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The map label for this gene is 17545701

Identifier: 17545701

GI number: 17545701

Start: 1033341

End: 1034630

Strand: Reverse

Name: 17545701

Synonym: RSc0982

Alternate gene names: NA

Gene position: 1034630-1033341 (Counterclockwise)

Preceding gene: 17545702

Following gene: 17545700

Centisome position: 27.84

GC content: 72.09

Gene sequence:

>1290_bases
ATGCCATTCCCATTCCATCGCACCTCTCCCAGCCTCGCAGCCTTTCTGTGGGGCGCACTTTACCTGCTGGCCGCCGTCGT
ATCGCACCGGCTCAACGGGCCGATCGACATGACCGGCTACATCTGGCTGTCGGCGGGCATCACCATGGCGGCATTCATGC
TGCGGCCCTACCGCGAGTGGCCCGGGCTCGGCGCGGCGTTCACCGTCGGACAGCTGGTGCTGTGCGCCTTCGAGAAAGGC
AACCCGGCGCATGCCCTGCTGTTCGTGCTGGACGAGGCCGGCAGCGCCGCGCTGGCGGTGGCGCTGGTCCGGCTGACGCG
GGTGCCGCTGGACGGGCTCGACTTCGTGCGGGCGATGCTGGCGGCCGGCACGCTCAGCGCGCTGCTGGGCGCGCTGCCCG
GCGCGGCATGGTTCGCCTGGTCGCAAGACGCGCCGTTCGGGCAGGTGCTGCGCATCTGGGCGGCGTCGGACTTCCTGGGC
GTGCTGATCGTCACGCCAGTGCTGGCCACCTGGTCGCGCTTCCGCGCCCTCCGCTCGGGCGGACCGGACCGCACCGAAAC
CCTGCTGGGCCTGGCGGCAAGCGTTGCGCTGGTGGTCTCGGCCCACCTGATCTTCGACGGCAACAGCACGGCCCGGTTCG
GCACCGGCATCGGTTTCGCGCTGACCTACGTGCCGCTGTTCTTCGCCGTCGTGGTGGCGCTGCTGTGGGGCGGGCGCGGC
GGCTCGGCGGCGGTGCTGGTGCTGGCGCTGACGGTGCTGATCGAGACCGCCGAGGGCGACGGGCCATTCGCCGTGCTCGA
CCGCCACCATGGCCAGTCATTGCTGGAAGCCCAGCTGTATCTGGGGATCACCGCCCTGCTGGTGCTGCTGGTCAGCGCGC
TGAAGACCACGCGCGAACAACTGCACGCACAGGGCGCGCGATGGCAGGGCCGCGTGGAGCTGGCGCTGACCGCCGCGGGC
CAGCTGGTCTACACCGTCGACCCGGCCCGCGGCCGCGTCGACTGGGGCGGCGATGTGGAACTGCGCTTCGGCCATGACGC
GGCCACCATGGCCTCGGTCGCCACCGTGCTGCAGCTGGTGCACCCGGACGACCGCGAAACCCTGCGCGCGCGCTGGCTCG
GCGCCGCGCCCGCCGACGTCGATGCCACCCCCGCGCGGCGGCAGACGCTGCAGATCACCGCGCGCGACGGCACCCTGCAC
ACCGTGATCGACTCCGGCGCCACGCTCGCCGACACCGCCGGCAACCCCGTGCTGGTCACCGGCACCTGGTCGATCGAAAC
GGCGCGCTGA

Upstream 100 bases:

>100_bases
GCGCCGGGCAGGTGCCGCCGCATCAGCCGGGTGCGGTAGCATCCCGCGCACGGCGCCCCGACATGCGGCGCGCTTGCCTG
TTTCCATCGAGGGAACCCGG

Downstream 100 bases:

>100_bases
GCCCGCCGCGCCGTAGCGGCCCCGAGCCCCGAGTGCCGCCGCCCGACCGGATGCCGCGCTTCAGGTACGCCCCCCGGCCG
AAGCTGTCGCGCAGCCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Sensor Protein; PAS Fold Family Protein; PAS/PAC Sensor Protein

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MPFPFHRTSPSLAAFLWGALYLLAAVVSHRLNGPIDMTGYIWLSAGITMAAFMLRPYREWPGLGAAFTVGQLVLCAFEKG
NPAHALLFVLDEAGSAALAVALVRLTRVPLDGLDFVRAMLAAGTLSALLGALPGAAWFAWSQDAPFGQVLRIWAASDFLG
VLIVTPVLATWSRFRALRSGGPDRTETLLGLAASVALVVSAHLIFDGNSTARFGTGIGFALTYVPLFFAVVVALLWGGRG
GSAAVLVLALTVLIETAEGDGPFAVLDRHHGQSLLEAQLYLGITALLVLLVSALKTTREQLHAQGARWQGRVELALTAAG
QLVYTVDPARGRVDWGGDVELRFGHDAATMASVATVLQLVHPDDRETLRARWLGAAPADVDATPARRQTLQITARDGTLH
TVIDSGATLADTAGNPVLVTGTWSIETAR

Sequences:

>Translated_429_residues
MPFPFHRTSPSLAAFLWGALYLLAAVVSHRLNGPIDMTGYIWLSAGITMAAFMLRPYREWPGLGAAFTVGQLVLCAFEKG
NPAHALLFVLDEAGSAALAVALVRLTRVPLDGLDFVRAMLAAGTLSALLGALPGAAWFAWSQDAPFGQVLRIWAASDFLG
VLIVTPVLATWSRFRALRSGGPDRTETLLGLAASVALVVSAHLIFDGNSTARFGTGIGFALTYVPLFFAVVVALLWGGRG
GSAAVLVLALTVLIETAEGDGPFAVLDRHHGQSLLEAQLYLGITALLVLLVSALKTTREQLHAQGARWQGRVELALTAAG
QLVYTVDPARGRVDWGGDVELRFGHDAATMASVATVLQLVHPDDRETLRARWLGAAPADVDATPARRQTLQITARDGTLH
TVIDSGATLADTAGNPVLVTGTWSIETAR
>Mature_428_residues
PFPFHRTSPSLAAFLWGALYLLAAVVSHRLNGPIDMTGYIWLSAGITMAAFMLRPYREWPGLGAAFTVGQLVLCAFEKGN
PAHALLFVLDEAGSAALAVALVRLTRVPLDGLDFVRAMLAAGTLSALLGALPGAAWFAWSQDAPFGQVLRIWAASDFLGV
LIVTPVLATWSRFRALRSGGPDRTETLLGLAASVALVVSAHLIFDGNSTARFGTGIGFALTYVPLFFAVVVALLWGGRGG
SAAVLVLALTVLIETAEGDGPFAVLDRHHGQSLLEAQLYLGITALLVLLVSALKTTREQLHAQGARWQGRVELALTAAGQ
LVYTVDPARGRVDWGGDVELRFGHDAATMASVATVLQLVHPDDRETLRARWLGAAPADVDATPARRQTLQITARDGTLHT
VIDSGATLADTAGNPVLVTGTWSIETAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45426; Mature: 45295

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFPFHRTSPSLAAFLWGALYLLAAVVSHRLNGPIDMTGYIWLSAGITMAAFMLRPYREW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHC
PGLGAAFTVGQLVLCAFEKGNPAHALLFVLDEAGSAALAVALVRLTRVPLDGLDFVRAML
CCCCHHHHHHHHHEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHH
AAGTLSALLGALPGAAWFAWSQDAPFGQVLRIWAASDFLGVLIVTPVLATWSRFRALRSG
HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPDRTETLLGLAASVALVVSAHLIFDGNSTARFGTGIGFALTYVPLFFAVVVALLWGGRG
CCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
GSAAVLVLALTVLIETAEGDGPFAVLDRHHGQSLLEAQLYLGITALLVLLVSALKTTREQ
CHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHAQGARWQGRVELALTAAGQLVYTVDPARGRVDWGGDVELRFGHDAATMASVATVLQLV
HHHCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
HPDDRETLRARWLGAAPADVDATPARRQTLQITARDGTLHTVIDSGATLADTAGNPVLVT
CCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCEEECCCCCCEEEE
GTWSIETAR
EEEEEECCC
>Mature Secondary Structure 
PFPFHRTSPSLAAFLWGALYLLAAVVSHRLNGPIDMTGYIWLSAGITMAAFMLRPYREW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHC
PGLGAAFTVGQLVLCAFEKGNPAHALLFVLDEAGSAALAVALVRLTRVPLDGLDFVRAML
CCCCHHHHHHHHHEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHH
AAGTLSALLGALPGAAWFAWSQDAPFGQVLRIWAASDFLGVLIVTPVLATWSRFRALRSG
HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPDRTETLLGLAASVALVVSAHLIFDGNSTARFGTGIGFALTYVPLFFAVVVALLWGGRG
CCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
GSAAVLVLALTVLIETAEGDGPFAVLDRHHGQSLLEAQLYLGITALLVLLVSALKTTREQ
CHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHAQGARWQGRVELALTAAGQLVYTVDPARGRVDWGGDVELRFGHDAATMASVATVLQLV
HHHCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
HPDDRETLRARWLGAAPADVDATPARRQTLQITARDGTLHTVIDSGATLADTAGNPVLVT
CCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCEEECCCCCCEEEE
GTWSIETAR
EEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA