| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is lldP [H]
Identifier: 17545700
GI number: 17545700
Start: 1031326
End: 1033014
Strand: Reverse
Name: lldP [H]
Synonym: RSc0981
Alternate gene names: 17545700
Gene position: 1033014-1031326 (Counterclockwise)
Preceding gene: 17545701
Following gene: 17545693
Centisome position: 27.8
GC content: 67.38
Gene sequence:
>1689_bases ATGTGGAATCAAGTCTATGACCCGCTCGGCAACGCCGTATGGTCGACCGTCGCGGCCGGCTTGCCGGTGGCGGTACTGCT CTGTTCGCTCGCCTTCTTCCACATGCAGGCGCACCTGGCCGCGGGGCTGGCGCTGCTGGTGGGCGTGGGCATCGCCGCGT TCGTGTTCGGCATGCCGGCGGCGATGGCGGGCAAGGCGGCCGGGCTGGGCATCGTGTCCGGCCTGTTCCCGATCGGCTGG ATCGTCCTCAACATCATCTTCCTGCACCGGCTCACCACCCTGAACGGCTCGTTCAAGGTGCTGCAGGGTTCGATCTCGGG CATCACCGAAGACCGGCGCCTGCAGCTGCTGCTGGTGGCGTTCAGCTTCGGCGCGTTCTTCGAGGGCGCGGCGGGCTTCG GCACGCCGGTGGCCGTGACGGGCGCGATCCTGATCGGGCTGGGCTTCTCGCCGCTGGCGGCCTCGGGGCTGGCACTGATC GCCAACACCGCGCCGGTCGCCTACGGCGCCCTGGGCGCGCCCATCATCGGACTGGCCGCGGTGACGGGGCTCGACCTGAA GGACCTCTCCGCCATGATCGGCCGCCAGTTGCCGTTCTTCTCGGTGCTGGTGCCGTTCTGGCTGATCTGGGCGTTCGCGG GGTTGCGCGGCATGCTGCAGATCTGGCCGGCGATCCTGGTGGCGGGCGTGACCTTCGCCGTTCCGCAGTTCCTGGTGTCG AACTTCCACGGCCCGTGGCTGGTGGACGTGATTGCCGCGCTGGTCTCGATGGGCTCGCTCACGCTGTTCCTGAAAGTGTG GAAACCCAAATCCATCTGGACCTCCACCGCCCTGCGCAACCACCCCGACACGTCCAAGGTCGATCCCGAAGCCGCCGCCG AGGCACGTGCCGCCACCACCGCCGCCGCCGATGCGAAGATCAGCCGCGTGCAGGCCTGGCTGCCGTGGGTGATCCTGACC GTGTTCGTCTTCATCTGGGGCGTACCGCAGTTCAAGGCCTTCGTTGACGGCCTGTGGCAGTTCAAGCTGCCCATCCCCGG CCTCGACAAGATGGTGCTCAAGGGCCCGCCGGTCGTGCCCAAGGTCACGGCCGAAGCCGCGGTGTTCACCTTCAACGTGC TGTCGATGGCGGGCACCGGCATCCTGGCATCGGCCGTCGTCGGGGGCCTGCTGATGGGCTATTCGGTGCCGCGCATGGTC AAGGAGTACTGGAACACCATCAAGCTGACGCGCTATTCGCTGCTGACCATCTGCGCGATGTTCGGCATCGGCTACCTGAC CCGCTACTCGGGCCTGGACGCGACGCTGGGCCTGGCGTTCGCCCACACCGGCGTGCTGTACCCGCTGTTCGGCACCATGC TGGGCTGGCTGGGCGTGGCGCTCACCGGTTCGGACACCGCATCGAACGTGCTGTTCGGCGGCCTGCAGAAGACCACCTCC GAGCAGCTCGGCCTGTCGCCGATCCTGATGTCGGCCGCCAACAGCTCGGGCGGGGTGATGGGCAAGATGATCGACGCGCA GTCCATCGTGGTGGCCTCCACCGCCACCAAGTGGTACGGCCATGAGGGCGACATCCTGCGCTATGTGTTCTTCCACTCGA TCGCGCTGGCCTTCCTGGTGGGCCTGCTGATCACGCTGCAGGCCTACGTGGAACCGTTCACGCGGATGGTGGTGCCGATG GCGCACTAG
Upstream 100 bases:
>100_bases CTACAATCCGCGCTTGTCCGCTGTGCGGGCAGCAAAAGAAACGACGTTTGGCCGTACCTGCTCCACCCCTCGCCAAAACG CTCTACAGGAGGAGACCAAG
Downstream 100 bases:
>100_bases CCCGGCCGCCCGCGCCGCAACGAAAAAGCCGCTCATCGAGCGGCTTTTTTTCATGGCGAGGCCTCCGAGATCGTCCGGCG GCGCCCTACGCCCAGCCGAG
Product: L-lactate permease transmembrane protein
