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The map label for this gene is 17545520

Identifier: 17545520

GI number: 17545520

Start: 848744

End: 849481

Strand: Direct

Name: 17545520

Synonym: RSc0801

Alternate gene names: NA

Gene position: 848744-849481 (Clockwise)

Preceding gene: 17545519

Following gene: 17545524

Centisome position: 22.84

GC content: 68.43

Gene sequence:

>738_bases
ATGCCGTTCACTTCCGGAGCCAAACCGATGAAACCGTTCCTTCGCCTGTGCGCGGTCGCGCTGATGGCATGCGCCTGCCT
GCGGCCCGCCGCCGCCGCCGAACCGCAGCCGGGCGCCGGCAAGACCGTGCTGATGGTGGTGCGCATGGAAGGCAAGAGCC
TGCCCATCGACAAGCAGATCGCGGCGCACCTCGAAACGCGCGGCTATGCCGTCACGCTGTACGACCAGTCCCAGCCGACC
GAGCGCGCCAAGGCGTTCGACCTGGTGGTGCTGTCGTCCACCGTGCGTTCGCGCGACCTGCTCGGCGCCTACCGAAACGT
GCCGGTGCCGCTGGTCACGTGGGAGAACGACCTGCTCGACGACATGGCCATGACCGGCAAGCGCCGCGATGTCGACTTCG
GCATGGTCGACAAGGAACACTACCTGTGGATGGTCAATGCGCCGCATCCGCTGTCGGCCGGTTTGCCGGCGGGCGTCGCG
GTCGGCTATGCCAAGGATGCGCCGATGGGCTGGGGCAAGCCGGGCCTGGGCGCGAGCATCATCGCCACGGTGTCGGGCGA
TCCGGCCAAGGCCGTCATCTTCGGCTACGAGAAGGGCGCGACGATGGACTACGAGACGCTCGCCCCGGCGCGCCGCGTGT
TCTTCTTCCTCGACAACGAGACCTTCCCCAACCTGACGCCCGCCGGCCGCAAGCTGTTCGACGCGGCCATCGACTGGGCC
GCGACCGGCGGCAAGTGA

Upstream 100 bases:

>100_bases
ACAACCTGACCGACAAGCGCTACTGGGCGGGTGCCGGCAACAACCGGCTGTCGATGGGCGCGCCGCGCGTGTTCAAGCTG
TCGATGAAGATCGATCTCTG

Downstream 100 bases:

>100_bases
GCGTCCGCGCTACGCCTTTTTGACCGCGCCCAGCATGTCCATCGGCAATGGGAACACGATCGTCGAGCTCTTGTCGCCGG
CGATCTGCGTGAGCGTCTGC

Product: lipoprotein transmembrane

Products: NA

Alternate protein names: Transmembrane Lipoprotein; Thaumatin Pathogenesis-Related Protein; YD Repeat-Containing Protein; Lipoprotein

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MPFTSGAKPMKPFLRLCAVALMACACLRPAAAAEPQPGAGKTVLMVVRMEGKSLPIDKQIAAHLETRGYAVTLYDQSQPT
ERAKAFDLVVLSSTVRSRDLLGAYRNVPVPLVTWENDLLDDMAMTGKRRDVDFGMVDKEHYLWMVNAPHPLSAGLPAGVA
VGYAKDAPMGWGKPGLGASIIATVSGDPAKAVIFGYEKGATMDYETLAPARRVFFFLDNETFPNLTPAGRKLFDAAIDWA
ATGGK

Sequences:

>Translated_245_residues
MPFTSGAKPMKPFLRLCAVALMACACLRPAAAAEPQPGAGKTVLMVVRMEGKSLPIDKQIAAHLETRGYAVTLYDQSQPT
ERAKAFDLVVLSSTVRSRDLLGAYRNVPVPLVTWENDLLDDMAMTGKRRDVDFGMVDKEHYLWMVNAPHPLSAGLPAGVA
VGYAKDAPMGWGKPGLGASIIATVSGDPAKAVIFGYEKGATMDYETLAPARRVFFFLDNETFPNLTPAGRKLFDAAIDWA
ATGGK
>Mature_244_residues
PFTSGAKPMKPFLRLCAVALMACACLRPAAAAEPQPGAGKTVLMVVRMEGKSLPIDKQIAAHLETRGYAVTLYDQSQPTE
RAKAFDLVVLSSTVRSRDLLGAYRNVPVPLVTWENDLLDDMAMTGKRRDVDFGMVDKEHYLWMVNAPHPLSAGLPAGVAV
GYAKDAPMGWGKPGLGASIIATVSGDPAKAVIFGYEKGATMDYETLAPARRVFFFLDNETFPNLTPAGRKLFDAAIDWAA
TGGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26348; Mature: 26217

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFTSGAKPMKPFLRLCAVALMACACLRPAAAAEPQPGAGKTVLMVVRMEGKSLPIDKQI
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHH
AAHLETRGYAVTLYDQSQPTERAKAFDLVVLSSTVRSRDLLGAYRNVPVPLVTWENDLLD
HHHHHCCCEEEEEECCCCCHHHHHHHEEEEEHHHHHHHHHHHHHHCCCEEEEECCHHHHH
DMAMTGKRRDVDFGMVDKEHYLWMVNAPHPLSAGLPAGVAVGYAKDAPMGWGKPGLGASI
HHHHCCCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEE
IATVSGDPAKAVIFGYEKGATMDYETLAPARRVFFFLDNETFPNLTPAGRKLFDAAIDWA
EEEECCCCCEEEEEEECCCCCCCHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
ATGGK
CCCCC
>Mature Secondary Structure 
PFTSGAKPMKPFLRLCAVALMACACLRPAAAAEPQPGAGKTVLMVVRMEGKSLPIDKQI
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHH
AAHLETRGYAVTLYDQSQPTERAKAFDLVVLSSTVRSRDLLGAYRNVPVPLVTWENDLLD
HHHHHCCCEEEEEECCCCCHHHHHHHEEEEEHHHHHHHHHHHHHHCCCEEEEECCHHHHH
DMAMTGKRRDVDFGMVDKEHYLWMVNAPHPLSAGLPAGVAVGYAKDAPMGWGKPGLGASI
HHHHCCCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEE
IATVSGDPAKAVIFGYEKGATMDYETLAPARRVFFFLDNETFPNLTPAGRKLFDAAIDWA
EEEECCCCCEEEEEEECCCCCCCHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
ATGGK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA