| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is yeiG [H]
Identifier: 17545323
GI number: 17545323
Start: 650519
End: 651388
Strand: Reverse
Name: yeiG [H]
Synonym: RSc0604
Alternate gene names: 17545323
Gene position: 651388-650519 (Counterclockwise)
Preceding gene: 17545324
Following gene: 17545322
Centisome position: 17.53
GC content: 69.77
Gene sequence:
>870_bases ATGAGCCAATCACCGACACTCGAACTGCTCTCGGAGCACGCCTGCTTCGGCGGCGTGCAGCGCTTTTACCGGCACGCCTC GGCGGCGATCGGGCTGCCGATGCGCTTCTCGGTCTACCTGCCGCCGCAGGCCCTGGCCGGCGAGCGCTGCCCGGCGCTGG TCTACCTCGCCGGGCTGACCTGCACCGAAGAGACCTTCCCGATCAAGGCCGGCGCCCAGCGCATCGCCGCGCGCGAGGGG CTGATCCTGATCGCGCCCGATACCAGTCCGCGCGACGCCAACGTGCCAGGCGAGGCGGACAGCTGGGATTTCGGCGTCGG CGCCGGCTTCTACCTGGATGCGACGCAGGCGCCGTGGCGCGAGCGCTACCGGATGGAGACCTACATCGTCGAGGAGCTGT ACCACATTGCGCGGGTCGCCTTCCCGGTGGCGGCGGGGCGCGTCGGCATCTTCGGGCATTCGATGGGCGGGCACGGTGCG TTGACGCTGGCGCTGCGTCACCGGGAGCGCTTCGCCTCGGTCTCGGCGTTTGCGCCCATTGCGCATCCGTCGGCCTGCCC CTGGGGCGTGAAAGCGTTCACCGGCTACCTCGGCGAGGACCGCACCGCCTGGGCCGCGCACGACGCCACGCGGCTGATGC AACTGGCGAACAACCCGTTTCCTGGCGGCATCCTGATCGATCAAGGCGAGGCGGACACCTTCCTCGCCGAGCAGCTGTAC CCCGATGACTTCGCCGCCGCGTGCGAGGCGGCCGGGCAGCCACTGCAACTGCGCCGCCATCCCGGCTACGACCACGGCTA TTACTTCATCCAGACCTTCATCGAAGACCACCTGCGGCACCACGCGGCACAACTGCGCGGCGTCGGCTAG
Upstream 100 bases:
>100_bases ATCACGCACACGCTGCCGCTCGAGCGCATCAACGAGGGCTTCGACCTGATGAAGCGCGGCGAGTCGATCCGCTCGGTGGT CCTGTACTGAGGAGGGCGCG
Downstream 100 bases:
>100_bases CGAGCGGGGGCGCCGCGCTCAGCGGTTGCCCCAGTCGCCTGTGGTCGCGCCGGTGCCGGGGGCCCCCACCCTGCCATCGC CGGGCGCACCGACCCGCCCA
Product: hydrolase oxidoreductase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSQSPTLELLSEHACFGGVQRFYRHASAAIGLPMRFSVYLPPQALAGERCPALVYLAGLTCTEETFPIKAGAQRIAAREG LILIAPDTSPRDANVPGEADSWDFGVGAGFYLDATQAPWRERYRMETYIVEELYHIARVAFPVAAGRVGIFGHSMGGHGA LTLALRHRERFASVSAFAPIAHPSACPWGVKAFTGYLGEDRTAWAAHDATRLMQLANNPFPGGILIDQGEADTFLAEQLY PDDFAAACEAAGQPLQLRRHPGYDHGYYFIQTFIEDHLRHHAAQLRGVG
Sequences:
>Translated_289_residues MSQSPTLELLSEHACFGGVQRFYRHASAAIGLPMRFSVYLPPQALAGERCPALVYLAGLTCTEETFPIKAGAQRIAAREG LILIAPDTSPRDANVPGEADSWDFGVGAGFYLDATQAPWRERYRMETYIVEELYHIARVAFPVAAGRVGIFGHSMGGHGA LTLALRHRERFASVSAFAPIAHPSACPWGVKAFTGYLGEDRTAWAAHDATRLMQLANNPFPGGILIDQGEADTFLAEQLY PDDFAAACEAAGQPLQLRRHPGYDHGYYFIQTFIEDHLRHHAAQLRGVG >Mature_288_residues SQSPTLELLSEHACFGGVQRFYRHASAAIGLPMRFSVYLPPQALAGERCPALVYLAGLTCTEETFPIKAGAQRIAAREGL ILIAPDTSPRDANVPGEADSWDFGVGAGFYLDATQAPWRERYRMETYIVEELYHIARVAFPVAAGRVGIFGHSMGGHGAL TLALRHRERFASVSAFAPIAHPSACPWGVKAFTGYLGEDRTAWAAHDATRLMQLANNPFPGGILIDQGEADTFLAEQLYP DDFAAACEAAGQPLQLRRHPGYDHGYYFIQTFIEDHLRHHAAQLRGVG
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=284, Percent_Identity=53.5211267605634, Blast_Score=323, Evalue=1e-88, Organism=Escherichia coli, GI1788477, Length=279, Percent_Identity=50.8960573476703, Blast_Score=275, Evalue=2e-75, Organism=Escherichia coli, GI1786551, Length=280, Percent_Identity=46.7857142857143, Blast_Score=263, Evalue=8e-72, Organism=Caenorhabditis elegans, GI17510185, Length=283, Percent_Identity=46.643109540636, Blast_Score=259, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6322393, Length=296, Percent_Identity=38.1756756756757, Blast_Score=193, Evalue=3e-50, Organism=Drosophila melanogaster, GI45551932, Length=287, Percent_Identity=49.1289198606272, Blast_Score=287, Evalue=5e-78, Organism=Drosophila melanogaster, GI24648347, Length=282, Percent_Identity=49.645390070922, Blast_Score=283, Evalue=7e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31583; Mature: 31452
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSPTLELLSEHACFGGVQRFYRHASAAIGLPMRFSVYLPPQALAGERCPALVYLAGLT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHCCCCCCEEEEEECCE CTEETFPIKAGAQRIAAREGLILIAPDTSPRDANVPGEADSWDFGVGAGFYLDATQAPWR ECCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHH ERYRMETYIVEELYHIARVAFPVAAGRVGIFGHSMGGHGALTLALRHRERFASVSAFAPI HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHCCC AHPSACPWGVKAFTGYLGEDRTAWAAHDATRLMQLANNPFPGGILIDQGEADTFLAEQLY CCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHCC PDDFAAACEAAGQPLQLRRHPGYDHGYYFIQTFIEDHLRHHAAQLRGVG CCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQSPTLELLSEHACFGGVQRFYRHASAAIGLPMRFSVYLPPQALAGERCPALVYLAGLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHCCCCCCEEEEEECCE CTEETFPIKAGAQRIAAREGLILIAPDTSPRDANVPGEADSWDFGVGAGFYLDATQAPWR ECCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHH ERYRMETYIVEELYHIARVAFPVAAGRVGIFGHSMGGHGALTLALRHRERFASVSAFAPI HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHCCC AHPSACPWGVKAFTGYLGEDRTAWAAHDATRLMQLANNPFPGGILIDQGEADTFLAEQLY CCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHCC PDDFAAACEAAGQPLQLRRHPGYDHGYYFIQTFIEDHLRHHAAQLRGVG CCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA