Click here to switch to the map view.

The map label for this gene is 17545370

Identifier: 17545370

GI number: 17545370

Start: 697878

End: 698855

Strand: Reverse

Name: 17545370

Synonym: RSc0651

Alternate gene names: NA

Gene position: 698855-697878 (Counterclockwise)

Preceding gene: 17545371

Following gene: 17545369

Centisome position: 18.8

GC content: 68.4

Gene sequence:

>978_bases
ATGAACACCCTGATGATCGGATTCCTGCTCTCGGTCTTCGTCGCCATCGCGCTGGGCGTGCTCGGCGCCTACCAGTGGTG
GAGCACGCACCGCAGCCAGACCGCGCGGCGCCTCAGCCACCGGCTAGAGACCGCCCTGCTCAACAGCGCGAGCCACAACA
AGGAAGCCAGCATCCTCAAGCAGCGCGTGCTGAGCGACTCGCCGGAGTTCGCCCGGCTGCTGCAGCGCCTGCCGCGCATC
GACATGGTGGACCGCTTCCTGCTGCAATCGGGGCTGGACTGGTCGGTGGGCCGCCTGCTCGGCCTGTCGCTGGCGTCGGC
GGCGATCGTGGGCGGCCTGGTGTGGCTGCTGCACCCGCTGTGGGTGGCGCAGCTGTCCATCACGCTGATGGGCGCGTCGC
TGCCGCTGCTCTACGTGCTGCGCTGCCGCGCCAAACGCCTGCTCAGGCTTGAAGAGCAACTGCCGGAGGCCGCCGACCTG
CTCAGCCGCGCGCTGCGCGCGGGCCATTCGCTGCCCAGCGCGCTCGACATGGCGGGCAGCGAACTGCCGGCCCCGATCGG
CGCCGAGCTGGCGCTGGTCTTCAGCGAGATCAACTACGGCGTGCCGATGAACGACGCGCTCGCCGGCCTGACCGATCGGG
TGCCGATCGAAGACCTGCACTACCTGGTCATCGCCGTGCTGATCCAGCGCGAATCGGGCGGCAACCTGGCCGAGATCCTG
GACAACGTCGGCTCGCTGATCCGCAAGCGCCTGCAGCTGCTGGACAAGGTGCGCGTGCTGTCGGCCGAGGGCCGGATGGG
CGGCTGGATCCTGACGCTGCTGCCGCCGGTGGTCGGGGTCATCGTCTACGAGCTCAATCCCGACCTGATCTCGACGCTGT
GGAAGGACCCCACCGGCCTGAAGATGCTCTGGTACGCCATCACCATGACCTGCGTGGGCGTGATCTGGATCCGCCAGATC
GTGCGCATCCACATCTGA

Upstream 100 bases:

>100_bases
GTGCGGCCCAAGTTCTCGGAGCGCCTGCAGTCGTACGGCATCCAGCTGCCGGAAGCGCTGTTCGACCCCACCGTGATGCA
CGAAGTCTAGGGAGCCGGCC

Downstream 100 bases:

>100_bases
ACGACAACGCAAGCACAGCACGGAGGCGGGACACCCCGCGACGACCATGCACACCGTACACATCGTATTGCTGGCCGGCA
CCTTCGCCATCGTCTTCGGC

Product: tight adherence TadB-related transmembrane protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Integral Membrane Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Type II Secretion System Protein F; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; TadB Protein; Type II Secretion System F Domain; Type II Secretion System; Type II Secretion System Protein F Domain; Tad Secretion System Pilus Assembly Protein; Secretion System Protein; MaoC Protein; Flp Type Pilus Assembly Protein; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Tight Adherence Protein B; Bacterial Type II Secretion System Protein F Domain Protein; Bacterial Type II Secretion System Protein F; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II Secretion System F Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Tight Adherance Operon Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MNTLMIGFLLSVFVAIALGVLGAYQWWSTHRSQTARRLSHRLETALLNSASHNKEASILKQRVLSDSPEFARLLQRLPRI
DMVDRFLLQSGLDWSVGRLLGLSLASAAIVGGLVWLLHPLWVAQLSITLMGASLPLLYVLRCRAKRLLRLEEQLPEAADL
LSRALRAGHSLPSALDMAGSELPAPIGAELALVFSEINYGVPMNDALAGLTDRVPIEDLHYLVIAVLIQRESGGNLAEIL
DNVGSLIRKRLQLLDKVRVLSAEGRMGGWILTLLPPVVGVIVYELNPDLISTLWKDPTGLKMLWYAITMTCVGVIWIRQI
VRIHI

Sequences:

>Translated_325_residues
MNTLMIGFLLSVFVAIALGVLGAYQWWSTHRSQTARRLSHRLETALLNSASHNKEASILKQRVLSDSPEFARLLQRLPRI
DMVDRFLLQSGLDWSVGRLLGLSLASAAIVGGLVWLLHPLWVAQLSITLMGASLPLLYVLRCRAKRLLRLEEQLPEAADL
LSRALRAGHSLPSALDMAGSELPAPIGAELALVFSEINYGVPMNDALAGLTDRVPIEDLHYLVIAVLIQRESGGNLAEIL
DNVGSLIRKRLQLLDKVRVLSAEGRMGGWILTLLPPVVGVIVYELNPDLISTLWKDPTGLKMLWYAITMTCVGVIWIRQI
VRIHI
>Mature_325_residues
MNTLMIGFLLSVFVAIALGVLGAYQWWSTHRSQTARRLSHRLETALLNSASHNKEASILKQRVLSDSPEFARLLQRLPRI
DMVDRFLLQSGLDWSVGRLLGLSLASAAIVGGLVWLLHPLWVAQLSITLMGASLPLLYVLRCRAKRLLRLEEQLPEAADL
LSRALRAGHSLPSALDMAGSELPAPIGAELALVFSEINYGVPMNDALAGLTDRVPIEDLHYLVIAVLIQRESGGNLAEIL
DNVGSLIRKRLQLLDKVRVLSAEGRMGGWILTLLPPVVGVIVYELNPDLISTLWKDPTGLKMLWYAITMTCVGVIWIRQI
VRIHI

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35932; Mature: 35932

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLMIGFLLSVFVAIALGVLGAYQWWSTHRSQTARRLSHRLETALLNSASHNKEASILK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
QRVLSDSPEFARLLQRLPRIDMVDRFLLQSGLDWSVGRLLGLSLASAAIVGGLVWLLHPL
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVAQLSITLMGASLPLLYVLRCRAKRLLRLEEQLPEAADLLSRALRAGHSLPSALDMAGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCC
ELPAPIGAELALVFSEINYGVPMNDALAGLTDRVPIEDLHYLVIAVLIQRESGGNLAEIL
CCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
DNVGSLIRKRLQLLDKVRVLSAEGRMGGWILTLLPPVVGVIVYELNPDLISTLWKDPTGL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCH
KMLWYAITMTCVGVIWIRQIVRIHI
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTLMIGFLLSVFVAIALGVLGAYQWWSTHRSQTARRLSHRLETALLNSASHNKEASILK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
QRVLSDSPEFARLLQRLPRIDMVDRFLLQSGLDWSVGRLLGLSLASAAIVGGLVWLLHPL
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVAQLSITLMGASLPLLYVLRCRAKRLLRLEEQLPEAADLLSRALRAGHSLPSALDMAGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCC
ELPAPIGAELALVFSEINYGVPMNDALAGLTDRVPIEDLHYLVIAVLIQRESGGNLAEIL
CCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
DNVGSLIRKRLQLLDKVRVLSAEGRMGGWILTLLPPVVGVIVYELNPDLISTLWKDPTGL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCH
KMLWYAITMTCVGVIWIRQIVRIHI
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA