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The map label for this gene is cpaB

Identifier: 17545375

GI number: 17545375

Start: 703843

End: 704709

Strand: Reverse

Name: cpaB

Synonym: RSc0656

Alternate gene names: NA

Gene position: 704709-703843 (Counterclockwise)

Preceding gene: 17545376

Following gene: 17545374

Centisome position: 18.96

GC content: 67.24

Gene sequence:

>867_bases
ATGAAAAACCTGCGCATTCTTTCCATGCTGCTGATCGCCACCATCGCCGGCCTGGCCGCCATGCTCTTCGCATCGCGCTG
GCTGATCCAGCAAGGCAACAGCGGCACCACCAAGGTGGCCGTGGCCGCCGTGGACGTCAACCTGGGCCAGCGCCTGTCGC
CAGAGTTCATCCGACTGGTCGACTGGCCTGCGGCCAGCCTGCCGCCGGGCGCGATCTCGGACGAGCACGCGATCGACGGC
CGGGTCACCCGGACCAGCCTGTCGCCCGGCGAACCGGTGCTGGAATCCAAGCTCACGCCGGTCGGCACCAAGGGCGGGCT
GTCGGCGGTGATCGCCGACGGCAAGCGCGCCATCACCGTGCGCGTGAACGACGTGGTGGGCGTGGCCGGCTTCGCGCTGC
CGGGCAGCTACGTCGACATCATCGTCAACACGCAGCAGGAAACGCCGGACGGCAAGCCCGCCAAGGGTGCGCAGGCCGAC
CGCGAAGAGCATTCGATCTCCAAGATCGTGCTCGAGAAGATCCTGGTGCTGGCCGTGGCTCAGGAGGTCAACCGCGACGA
GACCAAGCCCAAGGTCGTCAACGCCGTCACGCTGGAAGTGACGCCGGATGAGGCCGAGAAGCTCGACCTGGCGCGCAGCG
TGGGCACGCTTTCGCTGGTGCTGCGCAATCAGGTGGATCCGCGTCCGGTCGATACCGCCGGCGCGACCAAGAGCACGCTG
CTCAAGGAACCGGTGGTGGCCACCGTGGCCGTGCCGGTCGTGAAGACCGTGCAAGTCGTCAAGCGCGTCGCCGCCGTGGA
GAGAAAGGCCACCGGCACGTGCATCGGCGTCATCAGCGGCATGCAGCACAACCAGGAATGCTTCTGA

Upstream 100 bases:

>100_bases
CAAGCCAAGGGACGGACCGCCGTGCCGGTCGCGCCTGCATACCCATGACCTGCCGCTGCATCGCGCGTCGGGCCTTTCCA
TGAACGAGGGGGAGTTGGAA

Downstream 100 bases:

>100_bases
ACAACGGGCTCGGAAAAAGACACTGAAGCTGAAGCCGTCACAAGTCCTGCCATGCAGGGATAACCGTCTGGGGGAACATC
ATGGACCGATTCACTGACCA

Product: pilus assembly transmembrane protein

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Flp Pilus Assembly Protein; Flp Pilus Assembly Protein CpaB-Like Protein; Flp Pilus Assembly CpaB Domain Protein; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; CtpC Protein; Pilus Assembly-Related Exported Protein; Pilus Assembly Domain-Containing Protein; Flp Pilus Assembly Protein Cpab; CpaB2 Pilus Assembly Protein; CpaB Family Protein; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; SAF Domain Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKNLRILSMLLIATIAGLAAMLFASRWLIQQGNSGTTKVAVAAVDVNLGQRLSPEFIRLVDWPAASLPPGAISDEHAIDG
RVTRTSLSPGEPVLESKLTPVGTKGGLSAVIADGKRAITVRVNDVVGVAGFALPGSYVDIIVNTQQETPDGKPAKGAQAD
REEHSISKIVLEKILVLAVAQEVNRDETKPKVVNAVTLEVTPDEAEKLDLARSVGTLSLVLRNQVDPRPVDTAGATKSTL
LKEPVVATVAVPVVKTVQVVKRVAAVERKATGTCIGVISGMQHNQECF

Sequences:

>Translated_288_residues
MKNLRILSMLLIATIAGLAAMLFASRWLIQQGNSGTTKVAVAAVDVNLGQRLSPEFIRLVDWPAASLPPGAISDEHAIDG
RVTRTSLSPGEPVLESKLTPVGTKGGLSAVIADGKRAITVRVNDVVGVAGFALPGSYVDIIVNTQQETPDGKPAKGAQAD
REEHSISKIVLEKILVLAVAQEVNRDETKPKVVNAVTLEVTPDEAEKLDLARSVGTLSLVLRNQVDPRPVDTAGATKSTL
LKEPVVATVAVPVVKTVQVVKRVAAVERKATGTCIGVISGMQHNQECF
>Mature_288_residues
MKNLRILSMLLIATIAGLAAMLFASRWLIQQGNSGTTKVAVAAVDVNLGQRLSPEFIRLVDWPAASLPPGAISDEHAIDG
RVTRTSLSPGEPVLESKLTPVGTKGGLSAVIADGKRAITVRVNDVVGVAGFALPGSYVDIIVNTQQETPDGKPAKGAQAD
REEHSISKIVLEKILVLAVAQEVNRDETKPKVVNAVTLEVTPDEAEKLDLARSVGTLSLVLRNQVDPRPVDTAGATKSTL
LKEPVVATVAVPVVKTVQVVKRVAAVERKATGTCIGVISGMQHNQECF

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30382; Mature: 30382

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLRILSMLLIATIAGLAAMLFASRWLIQQGNSGTTKVAVAAVDVNLGQRLSPEFIRLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHHHHEE
DWPAASLPPGAISDEHAIDGRVTRTSLSPGEPVLESKLTPVGTKGGLSAVIADGKRAITV
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCEEEEECCCEEEEE
RVNDVVGVAGFALPGSYVDIIVNTQQETPDGKPAKGAQADREEHSISKIVLEKILVLAVA
EECCEEEEHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QEVNRDETKPKVVNAVTLEVTPDEAEKLDLARSVGTLSLVLRNQVDPRPVDTAGATKSTL
HHHCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
LKEPVVATVAVPVVKTVQVVKRVAAVERKATGTCIGVISGMQHNQECF
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCC
>Mature Secondary Structure
MKNLRILSMLLIATIAGLAAMLFASRWLIQQGNSGTTKVAVAAVDVNLGQRLSPEFIRLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHHHHEE
DWPAASLPPGAISDEHAIDGRVTRTSLSPGEPVLESKLTPVGTKGGLSAVIADGKRAITV
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCEEEEECCCEEEEE
RVNDVVGVAGFALPGSYVDIIVNTQQETPDGKPAKGAQADREEHSISKIVLEKILVLAVA
EECCEEEEHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QEVNRDETKPKVVNAVTLEVTPDEAEKLDLARSVGTLSLVLRNQVDPRPVDTAGATKSTL
HHHCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
LKEPVVATVAVPVVKTVQVVKRVAAVERKATGTCIGVISGMQHNQECF
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA