| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is tauD [H]
Identifier: 17545465
GI number: 17545465
Start: 791697
End: 792602
Strand: Direct
Name: tauD [H]
Synonym: RSc0746
Alternate gene names: 17545465
Gene position: 791697-792602 (Clockwise)
Preceding gene: 17545464
Following gene: 17545469
Centisome position: 21.3
GC content: 70.09
Gene sequence:
>906_bases ATGTCCGATGCCGTTGCTGTCGCCCCCGAGGCTCCCGCTGTCCACACCCGCCGCTTCCAGGTGCGCCGCCTGCCCGGCGC GCCGCTCGGTGCCGAGATCCTCGGCCTGAACGATGCAGCCGGCCTGTCCGATGCCGACGTCGCCGCCATCCGGCAGGCCT GGCTGGCCCACGATGGCCTGCTGGTGTTCCGCGACGTGCGGCTCGCACCGCGGGCCCAGGTCGATTTCAGCCGGCGCTTC GGGCCGCTGCAGGTGCACGTGCTGAACCAGTTTCACCTGCCGGCGCATCCGGAGATCCTCGTGGTGTCCAATGTGGTCGA GAACGGCAAGCCGATCGGCCTGGGTGATGCGGGCCGGGACTGGCACTCGGACCTGTCCTACAGGCCGCGGCCGAGCCTCG GTTCGCTGCTGCTGGCCCGCGAGCTGCCGCAGGCGGGCGGCGATACGCTGTTCGCCAACATGGTCCGCGCCTACGAGACC CTGCCGGCCGAACTCAAGCACAGCATCGAAGGCCGGCGTGCCGTGCATTCCTACGTGTATCGCTATGAGCGGCTGCGCGC GTTGTCGGCGTGGCGGCCGCCACTGACGCAGGCGCAGCGCGATGCGGTGCCGCCGGTCGATCATCCGGTCGTGCGCACGC ATCCCGAGACGGGCAGGCGCGCCCTGTTCGTCAACGAGGGGTTCACGTCCCGCATCCTGGGCCTGCCGGAAGACGAGAGC ACCACCGTGCTCGCGCAACTCTTCGCCCACAGCATCCGGCCGGACAACATCTACACCCATCGCTGGCAGCCCGGCGACAT GCTGTTCTGGGACAACCGCTCCACCCTCCATTTCGCGCCCGGCTGCCCGGACACGCACCGGCGCACGCTGCATCGCACGA CCATCGAGGGCGACGTGCCCGTCTAG
Upstream 100 bases:
>100_bases GGGCTACAACTGAGTGCGTATCGATCTGCGCTTTCCTTCGTTGGTGCGAGGTGGCGGGCGCGGTCTAATGGGGCATCCGC CGGCTTTTTCCCCATCCACC
Downstream 100 bases:
>100_bases GGTCTAGCGTCCGGCGGCCAGGAGGCGCGCGTGGATCTCCGCCAGCGGCAGCGCCACCGCGAACAGCCGTGCCAGGGACT GGCTTGCGTAGTGCGGCACG
Product: alpha-ketoglutarate-dependent taurine dioxygenase oxidoreductase
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSDAVAVAPEAPAVHTRRFQVRRLPGAPLGAEILGLNDAAGLSDADVAAIRQAWLAHDGLLVFRDVRLAPRAQVDFSRRF GPLQVHVLNQFHLPAHPEILVVSNVVENGKPIGLGDAGRDWHSDLSYRPRPSLGSLLLARELPQAGGDTLFANMVRAYET LPAELKHSIEGRRAVHSYVYRYERLRALSAWRPPLTQAQRDAVPPVDHPVVRTHPETGRRALFVNEGFTSRILGLPEDES TTVLAQLFAHSIRPDNIYTHRWQPGDMLFWDNRSTLHFAPGCPDTHRRTLHRTTIEGDVPV
Sequences:
>Translated_301_residues MSDAVAVAPEAPAVHTRRFQVRRLPGAPLGAEILGLNDAAGLSDADVAAIRQAWLAHDGLLVFRDVRLAPRAQVDFSRRF GPLQVHVLNQFHLPAHPEILVVSNVVENGKPIGLGDAGRDWHSDLSYRPRPSLGSLLLARELPQAGGDTLFANMVRAYET LPAELKHSIEGRRAVHSYVYRYERLRALSAWRPPLTQAQRDAVPPVDHPVVRTHPETGRRALFVNEGFTSRILGLPEDES TTVLAQLFAHSIRPDNIYTHRWQPGDMLFWDNRSTLHFAPGCPDTHRRTLHRTTIEGDVPV >Mature_300_residues SDAVAVAPEAPAVHTRRFQVRRLPGAPLGAEILGLNDAAGLSDADVAAIRQAWLAHDGLLVFRDVRLAPRAQVDFSRRFG PLQVHVLNQFHLPAHPEILVVSNVVENGKPIGLGDAGRDWHSDLSYRPRPSLGSLLLARELPQAGGDTLFANMVRAYETL PAELKHSIEGRRAVHSYVYRYERLRALSAWRPPLTQAQRDAVPPVDHPVVRTHPETGRRALFVNEGFTSRILGLPEDEST TVLAQLFAHSIRPDNIYTHRWQPGDMLFWDNRSTLHFAPGCPDTHRRTLHRTTIEGDVPV
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=281, Percent_Identity=37.3665480427046, Blast_Score=171, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6322971, Length=266, Percent_Identity=28.1954887218045, Blast_Score=96, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 33554; Mature: 33423
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVAVAPEAPAVHTRRFQVRRLPGAPLGAEILGLNDAAGLSDADVAAIRQAWLAHDGL CCCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCE LVFRDVRLAPRAQVDFSRRFGPLQVHVLNQFHLPAHPEILVVSNVVENGKPIGLGDAGRD EEEEECCCCCCCCCCHHHCCCCEEEEEEEEECCCCCCCEEEEEHHHHCCCCCCCCCCCCC WHSDLSYRPRPSLGSLLLARELPQAGGDTLFANMVRAYETLPAELKHSIEGRRAVHSYVY HHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RYERLRALSAWRPPLTQAQRDAVPPVDHPVVRTHPETGRRALFVNEGFTSRILGLPEDES HHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCHHHHCCCCCCCH TTVLAQLFAHSIRPDNIYTHRWQPGDMLFWDNRSTLHFAPGCPDTHRRTLHRTTIEGDVP HHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCEEEECCCCCHHHHHHHHHEECCCCCC V C >Mature Secondary Structure SDAVAVAPEAPAVHTRRFQVRRLPGAPLGAEILGLNDAAGLSDADVAAIRQAWLAHDGL CCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCE LVFRDVRLAPRAQVDFSRRFGPLQVHVLNQFHLPAHPEILVVSNVVENGKPIGLGDAGRD EEEEECCCCCCCCCCHHHCCCCEEEEEEEEECCCCCCCEEEEEHHHHCCCCCCCCCCCCC WHSDLSYRPRPSLGSLLLARELPQAGGDTLFANMVRAYETLPAELKHSIEGRRAVHSYVY HHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RYERLRALSAWRPPLTQAQRDAVPPVDHPVVRTHPETGRRALFVNEGFTSRILGLPEDES HHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCHHHHCCCCCCCH TTVLAQLFAHSIRPDNIYTHRWQPGDMLFWDNRSTLHFAPGCPDTHRRTLHRTTIEGDVP HHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCEEEECCCCCHHHHHHHHHEECCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]