| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17545349
Identifier: 17545349
GI number: 17545349
Start: 677809
End: 678165
Strand: Direct
Name: 17545349
Synonym: RSc0630
Alternate gene names: NA
Gene position: 677809-678165 (Clockwise)
Preceding gene: 17545348
Following gene: 17545353
Centisome position: 18.24
GC content: 55.46
Gene sequence:
>357_bases TTGAAGGTTCGCCTGACCACGGTCGACGGCAAGATCATCACTGCGACGCTAAATGACAGCGCGACTGCACAGGACTTTGC CGCGCTGCTTCCGCTGACGTTGTCTCTCGATGACTACGCGGCGACTGAGAAGATTGCCTATTTGCCGAGGAGGCTATCCA CGGCTGGCGTTCCTGATGGTTTCACGCCTTCGGTGGGCGACATCACCTATTACGCCCCTTGGGGCAATCTAGCGATCTTC CACAAGGATTTTCGCTACTCGGAGAAGCTCGTCAGCCTAGGCAAAATCGATTCAGGCATGGAGAGTCTGAGGCGGGGCGA GGTGCTTAAGGTGACGATAGAACGCATTGAGAAATAG
Upstream 100 bases:
>100_bases GGTCGTGCTTTCCCAGGCTCCGCTCTGTGTGGCGGGGGGCGTAACCCAGAAGGCCCGCGCAGCAGAACCCACTGCCGGCG CCGGTCAAGGAGCCATCCAC
Downstream 100 bases:
>100_bases GAGGCGTTTCGCCTCCAGCCCCCTGCTCGAACGTTGGCGTTCTGCTCCGCCCTGAGGGGGCGTAGATTCTCGCGACTCGG TTATCCGGCGGCGCTGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKVRLTTVDGKIITATLNDSATAQDFAALLPLTLSLDDYAATEKIAYLPRRLSTAGVPDGFTPSVGDITYYAPWGNLAIF HKDFRYSEKLVSLGKIDSGMESLRRGEVLKVTIERIEK
Sequences:
>Translated_118_residues MKVRLTTVDGKIITATLNDSATAQDFAALLPLTLSLDDYAATEKIAYLPRRLSTAGVPDGFTPSVGDITYYAPWGNLAIF HKDFRYSEKLVSLGKIDSGMESLRRGEVLKVTIERIEK >Mature_118_residues MKVRLTTVDGKIITATLNDSATAQDFAALLPLTLSLDDYAATEKIAYLPRRLSTAGVPDGFTPSVGDITYYAPWGNLAIF HKDFRYSEKLVSLGKIDSGMESLRRGEVLKVTIERIEK
Specific function: Unknown
COG id: COG4925
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13010; Mature: 13010
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRLTTVDGKIITATLNDSATAQDFAALLPLTLSLDDYAATEKIAYLPRRLSTAGVPDG CEEEEEEECCEEEEEEECCCCCHHHHHHHHCEEECCCCHHHHHHHHHHHHHHCCCCCCCC FTPSVGDITYYAPWGNLAIFHKDFRYSEKLVSLGKIDSGMESLRRGEVLKVTIERIEK CCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHCCCEEEEEEHHHCC >Mature Secondary Structure MKVRLTTVDGKIITATLNDSATAQDFAALLPLTLSLDDYAATEKIAYLPRRLSTAGVPDG CEEEEEEECCEEEEEEECCCCCHHHHHHHHCEEECCCCHHHHHHHHHHHHHHCCCCCCCC FTPSVGDITYYAPWGNLAIFHKDFRYSEKLVSLGKIDSGMESLRRGEVLKVTIERIEK CCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHCCCEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA