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The map label for this gene is cpaF1 [C]

Identifier: 17545371

GI number: 17545371

Start: 698866

End: 700227

Strand: Reverse

Name: cpaF1 [C]

Synonym: RSc0652

Alternate gene names: 17545371

Gene position: 700227-698866 (Counterclockwise)

Preceding gene: 17545372

Following gene: 17545370

Centisome position: 18.84

GC content: 66.96

Gene sequence:

>1362_bases
ATGTCATTGCGAGAACAACTCTTCCAGCAGGCGGGCGAATCGATGCCGCAGCGCGTCGCGCATGCCAACGGCTGCGGCGG
CGCCAGCCCGGCCTACCAGCAACTGGCCATCGAGATCCACCAGACCATCATCGACCGCGTGGAGCTGAGCCGGCTGCAGC
AGCTGACCCCGGAGCAGGTCCGGCGCGAACTGGCGCAGCTGGTCGAGCGCATCGTCGAGGAAGGCAACCATCCGGTCAAC
GAGGCCGAGCGCCACCGCCTGGTCTCGGACGTGCAGGACGAAATGCTCGGCTACGGCCCGCTGGAGCCGCTGCTGGCCGA
CCCCACCATCTCCGACATCCTCGTCAATACCTGCAAGCAGGTCTACGTGGAGCGCCGCGGCAAGCTGGAGCTGACCGACG
TGACCTTCCACAACGACGCGCACCTGATGCGCGTGATCGAGAAGATGGTTTCGCGCATGGGCCGGCGCATCGACGAGTCG
AGCCCGATGGTGGATGCGCGCCTGCCCGACGGCTCGCGCATCAACGCCATCATTCCGCCCTCGGCCATCGACGGGCCGCT
GCTGTCGATCCGGCGATTCGCGGTCAACCCGCTCACGGTCAAGGACCTGATCGAGTACAACACCCTCACCCCGCAGATGG
CGCAACTGCTGGAGGCGATGGTCCAGGCCAAGCTCAACATCCTGATCTCGGGCGGCACGGGCAGCGGCAAGACCACGCTG
CTCAACATCCTCTCGGGCTACATTCCGGTCGATGAGCGCGTGGTCACCATCGAAGATGCGGCCGAACTGCAGCTGCGCCA
GCCGCACGTGCTGCGGCTGGAGACCCGCCCGCCCAACATCGAGGGCCGCGGCGAGATCACCCAGCGCTCGCTGGTGAAGA
ACGCCCTGCGCATGCGCCCCGACCGCATCATCCTGGGCGAAGTGCGCGGCGCCGAGGCGCTCGACATGCTCCACGCGATG
AACACCGGCCACGAGGGGTCGCTCGCCACCATCCACGCCAACACCCCGCGCGACGCACTCACGCGGCTGGAGAACATGGT
CAGCATGTCGGGCCTGCAGCTGCCCACCAAGACCATGCGGCAGCAGATCACCTCGGCGCTCTCGGTGGTGGTGCAGGTCA
CGCGCCTGACCGACGGGCGACGCAAGCTGGTCAGCGTGCAGGAGATCACCGGCATGGAAGGCGACATCGTCAACATGCAG
GAGATCTTCACCTTCCGGCGCCGCGGCGTGGACCGCGATGGCCGCATCAAGGGCCATTTCTGCGCCACCGGCGTGCGGCC
CAAGTTCTCGGAGCGCCTGCAGTCGTACGGCATCCAGCTGCCGGAAGCGCTGTTCGACCCCACCGTGATGCACGAAGTCT
AG

Upstream 100 bases:

>100_bases
AGCCTGCTGCGCAAGTTGTTCGGACAAGGCGGCCAAGTGCCCGCAACGGCGCGCGCATGACCGGAACAACCAGGATTCGA
ATTCGAACGGGGGGTGCATC

Downstream 100 bases:

>100_bases
GGAGCCGGCCATGAACACCCTGATGATCGGATTCCTGCTCTCGGTCTTCGTCGCCATCGCGCTGGGCGTGCTCGGCGCCT
ACCAGTGGTGGAGCACGCAC

Product: secretion ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MSLREQLFQQAGESMPQRVAHANGCGGASPAYQQLAIEIHQTIIDRVELSRLQQLTPEQVRRELAQLVERIVEEGNHPVN
EAERHRLVSDVQDEMLGYGPLEPLLADPTISDILVNTCKQVYVERRGKLELTDVTFHNDAHLMRVIEKMVSRMGRRIDES
SPMVDARLPDGSRINAIIPPSAIDGPLLSIRRFAVNPLTVKDLIEYNTLTPQMAQLLEAMVQAKLNILISGGTGSGKTTL
LNILSGYIPVDERVVTIEDAAELQLRQPHVLRLETRPPNIEGRGEITQRSLVKNALRMRPDRIILGEVRGAEALDMLHAM
NTGHEGSLATIHANTPRDALTRLENMVSMSGLQLPTKTMRQQITSALSVVVQVTRLTDGRRKLVSVQEITGMEGDIVNMQ
EIFTFRRRGVDRDGRIKGHFCATGVRPKFSERLQSYGIQLPEALFDPTVMHEV

Sequences:

>Translated_453_residues
MSLREQLFQQAGESMPQRVAHANGCGGASPAYQQLAIEIHQTIIDRVELSRLQQLTPEQVRRELAQLVERIVEEGNHPVN
EAERHRLVSDVQDEMLGYGPLEPLLADPTISDILVNTCKQVYVERRGKLELTDVTFHNDAHLMRVIEKMVSRMGRRIDES
SPMVDARLPDGSRINAIIPPSAIDGPLLSIRRFAVNPLTVKDLIEYNTLTPQMAQLLEAMVQAKLNILISGGTGSGKTTL
LNILSGYIPVDERVVTIEDAAELQLRQPHVLRLETRPPNIEGRGEITQRSLVKNALRMRPDRIILGEVRGAEALDMLHAM
NTGHEGSLATIHANTPRDALTRLENMVSMSGLQLPTKTMRQQITSALSVVVQVTRLTDGRRKLVSVQEITGMEGDIVNMQ
EIFTFRRRGVDRDGRIKGHFCATGVRPKFSERLQSYGIQLPEALFDPTVMHEV
>Mature_452_residues
SLREQLFQQAGESMPQRVAHANGCGGASPAYQQLAIEIHQTIIDRVELSRLQQLTPEQVRRELAQLVERIVEEGNHPVNE
AERHRLVSDVQDEMLGYGPLEPLLADPTISDILVNTCKQVYVERRGKLELTDVTFHNDAHLMRVIEKMVSRMGRRIDESS
PMVDARLPDGSRINAIIPPSAIDGPLLSIRRFAVNPLTVKDLIEYNTLTPQMAQLLEAMVQAKLNILISGGTGSGKTTLL
NILSGYIPVDERVVTIEDAAELQLRQPHVLRLETRPPNIEGRGEITQRSLVKNALRMRPDRIILGEVRGAEALDMLHAMN
TGHEGSLATIHANTPRDALTRLENMVSMSGLQLPTKTMRQQITSALSVVVQVTRLTDGRRKLVSVQEITGMEGDIVNMQE
IFTFRRRGVDRDGRIKGHFCATGVRPKFSERLQSYGIQLPEALFDPTVMHEV

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1786296, Length=162, Percent_Identity=29.6296296296296, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 50614; Mature: 50483

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLREQLFQQAGESMPQRVAHANGCGGASPAYQQLAIEIHQTIIDRVELSRLQQLTPEQV
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RRELAQLVERIVEEGNHPVNEAERHRLVSDVQDEMLGYGPLEPLLADPTISDILVNTCKQ
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHH
VYVERRGKLELTDVTFHNDAHLMRVIEKMVSRMGRRIDESSPMVDARLPDGSRINAIIPP
HHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECC
SAIDGPLLSIRRFAVNPLTVKDLIEYNTLTPQMAQLLEAMVQAKLNILISGGTGSGKTTL
CCCCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHH
LNILSGYIPVDERVVTIEDAAELQLRQPHVLRLETRPPNIEGRGEITQRSLVKNALRMRP
HHHHHCCCCCCCEEEEECCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC
DRIILGEVRGAEALDMLHAMNTGHEGSLATIHANTPRDALTRLENMVSMSGLQLPTKTMR
CEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHH
QQITSALSVVVQVTRLTDGRRKLVSVQEITGMEGDIVNMQEIFTFRRRGVDRDGRIKGHF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEECEE
CATGVRPKFSERLQSYGIQLPEALFDPTVMHEV
ECCCCCHHHHHHHHHCCCCCCHHHCCCHHHHCC
>Mature Secondary Structure 
SLREQLFQQAGESMPQRVAHANGCGGASPAYQQLAIEIHQTIIDRVELSRLQQLTPEQV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RRELAQLVERIVEEGNHPVNEAERHRLVSDVQDEMLGYGPLEPLLADPTISDILVNTCKQ
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHH
VYVERRGKLELTDVTFHNDAHLMRVIEKMVSRMGRRIDESSPMVDARLPDGSRINAIIPP
HHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECC
SAIDGPLLSIRRFAVNPLTVKDLIEYNTLTPQMAQLLEAMVQAKLNILISGGTGSGKTTL
CCCCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHH
LNILSGYIPVDERVVTIEDAAELQLRQPHVLRLETRPPNIEGRGEITQRSLVKNALRMRP
HHHHHCCCCCCCEEEEECCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC
DRIILGEVRGAEALDMLHAMNTGHEGSLATIHANTPRDALTRLENMVSMSGLQLPTKTMR
CEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHH
QQITSALSVVVQVTRLTDGRRKLVSVQEITGMEGDIVNMQEIFTFRRRGVDRDGRIKGHF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEECEE
CATGVRPKFSERLQSYGIQLPEALFDPTVMHEV
ECCCCCHHHHHHHHHCCCCCCHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]