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The map label for this gene is tse [H]

Identifier: 17545325

GI number: 17545325

Start: 652660

End: 654513

Strand: Direct

Name: tse [H]

Synonym: RSc0606

Alternate gene names: 17545325

Gene position: 652660-654513 (Clockwise)

Preceding gene: 17545318

Following gene: 17545327

Centisome position: 17.56

GC content: 68.66

Gene sequence:

>1854_bases
GTGGCTGATCCGGCTGCGTGCAGTGCGCTCTACATGGCAGGAACCCATACCGTGCTCAACTCCATCCGTACCCGCATCTT
GCTGACCTGCGTCGCCATCGTGGTGGGCGCATTGACCCTCGCCGGTGGCCTCAACTACGTCGTCACCCGCTCCTACAACG
ACGACGCGATCCGCCAGAACCTGCAGTCCGTCGCACGCGGCCATATCGCCGGCATCGATGACTGGGTGGCGTCCAAGACC
CAGATGGTGGTCGCGCTGCAGGATGCGGCGCTGTCGGCCGATCCGGTGCCGGCCCTCAAGACGGTGGCCGCGTCGGGCGG
CTTCATCAGCGTGTATGTCGGCTACCCCGACAAGTCGTACAAGTTCGCCGACCCGAGCGGGGTTCCACCCACCTACGATC
CGACCGCGCGCCCCTGGTACAAGCAGGCCGCGGAGGCCGGCAAGCCGGTGGTGACGCCGCCCTACGTCAGTGCCAGCACC
GGCAAGCTGGTGGTCACGTTCGCCGTGCCCATCCTGCGCGACGGCGGCCTGAAGGGCGTGGTCGCCAGCGATGTGTCGAT
GGACGCCGTGATCGCCAACGTCAAGGCCATTCACCCGACGCCGGCCAGCTTCGGCTTCCTGGTCAACGCCGCCGGCAAGA
TCGTCGCCCATCCCGATGACAAATTCACGCTCAAGCCGGTCACCGACCTGTCGGCCGACCTGAGCGACGCGACCCTCGCC
GCGCTTGCGCAGACCGACAAGCCGTTGCAGGTCAATGTGGGCGGCGCCGCCAAGCTGCTTCATCGCCAGGGCGTGCAGGG
CACCGACTGGGGCCTGGTGGTGGCGCTCGACAAGTCCGACGCGACCGCCGGCATGCGTTCGCTGGTGACCACGTCGATCG
GCGTGCTGGTGGTGGTGGCGCTGGTGGCGGCCGCCATCGTCGGCGCGATGACGGCGCGCGCGTTCCGCCGCCTGTCGATG
ATCCGCGACGCGATGGACGACATCGGCTCCGGCAGCGGTGACCTCACCAAGCGCCTGCCCGCCGACGGCCAGGACGAAGT
CGCGCAGATCGCCCGCTCGTTCAATGCCTTCGCCGACAAGCTGACCGCGGTGCTGCAGCAGATCCGCCTGGGCAGCGACT
CGGTGCGCTCGGCCGCGCAGGAGATCGCCGCCGGCAACGCCGATCTGTCGCAGCGCACCGAAGAGCAGGCCAGCTCGCTG
GAGGAGACCGCCTCCAGCATGGAAGAGCTGACCAGCATCGTGAAGCAGAACGCCGACAATGCGCGCCAGGCCAGCTCGCT
GGCGGTCAACGCCTCCGACGTGGCGACGCGCGGCGGCAGCGTGGTCGGCCAGGTGGTCCAGACCATGGGCGGCATCAACG
AGAGCAGCAAGAAGATCGCCGACATCATCGGCGTGATCGAGAGCATCGCGTTCCAGACCAACATCCTCGCGCTCAACGCC
GCCGTGGAAGCGGCGCGCGCGGGCGAGCAGGGCCGCGGCTTCGCGGTGGTGGCGAGCGAGGTGCGCAGCCTGGCGCAGCG
CTCGGCGGGCGCGGCCAAGGAGATCAAGGCGCTGATCCACGACTCGGTCGATCGTGTCTCCAACGGCACCGCGCTGGTGG
ACCAGGCCGGCGTGACCATGGCCGAGATCGTCGAGGCCGTGAAGCGCGTGACCGACATCATGGGCGAGATCTCCGCCGCG
TCGGAAGAGCAGAGCAGCGGCATCGAGCAGGTCAACCAGGCCGTCAACCAGATGGATCAGGTGACCCAGCAGAACGCAGC
GCTGGTCGAGCAGGCCGCCGCCGCGGCGGAATCGCTGGAAGAGCAGGCGCGCAACCTGAACGACGCGGTCGGCTCGTTCC
GCCTGTCGCACTGA

Upstream 100 bases:

>100_bases
CCCGCCCGGGCCTGTTTTCCGGGCCTGGGCGGTAGCGTCCCCCAGGCCTCAAAAAAGTTCAAGAAAAGGCGTGGTGGGCC
GTTTTCATGGGACGGACTGC

Downstream 100 bases:

>100_bases
GTGCGGCGCCGGCGGGTTTCAGTTCAGGTGGCGACCGCGCTCAGTTCGGCCGCCAGTGCCTCGTCCAACGCATGGGAGCG
CTGGATGGCCGGCCGCGCCA

Product: methyl-accepting chemotaxis transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 617; Mature: 616

Protein sequence:

>617_residues
MADPAACSALYMAGTHTVLNSIRTRILLTCVAIVVGALTLAGGLNYVVTRSYNDDAIRQNLQSVARGHIAGIDDWVASKT
QMVVALQDAALSADPVPALKTVAASGGFISVYVGYPDKSYKFADPSGVPPTYDPTARPWYKQAAEAGKPVVTPPYVSAST
GKLVVTFAVPILRDGGLKGVVASDVSMDAVIANVKAIHPTPASFGFLVNAAGKIVAHPDDKFTLKPVTDLSADLSDATLA
ALAQTDKPLQVNVGGAAKLLHRQGVQGTDWGLVVALDKSDATAGMRSLVTTSIGVLVVVALVAAAIVGAMTARAFRRLSM
IRDAMDDIGSGSGDLTKRLPADGQDEVAQIARSFNAFADKLTAVLQQIRLGSDSVRSAAQEIAAGNADLSQRTEEQASSL
EETASSMEELTSIVKQNADNARQASSLAVNASDVATRGGSVVGQVVQTMGGINESSKKIADIIGVIESIAFQTNILALNA
AVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKALIHDSVDRVSNGTALVDQAGVTMAEIVEAVKRVTDIMGEISAA
SEEQSSGIEQVNQAVNQMDQVTQQNAALVEQAAAAAESLEEQARNLNDAVGSFRLSH

Sequences:

>Translated_617_residues
MADPAACSALYMAGTHTVLNSIRTRILLTCVAIVVGALTLAGGLNYVVTRSYNDDAIRQNLQSVARGHIAGIDDWVASKT
QMVVALQDAALSADPVPALKTVAASGGFISVYVGYPDKSYKFADPSGVPPTYDPTARPWYKQAAEAGKPVVTPPYVSAST
GKLVVTFAVPILRDGGLKGVVASDVSMDAVIANVKAIHPTPASFGFLVNAAGKIVAHPDDKFTLKPVTDLSADLSDATLA
ALAQTDKPLQVNVGGAAKLLHRQGVQGTDWGLVVALDKSDATAGMRSLVTTSIGVLVVVALVAAAIVGAMTARAFRRLSM
IRDAMDDIGSGSGDLTKRLPADGQDEVAQIARSFNAFADKLTAVLQQIRLGSDSVRSAAQEIAAGNADLSQRTEEQASSL
EETASSMEELTSIVKQNADNARQASSLAVNASDVATRGGSVVGQVVQTMGGINESSKKIADIIGVIESIAFQTNILALNA
AVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKALIHDSVDRVSNGTALVDQAGVTMAEIVEAVKRVTDIMGEISAA
SEEQSSGIEQVNQAVNQMDQVTQQNAALVEQAAAAAESLEEQARNLNDAVGSFRLSH
>Mature_616_residues
ADPAACSALYMAGTHTVLNSIRTRILLTCVAIVVGALTLAGGLNYVVTRSYNDDAIRQNLQSVARGHIAGIDDWVASKTQ
MVVALQDAALSADPVPALKTVAASGGFISVYVGYPDKSYKFADPSGVPPTYDPTARPWYKQAAEAGKPVVTPPYVSASTG
KLVVTFAVPILRDGGLKGVVASDVSMDAVIANVKAIHPTPASFGFLVNAAGKIVAHPDDKFTLKPVTDLSADLSDATLAA
LAQTDKPLQVNVGGAAKLLHRQGVQGTDWGLVVALDKSDATAGMRSLVTTSIGVLVVVALVAAAIVGAMTARAFRRLSMI
RDAMDDIGSGSGDLTKRLPADGQDEVAQIARSFNAFADKLTAVLQQIRLGSDSVRSAAQEIAAGNADLSQRTEEQASSLE
ETASSMEELTSIVKQNADNARQASSLAVNASDVATRGGSVVGQVVQTMGGINESSKKIADIIGVIESIAFQTNILALNAA
VEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKALIHDSVDRVSNGTALVDQAGVTMAEIVEAVKRVTDIMGEISAAS
EEQSSGIEQVNQAVNQMDQVTQQNAALVEQAAAAAESLEEQARNLNDAVGSFRLSH