Products: lactate [Cytoplasm]; Proton [Cytoplasm]; glycolate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MWNQVYDPLGNAVWSTVAAGLPVAVLLCSLAFFHMQAHLAAGLALLVGVGIAAFVFGMPAAMAGKAAGLGIVSGLFPIGW IVLNIIFLHRLTTLNGSFKVLQGSISGITEDRRLQLLLVAFSFGAFFEGAAGFGTPVAVTGAILIGLGFSPLAASGLALI ANTAPVAYGALGAPIIGLAAVTGLDLKDLSAMIGRQLPFFSVLVPFWLIWAFAGLRGMLQIWPAILVAGVTFAVPQFLVS NFHGPWLVDVIAALVSMGSLTLFLKVWKPKSIWTSTALRNHPDTSKVDPEAAAEARAATTAAADAKISRVQAWLPWVILT VFVFIWGVPQFKAFVDGLWQFKLPIPGLDKMVLKGPPVVPKVTAEAAVFTFNVLSMAGTGILASAVVGGLLMGYSVPRMV KEYWNTIKLTRYSLLTICAMFGIGYLTRYSGLDATLGLAFAHTGVLYPLFGTMLGWLGVALTGSDTASNVLFGGLQKTTS EQLGLSPILMSAANSSGGVMGKMIDAQSIVVASTATKWYGHEGDILRYVFFHSIALAFLVGLLITLQAYVEPFTRMVVPM AH
Sequences:
>Translated_562_residues MWNQVYDPLGNAVWSTVAAGLPVAVLLCSLAFFHMQAHLAAGLALLVGVGIAAFVFGMPAAMAGKAAGLGIVSGLFPIGW IVLNIIFLHRLTTLNGSFKVLQGSISGITEDRRLQLLLVAFSFGAFFEGAAGFGTPVAVTGAILIGLGFSPLAASGLALI ANTAPVAYGALGAPIIGLAAVTGLDLKDLSAMIGRQLPFFSVLVPFWLIWAFAGLRGMLQIWPAILVAGVTFAVPQFLVS NFHGPWLVDVIAALVSMGSLTLFLKVWKPKSIWTSTALRNHPDTSKVDPEAAAEARAATTAAADAKISRVQAWLPWVILT VFVFIWGVPQFKAFVDGLWQFKLPIPGLDKMVLKGPPVVPKVTAEAAVFTFNVLSMAGTGILASAVVGGLLMGYSVPRMV KEYWNTIKLTRYSLLTICAMFGIGYLTRYSGLDATLGLAFAHTGVLYPLFGTMLGWLGVALTGSDTASNVLFGGLQKTTS EQLGLSPILMSAANSSGGVMGKMIDAQSIVVASTATKWYGHEGDILRYVFFHSIALAFLVGLLITLQAYVEPFTRMVVPM AH >Mature_562_residues MWNQVYDPLGNAVWSTVAAGLPVAVLLCSLAFFHMQAHLAAGLALLVGVGIAAFVFGMPAAMAGKAAGLGIVSGLFPIGW IVLNIIFLHRLTTLNGSFKVLQGSISGITEDRRLQLLLVAFSFGAFFEGAAGFGTPVAVTGAILIGLGFSPLAASGLALI ANTAPVAYGALGAPIIGLAAVTGLDLKDLSAMIGRQLPFFSVLVPFWLIWAFAGLRGMLQIWPAILVAGVTFAVPQFLVS NFHGPWLVDVIAALVSMGSLTLFLKVWKPKSIWTSTALRNHPDTSKVDPEAAAEARAATTAAADAKISRVQAWLPWVILT VFVFIWGVPQFKAFVDGLWQFKLPIPGLDKMVLKGPPVVPKVTAEAAVFTFNVLSMAGTGILASAVVGGLLMGYSVPRMV KEYWNTIKLTRYSLLTICAMFGIGYLTRYSGLDATLGLAFAHTGVLYPLFGTMLGWLGVALTGSDTASNVLFGGLQKTTS EQLGLSPILMSAANSSGGVMGKMIDAQSIVVASTATKWYGHEGDILRYVFFHSIALAFLVGLLITLQAYVEPFTRMVVPM AH
Specific function: Transports glycolate across the membrane. Can also transport L-lactate and D-lactate. Seems to be driven by a proton motive force [H]
COG id: COG1620
COG function: function code C; L-lactate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lactate permease family [H]
Homologues:
Organism=Escherichia coli, GI1789347, Length=562, Percent_Identity=45.5516014234875, Blast_Score=451, Evalue=1e-128, Organism=Escherichia coli, GI1790031, Length=555, Percent_Identity=42.5225225225225, Blast_Score=410, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003804 [H]
Pfam domain/function: PF02652 Lactate_perm [H]
EC number: NA
Molecular weight: Translated: 59397; Mature: 59397
