDPVICVAGGTGLAPILSILRGMAEAGMANPVHVYFGVRSPADV
YGTHWLDALRERLPNLHTHVVVATSSADARYRSGVVTDAVASDWGDLRGWRAYLAGAPVMVDAASLLLRQRGVPAEHVYA
DAFYAVGV

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. Transfers electrons from ferredoxin (ndoA) to NADH [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI2367314, Length=227, Percent_Identity=29.5154185022026, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 35144; Mature: 35144

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVTLTPLQRVVSARAGDNLLEVLRAHQVPISYSCLSGRCGTCRCRVLSGNVVATGGTEI
CCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHCCCCCCEEEEEEECCEEEECCCCC
NAPSAPGQTVLACQTTLVEDCAIELPEVDEIVVHPARIIKSKVVAIEDMTHDIKRIRLEL
CCCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AKPLAFSPGQYATLQFTPRHVRPYSMAFADAGQALEFHVRLVPGGRVTSYVAAELKVGDD
HCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCEEEEEEEEECCCCCHHEEEEEEECCCC
VRVSGPLGTAYLRRKNTDPVICVAGGTGLAPILSILRGMAEAGMANPVHVYFGVRSPADV
EEECCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHH
YGTHWLDALRERLPNLHTHVVVATSSADARYRSGVVTDAVASDWGDLRGWRAYLAGAPVM
HHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCCHHHHHHHCHHHHHHHHHHHCCCCHH
VDAASLLLRQRGVPAEHVYADAFYAVGV
HHHHHHHHHHCCCCHHHHHHHHEEEECC
>Mature Secondary Structure
MDVTLTPLQRVVSARAGDNLLEVLRAHQVPISYSCLSGRCGTCRCRVLSGNVVATGGTEI
CCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHCCCCCCEEEEEEECCEEEECCCCC
NAPSAPGQTVLACQTTLVEDCAIELPEVDEIVVHPARIIKSKVVAIEDMTHDIKRIRLEL
CCCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AKPLAFSPGQYATLQFTPRHVRPYSMAFADAGQALEFHVRLVPGGRVTSYVAAELKVGDD
HCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCEEEEEEEEECCCCCHHEEEEEEECCCC
VRVSGPLGTAYLRRKNTDPVICVAGGTGLAPILSILRGMAEAGMANPVHVYFGVRSPADV
EEECCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHH
YGTHWLDALRERLPNLHTHVVVATSSADARYRSGVVTDAVASDWGDLRGWRAYLAGAPVM
HHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHCCCHHHHHHHCHHHHHHHHHHHCCCCHH
VDAASLLLRQRGVPAEHVYADAFYAVGV
HHHHHHHHHHCCCCHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8486285; 8787402; 2294092 [H]