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=284, Percent_Identity=65.1408450704225, Blast_Score=317, Evalue=2e-87,
Organism=Escherichia coli, GI2367378, Length=339, Percent_Identity=58.1120943952802, Blast_Score=315, Evalue=4e-87,
Organism=Escherichia coli, GI1787690, Length=325, Percent_Identity=55.0769230769231, Blast_Score=305, Evalue=8e-84,
Organism=Escherichia coli, GI1788194, Length=328, Percent_Identity=54.2682926829268, Blast_Score=300, Evalue=2e-82,
Organism=Escherichia coli, GI1789453, Length=237, Percent_Identity=44.7257383966245, Blast_Score=198, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 63928; Mature: 63797

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPAACSALYMAGTHTVLNSIRTRILLTCVAIVVGALTLAGGLNYVVTRSYNDDAIRQN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
LQSVARGHIAGIDDWVASKTQMVVALQDAALSADPVPALKTVAASGGFISVYVGYPDKSY
HHHHHHCCCCCCHHHHHCCHHEEEEEEHHHCCCCCCHHHHHHHCCCCEEEEEEECCCCCC
KFADPSGVPPTYDPTARPWYKQAAEAGKPVVTPPYVSASTGKLVVTFAVPILRDGGLKGV
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCE
VASDVSMDAVIANVKAIHPTPASFGFLVNAAGKIVAHPDDKFTLKPVTDLSADLSDATLA
EECCCHHHHHHHHHHEECCCCCHHHHHHHCCCCEEECCCCCEEECCHHHCCCCCCHHHHH
ALAQTDKPLQVNVGGAAKLLHRQGVQGTDWGLVVALDKSDATAGMRSLVTTSIGVLVVVA
HHHHCCCCEEEECCHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LVAAAIVGAMTARAFRRLSMIRDAMDDIGSGSGDLTKRLPADGQDEVAQIARSFNAFADK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHH
LTAVLQQIRLGSDSVRSAAQEIAAGNADLSQRTEEQASSLEETASSMEELTSIVKQNADN
HHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ARQASSLAVNASDVATRGGSVVGQVVQTMGGINESSKKIADIIGVIESIAFQTNILALNA
HHHHHHHEECHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKALIHDSVDRVSNGTALVDQAGVTM
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEHHHCCCCH
AEIVEAVKRVTDIMGEISAASEEQSSGIEQVNQAVNQMDQVTQQNAALVEQAAAAAESLE
HHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQARNLNDAVGSFRLSH
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ADPAACSALYMAGTHTVLNSIRTRILLTCVAIVVGALTLAGGLNYVVTRSYNDDAIRQN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
LQSVARGHIAGIDDWVASKTQMVVALQDAALSADPVPALKTVAASGGFISVYVGYPDKSY
HHHHHHCCCCCCHHHHHCCHHEEEEEEHHHCCCCCCHHHHHHHCCCCEEEEEEECCCCCC
KFADPSGVPPTYDPTARPWYKQAAEAGKPVVTPPYVSASTGKLVVTFAVPILRDGGLKGV
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCE
VASDVSMDAVIANVKAIHPTPASFGFLVNAAGKIVAHPDDKFTLKPVTDLSADLSDATLA
EECCCHHHHHHHHHHEECCCCCHHHHHHHCCCCEEECCCCCEEECCHHHCCCCCCHHHHH
ALAQTDKPLQVNVGGAAKLLHRQGVQGTDWGLVVALDKSDATAGMRSLVTTSIGVLVVVA
HHHHCCCCEEEECCHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LVAAAIVGAMTARAFRRLSMIRDAMDDIGSGSGDLTKRLPADGQDEVAQIARSFNAFADK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHH
LTAVLQQIRLGSDSVRSAAQEIAAGNADLSQRTEEQASSLEETASSMEELTSIVKQNADN
HHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ARQASSLAVNASDVATRGGSVVGQVVQTMGGINESSKKIADIIGVIESIAFQTNILALNA
HHHHHHHEECHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKALIHDSVDRVSNGTALVDQAGVTM
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEHHHCCCCH
AEIVEAVKRVTDIMGEISAASEEQSSGIEQVNQAVNQMDQVTQQNAALVEQAAAAAESLE
HHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQARNLNDAVGSFRLSH
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]