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNQVYDPLGNAVWSTVAAGLPVAVLLCSLAFFHMQAHLAAGLALLVGVGIAAFVFGMPA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AMAGKAAGLGIVSGLFPIGWIVLNIIFLHRLTTLNGSFKVLQGSISGITEDRRLQLLLVA HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECHHCCCCCCHHHHHHHHH FSFGAFFEGAAGFGTPVAVTGAILIGLGFSPLAASGLALIANTAPVAYGALGAPIIGLAA HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHCCHHEEECCCCHHHHHHCCHHHHHHH VTGLDLKDLSAMIGRQLPFFSVLVPFWLIWAFAGLRGMLQIWPAILVAGVTFAVPQFLVS HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFHGPWLVDVIAALVSMGSLTLFLKVWKPKSIWTSTALRNHPDTSKVDPEAAAEARAATT CCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AAADAKISRVQAWLPWVILTVFVFIWGVPQFKAFVDGLWQFKLPIPGLDKMVLKGPPVVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHEEECCCCCCCHHHHCCCCCCC KVTAEAAVFTFNVLSMAGTGILASAVVGGLLMGYSVPRMVKEYWNTIKLTRYSLLTICAM CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH FGIGYLTRYSGLDATLGLAFAHTGVLYPLFGTMLGWLGVALTGSDTASNVLFGGLQKTTS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHCCHHHHHH EQLGLSPILMSAANSSGGVMGKMIDAQSIVVASTATKWYGHEGDILRYVFFHSIALAFLV HHHCCCHHHHHCCCCCCCCCEEEECCCCEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHH GLLITLQAYVEPFTRMVVPMAH HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MWNQVYDPLGNAVWSTVAAGLPVAVLLCSLAFFHMQAHLAAGLALLVGVGIAAFVFGMPA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH AMAGKAAGLGIVSGLFPIGWIVLNIIFLHRLTTLNGSFKVLQGSISGITEDRRLQLLLVA HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECHHCCCCCCHHHHHHHHH FSFGAFFEGAAGFGTPVAVTGAILIGLGFSPLAASGLALIANTAPVAYGALGAPIIGLAA HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHCCHHEEECCCCHHHHHHCCHHHHHHH VTGLDLKDLSAMIGRQLPFFSVLVPFWLIWAFAGLRGMLQIWPAILVAGVTFAVPQFLVS HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFHGPWLVDVIAALVSMGSLTLFLKVWKPKSIWTSTALRNHPDTSKVDPEAAAEARAATT CCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AAADAKISRVQAWLPWVILTVFVFIWGVPQFKAFVDGLWQFKLPIPGLDKMVLKGPPVVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHEEECCCCCCCHHHHCCCCCCC KVTAEAAVFTFNVLSMAGTGILASAVVGGLLMGYSVPRMVKEYWNTIKLTRYSLLTICAM CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH FGIGYLTRYSGLDATLGLAFAHTGVLYPLFGTMLGWLGVALTGSDTASNVLFGGLQKTTS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHCCHHHHHH EQLGLSPILMSAANSSGGVMGKMIDAQSIVVASTATKWYGHEGDILRYVFFHSIALAFLV HHHCCCHHHHHCCCCCCCCCEEEECCCCEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHH GLLITLQAYVEPFTRMVVPMAH HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: lactate [Periplasm]; Proton [Periplasm]; glycolate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + lactate [Periplasm] = Proton [Cytoplasm] + lactate [Cytoplasm] Proton [Periplasm] + glycolate [Periplasm] = Proton [Cytoplasm] + glycolate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 11283302; 11785976 [H]